BLASTX nr result

ID: Ophiopogon24_contig00013299 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00013299
         (912 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020081813.1| probable ribosomal protein S11, mitochondria...    75   1e-12
gb|AAP76372.1| small subunit ribosomal protein, partial (mitocho...    65   3e-09
gb|AAP76368.1| small subunit ribosomal protein, partial (mitocho...    63   9e-09
gb|AAP76367.1| small subunit ribosomal protein, partial (mitocho...    63   9e-09
gb|AAP76366.1| small subunit ribosomal protein, partial (mitocho...    63   9e-09
gb|AAP76369.1| small subunit ribosomal protein, partial (mitocho...    62   3e-08
gb|AAP76370.1| small subunit ribosomal protein, partial (mitocho...    59   2e-07
ref|XP_020571678.1| probable ribosomal protein S11, mitochondria...    60   3e-07
gb|AAP76365.1| small subunit ribosomal protein, partial (mitocho...    57   1e-06

>ref|XP_020081813.1| probable ribosomal protein S11, mitochondrial [Ananas comosus]
          Length = 188

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 40/51 (78%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = +2

Query: 761 KTTANTDRLGLA-GAGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           KT A TDRLGLA GAGS KSMNFVQSI EED+Q SR+ KRDFVHVLL +KK
Sbjct: 20  KTRAETDRLGLAAGAGSLKSMNFVQSISEEDKQCSRKKKRDFVHVLLMKKK 70


>gb|AAP76372.1| small subunit ribosomal protein, partial (mitochondrion) [Juncus
           sp. Qiu 94042]
          Length = 126

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSF+SMNFV+SILEEDEQSSR+ KRDFVHVLL +KK
Sbjct: 1   AGSFQSMNFVKSILEEDEQSSRKKKRDFVHVLLMKKK 37


>gb|AAP76368.1| small subunit ribosomal protein, partial (mitochondrion) [Dracaena
           fragrans]
          Length = 126

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSFKSMNFVQSI EEDEQ SR+ KRDFVHVLL +KK
Sbjct: 1   AGSFKSMNFVQSISEEDEQCSRKKKRDFVHVLLIKKK 37


>gb|AAP76367.1| small subunit ribosomal protein, partial (mitochondrion) [Prosartes
           hookeri]
          Length = 126

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSFKSMNFVQSI EEDEQ SR+ KRDFVHVLL +KK
Sbjct: 1   AGSFKSMNFVQSISEEDEQCSRKKKRDFVHVLLIKKK 37


>gb|AAP76366.1| small subunit ribosomal protein, partial (mitochondrion) [Hosta sp.
           Qiu 94191]
          Length = 126

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSFKSMNFVQSI EEDEQ SR+ KRDFVHVLL +KK
Sbjct: 1   AGSFKSMNFVQSISEEDEQCSRKKKRDFVHVLLIKKK 37


>gb|AAP76369.1| small subunit ribosomal protein, partial (mitochondrion) [Typha sp.
           Qiu 94061]
          Length = 126

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSFKSMNFVQSI EEDEQ SR+  RDFVHVLL +KK
Sbjct: 1   AGSFKSMNFVQSISEEDEQCSRKKNRDFVHVLLMKKK 37


>gb|AAP76370.1| small subunit ribosomal protein, partial (mitochondrion) [Cocos
           nucifera]
          Length = 126

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSFKSMNFVQSI EEDEQ SR+  RDFVHVLL + K
Sbjct: 1   AGSFKSMNFVQSISEEDEQCSRKKNRDFVHVLLIKNK 37


>ref|XP_020571678.1| probable ribosomal protein S11, mitochondrial [Phalaenopsis
           equestris]
          Length = 174

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +2

Query: 782 RLGLAGAGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           RLGLAG G+FK +NFVQSI EEDEQ SR+   +FVHVLL +KK
Sbjct: 54  RLGLAGDGNFKFINFVQSISEEDEQCSRKKNINFVHVLLIKKK 96


>gb|AAP76365.1| small subunit ribosomal protein, partial (mitochondrion) [Pandanus
           tectorius]
          Length = 126

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = +2

Query: 800 AGSFKSMNFVQSILEEDEQSSRENKRDFVHVLLSRKK 910
           AGSFKSMNFVQSI EEDEQ SR+   DFVHVLL + K
Sbjct: 1   AGSFKSMNFVQSISEEDEQCSRKKNTDFVHVLLIKNK 37


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