BLASTX nr result
ID: Ophiopogon24_contig00013220
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00013220
(396 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020276474.1| putative E3 ubiquitin-protein ligase LIN-1 i... 138 3e-35
ref|XP_020276473.1| putative E3 ubiquitin-protein ligase LIN-1 i... 138 3e-35
ref|XP_019710509.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 4e-14
ref|XP_019710508.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 4e-14
ref|XP_010938388.2| PREDICTED: putative E3 ubiquitin-protein lig... 78 4e-14
ref|XP_008789861.2| PREDICTED: putative E3 ubiquitin-protein lig... 78 5e-14
ref|XP_010921672.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ... 74 1e-12
ref|XP_017697411.1| PREDICTED: putative E3 ubiquitin-protein lig... 70 2e-11
ref|XP_008784743.1| PREDICTED: putative E3 ubiquitin-protein lig... 70 3e-11
gb|OAY79454.1| putative E3 ubiquitin-protein ligase LIN-1, parti... 70 3e-11
ref|XP_020086306.1| putative E3 ubiquitin-protein ligase LIN-1 i... 69 5e-11
ref|XP_020086304.1| putative E3 ubiquitin-protein ligase LIN-1 i... 69 5e-11
gb|OAY65169.1| putative E3 ubiquitin-protein ligase LIN-1, parti... 67 2e-10
ref|XP_009411673.2| PREDICTED: putative E3 ubiquitin-protein lig... 64 4e-09
gb|KXG21827.1| hypothetical protein SORBI_3009G112800 [Sorghum b... 56 2e-06
ref|XP_021303598.1| putative E3 ubiquitin-protein ligase LIN-1 i... 56 2e-06
gb|OQU77857.1| hypothetical protein SORBI_3009G112800 [Sorghum b... 56 2e-06
gb|OQU77854.1| hypothetical protein SORBI_3009G112800 [Sorghum b... 56 2e-06
gb|OQU77856.1| hypothetical protein SORBI_3009G112800 [Sorghum b... 56 2e-06
ref|XP_021303597.1| putative E3 ubiquitin-protein ligase LIN-1 i... 56 2e-06
>ref|XP_020276474.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Asparagus
officinalis]
Length = 1057
Score = 138 bits (348), Expect = 3e-35
Identities = 68/113 (60%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +3
Query: 60 RRHLPENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSN-SSKY 236
R++LPEN +SD RW MQA++CKA+T S LLPSRS+ST+SN+NFSI+DL +SN SS+Y
Sbjct: 106 RKYLPENTVSDTSRWPMQAQNCKANT-SCLLPSRSYSTVSNLNFSILDLKGMESNASSRY 164
Query: 237 YIEEEAFPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
YIEEE PG+PST++IRC +SLH+LVH G+FARK+INVSS++K
Sbjct: 165 YIEEEISPGKPSTHEIRCFRSFSSKFRKKHSLHELVHHGNFARKRINVSSNDK 217
>ref|XP_020276473.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Asparagus
officinalis]
gb|ONK62926.1| uncharacterized protein A4U43_C07F9550 [Asparagus officinalis]
Length = 1300
Score = 138 bits (348), Expect = 3e-35
Identities = 68/113 (60%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +3
Query: 60 RRHLPENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSN-SSKY 236
R++LPEN +SD RW MQA++CKA+T S LLPSRS+ST+SN+NFSI+DL +SN SS+Y
Sbjct: 349 RKYLPENTVSDTSRWPMQAQNCKANT-SCLLPSRSYSTVSNLNFSILDLKGMESNASSRY 407
Query: 237 YIEEEAFPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
YIEEE PG+PST++IRC +SLH+LVH G+FARK+INVSS++K
Sbjct: 408 YIEEEISPGKPSTHEIRCFRSFSSKFRKKHSLHELVHHGNFARKRINVSSNDK 460
>ref|XP_019710509.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 isoform X3
[Elaeis guineensis]
Length = 1145
Score = 78.2 bits (191), Expect = 4e-14
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Frame = +3
Query: 90 DVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADS----NSSKYYIEEEAF 257
D P ++M + C+A+ S LL SRSHS+++N+ FSI+DL A++ N S +E+E
Sbjct: 479 DCPSYSMHVQVCEANA-SCLLSSRSHSSLNNLRFSILDLRDAETYPLFNCS---VEDETP 534
Query: 258 PGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
GR T+D+RC YS+ +LV RGS A++K+N S+SEK
Sbjct: 535 TGRSPTHDLRCFSNFSSKFRKKYSISELVPRGSIAKRKVNFSNSEK 580
>ref|XP_019710508.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Elaeis guineensis]
Length = 1161
Score = 78.2 bits (191), Expect = 4e-14
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Frame = +3
Query: 90 DVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADS----NSSKYYIEEEAF 257
D P ++M + C+A+ S LL SRSHS+++N+ FSI+DL A++ N S +E+E
Sbjct: 220 DCPSYSMHVQVCEANA-SCLLSSRSHSSLNNLRFSILDLRDAETYPLFNCS---VEDETP 275
Query: 258 PGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
GR T+D+RC YS+ +LV RGS A++K+N S+SEK
Sbjct: 276 TGRSPTHDLRCFSNFSSKFRKKYSISELVPRGSIAKRKVNFSNSEK 321
>ref|XP_010938388.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Elaeis guineensis]
Length = 1420
Score = 78.2 bits (191), Expect = 4e-14
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Frame = +3
Query: 90 DVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADS----NSSKYYIEEEAF 257
D P ++M + C+A+ S LL SRSHS+++N+ FSI+DL A++ N S +E+E
Sbjct: 479 DCPSYSMHVQVCEANA-SCLLSSRSHSSLNNLRFSILDLRDAETYPLFNCS---VEDETP 534
Query: 258 PGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
GR T+D+RC YS+ +LV RGS A++K+N S+SEK
Sbjct: 535 TGRSPTHDLRCFSNFSSKFRKKYSISELVPRGSIAKRKVNFSNSEK 580
>ref|XP_008789861.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Phoenix
dactylifera]
Length = 1331
Score = 77.8 bits (190), Expect = 5e-14
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KIIPIKFSYSQTVDCYRRHLP--------ENPISDVPRWAMQAESCKADTTSYLLPSRSH 167
KI+ + +S + R +LP E P D P ++M E C+A LL SRSH
Sbjct: 356 KILTMYADHSASNSGERNYLPNCSPPECLETPPPDCPSYSMHVEVCEA-IAGCLLSSRSH 414
Query: 168 STISNINFSIMDLNRADSNS-SKYYIEEEAFPGRPSTYDIRCXXXXXXXXXXXYSLHDLV 344
S+ +N+ FSI+DL ++ S +E+ GR T+D+RC +S+ + V
Sbjct: 415 SSPNNLRFSILDLRDVETYPFSNCSVEDGTPTGRSPTHDLRCFSNFSSKFRKKHSISEFV 474
Query: 345 HRGSFARKKINVSSSEK 395
RGSFAR+KIN S+SEK
Sbjct: 475 PRGSFARRKINFSNSEK 491
>ref|XP_010921672.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein
ligase LIN-1 [Elaeis guineensis]
Length = 1327
Score = 73.9 bits (180), Expect = 1e-12
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYY-IEE 248
PE+ D P ++M E CKA+ S L SRSHS+++++ FS++DL ++ Y +E+
Sbjct: 381 PESYAVDSPSYSMNVEVCKANA-SCLFSSRSHSSLNDLKFSMLDLRDVETCPFSYCSVED 439
Query: 249 EAFPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
PG +D++C Y + + V +GSFARKKIN S+SEK
Sbjct: 440 GTPPGSSPPHDLKCFSSFSSKFKRKYHISEAVPQGSFARKKINFSNSEK 488
>ref|XP_017697411.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Phoenix dactylifera]
Length = 1241
Score = 70.1 bits (170), Expect = 2e-11
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +3
Query: 90 DVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEEAFP-GR 266
D P ++M E CKA+ LL SRSHS+++++ FSI+D ++ Y E+ P G
Sbjct: 301 DSPSYSMNLEVCKANANC-LLSSRSHSSLNDLRFSILDRGDGETCPFSYCSVEDGTPSGS 359
Query: 267 PSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
D+RC YS+ + V RGSFAR+KIN S++EK
Sbjct: 360 SPPQDLRCFSNFSSKFRRKYSISEAVPRGSFARRKINFSNNEK 402
>ref|XP_008784743.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Phoenix dactylifera]
Length = 1328
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +3
Query: 90 DVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEEAFP-GR 266
D P ++M E CKA+ LL SRSHS+++++ FSI+D ++ Y E+ P G
Sbjct: 388 DSPSYSMNLEVCKANANC-LLSSRSHSSLNDLRFSILDRGDGETCPFSYCSVEDGTPSGS 446
Query: 267 PSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
D+RC YS+ + V RGSFAR+KIN S++EK
Sbjct: 447 SPPQDLRCFSNFSSKFRRKYSISEAVPRGSFARRKINFSNNEK 489
>gb|OAY79454.1| putative E3 ubiquitin-protein ligase LIN-1, partial [Ananas
comosus]
Length = 1313
Score = 69.7 bits (169), Expect = 3e-11
Identities = 42/100 (42%), Positives = 59/100 (59%)
Frame = +3
Query: 96 PRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEEAFPGRPST 275
P++ + ES + +T SYLL SRS ++SN+ SI+D + S KY ++EE P
Sbjct: 394 PKYPVHEESFEPNT-SYLLSSRSQGSLSNLQNSILDFREVEPYSFKYGVKEETNRESPPR 452
Query: 276 YDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
+++RC YSL +LV RGSFARK I+ SSSEK
Sbjct: 453 HNLRC---FSKMFLKKYSLSELVSRGSFARKIISFSSSEK 489
>ref|XP_020086306.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Ananas
comosus]
Length = 1313
Score = 69.3 bits (168), Expect = 5e-11
Identities = 42/100 (42%), Positives = 59/100 (59%)
Frame = +3
Query: 96 PRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEEAFPGRPST 275
P++ + ES + +T SYLL SRS ++SN+ SI+D + S KY ++EE P
Sbjct: 389 PKYPVHEESFEPNT-SYLLSSRSQGSLSNLQNSILDFREVEPYSFKYGVKEETNRESPLR 447
Query: 276 YDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
+++RC YSL +LV RGSFARK I+ SSSEK
Sbjct: 448 HNLRC---FSKMFLKKYSLSELVSRGSFARKIISFSSSEK 484
>ref|XP_020086304.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Ananas
comosus]
Length = 1318
Score = 69.3 bits (168), Expect = 5e-11
Identities = 42/100 (42%), Positives = 59/100 (59%)
Frame = +3
Query: 96 PRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEEAFPGRPST 275
P++ + ES + +T SYLL SRS ++SN+ SI+D + S KY ++EE P
Sbjct: 394 PKYPVHEESFEPNT-SYLLSSRSQGSLSNLQNSILDFREVEPYSFKYGVKEETNRESPLR 452
Query: 276 YDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
+++RC YSL +LV RGSFARK I+ SSSEK
Sbjct: 453 HNLRC---FSKMFLKKYSLSELVSRGSFARKIISFSSSEK 489
>gb|OAY65169.1| putative E3 ubiquitin-protein ligase LIN-1, partial [Ananas
comosus]
Length = 783
Score = 67.4 bits (163), Expect = 2e-10
Identities = 39/86 (45%), Positives = 51/86 (59%)
Frame = +3
Query: 138 TSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEEAFPGRPSTYDIRCXXXXXXXXX 317
TSYLL SRS ++SN+ SI+D + S KY ++EE P +++RC
Sbjct: 9 TSYLLSSRSQGSLSNLQNSILDFREVEPYSFKYGVKEETNRESPPRHNLRC---FSKMFL 65
Query: 318 XXYSLHDLVHRGSFARKKINVSSSEK 395
YSL +LV RGSFARK I+ SSSEK
Sbjct: 66 KKYSLSELVSRGSFARKIISFSSSEK 91
>ref|XP_009411673.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Musa
acuminata subsp. malaccensis]
Length = 1396
Score = 63.9 bits (154), Expect = 4e-09
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +3
Query: 96 PRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNS-SKYYIEEEAFPGRPS 272
P + E +A+ S+ RSH ++SN+ FS++D+ +++ YY+++ PGR
Sbjct: 457 PGYPADKEDYEANA-SFQSSRRSHCSLSNLKFSVLDVKEVETHPFCNYYVKKGMSPGRSP 515
Query: 273 TYDIRCXXXXXXXXXXXYSLHDLVHRGSFARKKINVSSSEK 395
+D+RC Y+L +LV RGS+AR++ N +SEK
Sbjct: 516 KHDLRCFSTFSARLRKRYNLSELVSRGSYARRRRNFPTSEK 556
>gb|KXG21827.1| hypothetical protein SORBI_3009G112800 [Sorghum bicolor]
Length = 1013
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEE 251
PEN + P M ++ L +RSH +++N++ S+++L ADS S+ Y ++
Sbjct: 66 PENAMIYAPESPMYKVDDHEMKSNCLQSNRSHGSLNNLSNSVLELKNADSYSTSNYSAKD 125
Query: 252 A-FPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARK 368
A FP YD+RC SL DLV RGS +RK
Sbjct: 126 AMFPQCSPRYDLRCFSTFSTKFIKKSSLSDLVSRGSMSRK 165
>ref|XP_021303598.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Sorghum
bicolor]
Length = 1093
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEE 251
PEN + P M ++ L +RSH +++N++ S+++L ADS S+ Y ++
Sbjct: 381 PENAMIYAPESPMYKVDDHEMKSNCLQSNRSHGSLNNLSNSVLELKNADSYSTSNYSAKD 440
Query: 252 A-FPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARK 368
A FP YD+RC SL DLV RGS +RK
Sbjct: 441 AMFPQCSPRYDLRCFSTFSTKFIKKSSLSDLVSRGSMSRK 480
>gb|OQU77857.1| hypothetical protein SORBI_3009G112800 [Sorghum bicolor]
Length = 1327
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEE 251
PEN + P M ++ L +RSH +++N++ S+++L ADS S+ Y ++
Sbjct: 380 PENAMIYAPESPMYKVDDHEMKSNCLQSNRSHGSLNNLSNSVLELKNADSYSTSNYSAKD 439
Query: 252 A-FPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARK 368
A FP YD+RC SL DLV RGS +RK
Sbjct: 440 AMFPQCSPRYDLRCFSTFSTKFIKKSSLSDLVSRGSMSRK 479
>gb|OQU77854.1| hypothetical protein SORBI_3009G112800 [Sorghum bicolor]
Length = 1328
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEE 251
PEN + P M ++ L +RSH +++N++ S+++L ADS S+ Y ++
Sbjct: 381 PENAMIYAPESPMYKVDDHEMKSNCLQSNRSHGSLNNLSNSVLELKNADSYSTSNYSAKD 440
Query: 252 A-FPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARK 368
A FP YD+RC SL DLV RGS +RK
Sbjct: 441 AMFPQCSPRYDLRCFSTFSTKFIKKSSLSDLVSRGSMSRK 480
>gb|OQU77856.1| hypothetical protein SORBI_3009G112800 [Sorghum bicolor]
Length = 1334
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEE 251
PEN + P M ++ L +RSH +++N++ S+++L ADS S+ Y ++
Sbjct: 380 PENAMIYAPESPMYKVDDHEMKSNCLQSNRSHGSLNNLSNSVLELKNADSYSTSNYSAKD 439
Query: 252 A-FPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARK 368
A FP YD+RC SL DLV RGS +RK
Sbjct: 440 AMFPQCSPRYDLRCFSTFSTKFIKKSSLSDLVSRGSMSRK 479
>ref|XP_021303597.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Sorghum
bicolor]
gb|OQU77855.1| hypothetical protein SORBI_3009G112800 [Sorghum bicolor]
Length = 1335
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 72 PENPISDVPRWAMQAESCKADTTSYLLPSRSHSTISNINFSIMDLNRADSNSSKYYIEEE 251
PEN + P M ++ L +RSH +++N++ S+++L ADS S+ Y ++
Sbjct: 381 PENAMIYAPESPMYKVDDHEMKSNCLQSNRSHGSLNNLSNSVLELKNADSYSTSNYSAKD 440
Query: 252 A-FPGRPSTYDIRCXXXXXXXXXXXYSLHDLVHRGSFARK 368
A FP YD+RC SL DLV RGS +RK
Sbjct: 441 AMFPQCSPRYDLRCFSTFSTKFIKKSSLSDLVSRGSMSRK 480