BLASTX nr result
ID: Ophiopogon24_contig00013108
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00013108
(585 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020241493.1| E3 ubiquitin-protein ligase RMA3-like [Aspar... 99 7e-26
ref|XP_008810454.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 78 4e-19
ref|XP_010934828.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 76 1e-17
ref|XP_009386065.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 80 1e-16
ref|XP_009386066.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 80 1e-16
ref|XP_009382772.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 83 6e-16
gb|KMZ61284.1| RING finger protein 5 [Zostera marina] 83 7e-16
ref|XP_009383780.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-... 83 8e-16
ref|XP_015169680.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 1e-15
ref|XP_004251854.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 1e-15
ref|XP_015059368.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 1e-15
ref|XP_015059369.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 1e-15
ref|XP_006358981.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 1e-15
ref|XP_004251855.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 1e-15
ref|XP_022036014.1| E3 ubiquitin-protein ligase RMA1H1-like [Hel... 81 2e-15
ref|XP_009411542.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 80 2e-15
ref|XP_010918493.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 82 2e-15
ref|XP_008778990.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-... 82 2e-15
gb|AQK45017.1| E3 ubiquitin-protein ligase RMA1 [Zea mays] 76 2e-15
ref|XP_020400707.1| ring domain containing protein isoform X1 [Z... 76 2e-15
>ref|XP_020241493.1| E3 ubiquitin-protein ligase RMA3-like [Asparagus officinalis]
ref|XP_020241501.1| E3 ubiquitin-protein ligase RMA3-like [Asparagus officinalis]
gb|ONK79699.1| uncharacterized protein A4U43_C01F9140 [Asparagus officinalis]
Length = 227
Score = 98.6 bits (244), Expect(2) = 7e-26
Identities = 46/80 (57%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 213 MEAEGTVMGRFDESMNKSFAHQERXXXXXXXXXXXXXXXXXXXX-CFDCSICLDFAVDPV 389
ME EGT M FD S NKSF HQE+ CFDCSICLD AVDPV
Sbjct: 1 MEPEGTTMNLFDNSTNKSFPHQEQSRRTHLTDSSASSDTRASANTCFDCSICLDSAVDPV 60
Query: 390 VTLCGHLYCWPCMYKWLQVE 449
VT CGHLYCWPC+YKWL+V+
Sbjct: 61 VTFCGHLYCWPCIYKWLKVD 80
Score = 46.6 bits (109), Expect(2) = 7e-26
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRD 549
PLYGRGSSNLT K K LDIP RP +L D
Sbjct: 101 PLYGRGSSNLTPKSKTLDIPKRPVILGD 128
>ref|XP_008810454.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Phoenix
dactylifera]
ref|XP_008810455.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Phoenix
dactylifera]
Length = 254
Score = 77.8 bits (190), Expect(2) = 4e-19
Identities = 36/79 (45%), Positives = 45/79 (56%)
Frame = +3
Query: 213 MEAEGTVMGRFDESMNKSFAHQERXXXXXXXXXXXXXXXXXXXXCFDCSICLDFAVDPVV 392
MEAEGT+ G ES + ++ CFDC+ICLDF +PVV
Sbjct: 1 MEAEGTMQGYIKESQVEKEPSKK---------CRVDAPLPSANSCFDCNICLDFVSEPVV 51
Query: 393 TLCGHLYCWPCMYKWLQVE 449
TLCGHL+CWPC+YKWL V+
Sbjct: 52 TLCGHLFCWPCIYKWLHVQ 70
Score = 44.7 bits (104), Expect(2) = 4e-19
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRD--AIASVIDEQHSS 585
PLYGRG N D+ L+IP+RP++ RD I+SVI+ Q SS
Sbjct: 91 PLYGRGLGNKKESDRSLEIPHRPSIYRDHALISSVIEHQSSS 132
>ref|XP_010934828.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Elaeis
guineensis]
Length = 253
Score = 75.9 bits (185), Expect(2) = 1e-17
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLDF +PVVTLCGHLYCW C+YKWLQV+
Sbjct: 36 CFDCNICLDFVSEPVVTLCGHLYCWSCIYKWLQVQ 70
Score = 42.0 bits (97), Expect(2) = 1e-17
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRD--AIASVIDEQHS 582
PLYG G SN D+ L+IP+RP++ +D IASVI+ Q S
Sbjct: 91 PLYGHGPSNKKESDQNLNIPHRPSIYQDHALIASVIEHQSS 131
>ref|XP_009386065.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 232
Score = 80.5 bits (197), Expect(2) = 1e-16
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFA DPVVTLCGHLYCWPC+YKWLQ
Sbjct: 33 CFDCNICLDFAADPVVTLCGHLYCWPCIYKWLQ 65
Score = 33.9 bits (76), Expect(2) = 1e-16
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRDAI 555
PLYGRG S +A+ + LDIP RP+ R+AI
Sbjct: 92 PLYGRGHSTKSAQ-QSLDIPRRPSFPREAI 120
>ref|XP_009386066.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X2 [Musa
acuminata subsp. malaccensis]
ref|XP_009386068.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X2 [Musa
acuminata subsp. malaccensis]
ref|XP_009386069.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X2 [Musa
acuminata subsp. malaccensis]
ref|XP_018676916.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 231
Score = 80.5 bits (197), Expect(2) = 1e-16
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFA DPVVTLCGHLYCWPC+YKWLQ
Sbjct: 32 CFDCNICLDFAADPVVTLCGHLYCWPCIYKWLQ 64
Score = 33.9 bits (76), Expect(2) = 1e-16
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRDAI 555
PLYGRG S +A+ + LDIP RP+ R+AI
Sbjct: 91 PLYGRGHSTKSAQ-QSLDIPRRPSFPREAI 119
>ref|XP_009382772.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Musa acuminata
subsp. malaccensis]
ref|XP_009382773.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Musa acuminata
subsp. malaccensis]
ref|XP_009382774.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Musa acuminata
subsp. malaccensis]
Length = 225
Score = 82.8 bits (203), Expect = 6e-16
Identities = 31/35 (88%), Positives = 35/35 (100%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDCSICL+FAVDPVVTLCGHLYCWPC++KW+QVE
Sbjct: 18 CFDCSICLEFAVDPVVTLCGHLYCWPCIFKWMQVE 52
>gb|KMZ61284.1| RING finger protein 5 [Zostera marina]
Length = 235
Score = 82.8 bits (203), Expect = 7e-16
Identities = 31/35 (88%), Positives = 35/35 (100%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICL+FAVDPVVTLCGHLYCWPC+YKWL+VE
Sbjct: 40 CFDCNICLEFAVDPVVTLCGHLYCWPCIYKWLEVE 74
>ref|XP_009383780.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-like [Musa acuminata
subsp. malaccensis]
Length = 261
Score = 83.2 bits (204), Expect = 8e-16
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLDF VDPVVTLCGHLYCWPC+YKW+QVE
Sbjct: 47 CFDCNICLDFVVDPVVTLCGHLYCWPCIYKWMQVE 81
>ref|XP_015169680.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum tuberosum]
Length = 271
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLD A DPVVTLCGHLYCWPC+YKWLQVE
Sbjct: 54 CFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVE 88
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDK----GLDIPNRPAVLR 546
PLYGRG S+L ++ K +DIP+RP +R
Sbjct: 114 PLYGRGISSLESEPKKAQADVDIPHRPRAIR 144
>ref|XP_004251854.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X1
[Solanum lycopersicum]
Length = 271
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLD A DPVVTLCGHLYCWPC+YKWLQVE
Sbjct: 54 CFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVE 88
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDK----GLDIPNRPAVLR 546
PLYGRG S+L ++ K +DIP+RP +R
Sbjct: 114 PLYGRGISSLESEPKKDQADVDIPHRPRAIR 144
>ref|XP_015059368.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X1
[Solanum pennellii]
Length = 263
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLD A DPVVTLCGHLYCWPC+YKWLQVE
Sbjct: 46 CFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVE 80
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDK----GLDIPNRPAVLR 546
PLYGRG S+L ++ K +DIP+RP +R
Sbjct: 106 PLYGRGISSLESEPKKDQADVDIPHRPRAIR 136
>ref|XP_015059369.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum pennellii]
ref|XP_015059370.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum pennellii]
ref|XP_015059371.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum pennellii]
ref|XP_015059372.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum pennellii]
Length = 250
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLD A DPVVTLCGHLYCWPC+YKWLQVE
Sbjct: 33 CFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVE 67
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDK----GLDIPNRPAVLR 546
PLYGRG S+L ++ K +DIP+RP +R
Sbjct: 93 PLYGRGISSLESEPKKDQADVDIPHRPRAIR 123
>ref|XP_006358981.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X1
[Solanum tuberosum]
Length = 250
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLD A DPVVTLCGHLYCWPC+YKWLQVE
Sbjct: 33 CFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVE 67
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDK----GLDIPNRPAVLR 546
PLYGRG S+L ++ K +DIP+RP +R
Sbjct: 93 PLYGRGISSLESEPKKAQADVDIPHRPRAIR 123
>ref|XP_004251855.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum lycopersicum]
ref|XP_019067158.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2
[Solanum lycopersicum]
Length = 250
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVE 449
CFDC+ICLD A DPVVTLCGHLYCWPC+YKWLQVE
Sbjct: 33 CFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVE 67
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDK----GLDIPNRPAVLR 546
PLYGRG S+L ++ K +DIP+RP +R
Sbjct: 93 PLYGRGISSLESEPKKDQADVDIPHRPRAIR 123
>ref|XP_022036014.1| E3 ubiquitin-protein ligase RMA1H1-like [Helianthus annuus]
gb|OTG29602.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
Length = 212
Score = 81.3 bits (199), Expect = 2e-15
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQVEXXXXXXPL 473
CFDCSICLDFA DPVVTLCGHLYCWPC+YKWL + PL
Sbjct: 23 CFDCSICLDFAKDPVVTLCGHLYCWPCIYKWLSFQTDSDNNPL 65
>ref|XP_009411542.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Musa acuminata
subsp. malaccensis]
Length = 184
Score = 80.5 bits (197), Expect = 2e-15
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFA +PVVTLCGHLYCWPCMYKWLQ
Sbjct: 17 CFDCNICLDFAAEPVVTLCGHLYCWPCMYKWLQ 49
>ref|XP_010918493.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Elaeis guineensis]
ref|XP_010918494.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Elaeis guineensis]
Length = 259
Score = 82.0 bits (201), Expect = 2e-15
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFAVDPVVTLCGHLYCWPC+YKWLQ
Sbjct: 41 CFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQ 73
>ref|XP_008778990.1| PREDICTED: E3 ubiquitin-protein ligase RMA1-like [Phoenix
dactylifera]
Length = 263
Score = 82.0 bits (201), Expect = 2e-15
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFAVDPVVTLCGHLYCWPC+YKWLQ
Sbjct: 41 CFDCNICLDFAVDPVVTLCGHLYCWPCIYKWLQ 73
>gb|AQK45017.1| E3 ubiquitin-protein ligase RMA1 [Zea mays]
Length = 318
Score = 75.9 bits (185), Expect(2) = 2e-15
Identities = 27/33 (81%), Positives = 32/33 (96%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFA +PVVTLCGHLYCWPC+Y+WL+
Sbjct: 99 CFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLR 131
Score = 33.9 bits (76), Expect(2) = 2e-15
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRDAI-----ASVIDEQH 579
PLYGRG S+ + D G+ IP RP V R+A+ S +++QH
Sbjct: 163 PLYGRGGSSKKSLD-GMAIPRRPMVHREAVEQQNARSHVNDQH 204
>ref|XP_020400707.1| ring domain containing protein isoform X1 [Zea mays]
Length = 317
Score = 75.9 bits (185), Expect(2) = 2e-15
Identities = 27/33 (81%), Positives = 32/33 (96%)
Frame = +3
Query: 345 CFDCSICLDFAVDPVVTLCGHLYCWPCMYKWLQ 443
CFDC+ICLDFA +PVVTLCGHLYCWPC+Y+WL+
Sbjct: 98 CFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLR 130
Score = 33.9 bits (76), Expect(2) = 2e-15
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Frame = +1
Query: 466 PLYGRGSSNLTAKDKGLDIPNRPAVLRDAI-----ASVIDEQH 579
PLYGRG S+ + D G+ IP RP V R+A+ S +++QH
Sbjct: 162 PLYGRGGSSKKSLD-GMAIPRRPMVHREAVEQQNARSHVNDQH 203