BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00012366
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020275808.1| exosome complex component RRP41-like [Aspara...    55   2e-06
ref|XP_009390309.1| PREDICTED: exosome complex component RRP41-l...    54   5e-06
ref|XP_012064793.1| exosome complex component RRP41-like [Jatrop...    54   5e-06

>ref|XP_020275808.1| exosome complex component RRP41-like [Asparagus officinalis]
          Length = 254

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -1

Query: 397 KINEAMELCLDACSKLAIIMRSCLKECVSS 308
           KINEAM+LCLDACSKLA IMRSCLKE VSS
Sbjct: 225 KINEAMDLCLDACSKLAGIMRSCLKESVSS 254


>ref|XP_009390309.1| PREDICTED: exosome complex component RRP41-like [Musa acuminata
           subsp. malaccensis]
          Length = 255

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -1

Query: 397 KINEAMELCLDACSKLAIIMRSCLKECVS 311
           KINEAMELCLDACSKLA IMRSCLKE  S
Sbjct: 224 KINEAMELCLDACSKLAEIMRSCLKEAAS 252


>ref|XP_012064793.1| exosome complex component RRP41-like [Jatropha curcas]
 ref|XP_020532676.1| exosome complex component RRP41-like [Jatropha curcas]
 gb|KDP44031.1| hypothetical protein JCGZ_05498 [Jatropha curcas]
          Length = 256

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -1

Query: 397 KINEAMELCLDACSKLAIIMRSCLKECVSS 308
           K+NEAM+LCLDACSKLA IMRSCLKE  SS
Sbjct: 224 KMNEAMQLCLDACSKLATIMRSCLKEAASS 253