BLASTX nr result

ID: Ophiopogon24_contig00012240 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00012240
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK58747.1| uncharacterized protein A4U43_C09F16240 [Asparagu...    55   8e-07

>gb|ONK58747.1| uncharacterized protein A4U43_C09F16240 [Asparagus officinalis]
          Length = 115

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
 Frame = +2

Query: 107 RSHYR--VKFFXXXXXXXXXXXXXXXXTQITRT------QHDGPRFPNLQMLFKSRQAA- 259
           +SHYR  VKFF                   TRT      +++GPRFPNL M+FK ++ A 
Sbjct: 4   QSHYRRSVKFFDESQASETDHHQIQTAAS-TRTDQNISSKYEGPRFPNLHMMFKHKETAT 62

Query: 260 ---EEDGTVVNRSXXXXXXXXXXXXXXXXXXXXGNVDMDAGEYIRRRHQNYLQRLASMN 427
              +    V+ RS                     N+DM+A EYI+R+HQ+Y QRL +M+
Sbjct: 63  TQQDHHPVVIERSVETVEKTRSHEEK--------NIDMEADEYIKRKHQSYYQRLMTMD 113


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