BLASTX nr result

ID: Ophiopogon24_contig00012219 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00012219
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013732971.1| serine hydroxymethyltransferase 1, mitochond...    58   7e-07
ref|XP_011457613.1| PREDICTED: LOW QUALITY PROTEIN: serine hydro...    58   8e-07
ref|XP_011468925.1| PREDICTED: LOW QUALITY PROTEIN: serine hydro...    58   8e-07
ref|XP_024185583.1| serine hydroxymethyltransferase, mitochondri...    58   8e-07
ref|XP_023634102.1| serine hydroxymethyltransferase 1, mitochond...    58   8e-07
ref|XP_018469682.1| PREDICTED: serine hydroxymethyltransferase 1...    58   8e-07
ref|XP_013607410.1| PREDICTED: serine hydroxymethyltransferase 1...    58   8e-07
ref|XP_013629760.1| PREDICTED: serine hydroxymethyltransferase 1...    58   8e-07
ref|XP_009109405.1| PREDICTED: serine hydroxymethyltransferase 1...    58   8e-07
ref|XP_013685553.1| serine hydroxymethyltransferase 1, mitochond...    58   8e-07
ref|XP_013723039.1| serine hydroxymethyltransferase 1, mitochond...    58   8e-07
ref|XP_013656577.1| serine hydroxymethyltransferase 1, mitochond...    58   8e-07
ref|XP_013629759.1| PREDICTED: serine hydroxymethyltransferase 1...    58   8e-07
gb|EOA16298.1| hypothetical protein CARUB_v10004441mg, partial [...    58   8e-07
ref|XP_008384294.1| PREDICTED: serine hydroxymethyltransferase, ...    57   9e-07
gb|KDO78683.1| hypothetical protein CISIN_1g018231mg [Citrus sin...    57   2e-06
gb|KDO78682.1| hypothetical protein CISIN_1g018231mg [Citrus sin...    57   2e-06
gb|KDO78680.1| hypothetical protein CISIN_1g018231mg [Citrus sin...    57   2e-06
gb|KDO78681.1| hypothetical protein CISIN_1g018231mg [Citrus sin...    57   2e-06
gb|ESR39464.1| hypothetical protein CICLE_v10025372mg [Citrus cl...    57   3e-06

>ref|XP_013732971.1| serine hydroxymethyltransferase 1, mitochondrial-like [Brassica
           napus]
          Length = 396

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_011457613.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 439

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LEAVDPEI DIIEHEKARQWKGLELIP
Sbjct: 54  APLEAVDPEIADIIEHEKARQWKGLELIP 82


>ref|XP_011468925.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LEAVDPEI DIIEHEKARQWKGLELIP
Sbjct: 54  APLEAVDPEIADIIEHEKARQWKGLELIP 82


>ref|XP_024185583.1| serine hydroxymethyltransferase, mitochondrial [Rosa chinensis]
 ref|XP_024185584.1| serine hydroxymethyltransferase, mitochondrial [Rosa chinensis]
 gb|PRQ48381.1| putative glycine hydroxymethyltransferase [Rosa chinensis]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LEAVDPEI DIIEHEKARQWKGLELIP
Sbjct: 54  APLEAVDPEIADIIEHEKARQWKGLELIP 82


>ref|XP_023634102.1| serine hydroxymethyltransferase 1, mitochondrial [Capsella rubella]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_018469682.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial
           [Raphanus sativus]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_013607410.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial
           [Brassica oleracea var. oleracea]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_013629760.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial isoform
           X2 [Brassica oleracea var. oleracea]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_009109405.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial
           [Brassica rapa]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_013685553.1| serine hydroxymethyltransferase 1, mitochondrial [Brassica napus]
 emb|CDY49684.1| BnaC03g61150D [Brassica napus]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_013723039.1| serine hydroxymethyltransferase 1, mitochondrial [Brassica napus]
          Length = 517

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_013656577.1| serine hydroxymethyltransferase 1, mitochondrial-like [Brassica
           napus]
          Length = 519

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 53  ASLEEVDPEIADIIEHEKARQWKGLELIP 81


>ref|XP_013629759.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial isoform
           X1 [Brassica oleracea var. oleracea]
          Length = 523

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 59  ASLEEVDPEIADIIEHEKARQWKGLELIP 87


>gb|EOA16298.1| hypothetical protein CARUB_v10004441mg, partial [Capsella rubella]
          Length = 583

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           ASLE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 119 ASLEEVDPEIADIIEHEKARQWKGLELIP 147


>ref|XP_008384294.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Malus domestica]
          Length = 190

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LEAVDPEI DIIEHEK RQWKGLELIP
Sbjct: 52  APLEAVDPEIADIIEHEKTRQWKGLELIP 80


>gb|KDO78683.1| hypothetical protein CISIN_1g018231mg [Citrus sinensis]
          Length = 286

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 25  APLEVVDPEIADIIEHEKARQWKGLELIP 53


>gb|KDO78682.1| hypothetical protein CISIN_1g018231mg [Citrus sinensis]
          Length = 295

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 25  APLEVVDPEIADIIEHEKARQWKGLELIP 53


>gb|KDO78680.1| hypothetical protein CISIN_1g018231mg [Citrus sinensis]
          Length = 356

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 25  APLEVVDPEIADIIEHEKARQWKGLELIP 53


>gb|KDO78681.1| hypothetical protein CISIN_1g018231mg [Citrus sinensis]
          Length = 359

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 25  APLEVVDPEIADIIEHEKARQWKGLELIP 53


>gb|ESR39464.1| hypothetical protein CICLE_v10025372mg [Citrus clementina]
          Length = 477

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 401 ASLEAVDPEIVDIIEHEKARQWKGLELIP 487
           A LE VDPEI DIIEHEKARQWKGLELIP
Sbjct: 54  APLEVVDPEIADIIEHEKARQWKGLELIP 82


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