BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00012203
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   234   7e-70
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...   229   4e-69
emb|CDP17739.1| unnamed protein product [Coffea canephora]            224   4e-69
emb|CDP17738.1| unnamed protein product [Coffea canephora]            224   3e-66
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   227   4e-66
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          192   5e-54
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote...   180   1e-53
gb|ONK68536.1| uncharacterized protein A4U43_C05F12960 [Asparagu...   175   3e-53
gb|OAE20507.1| hypothetical protein AXG93_948s1140 [Marchantia p...   181   7e-53
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   185   5e-52
gb|KYP37885.1| Retrovirus-related Pol polyprotein from transposo...   179   2e-51
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   185   3e-51
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            183   6e-51
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   184   7e-51
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   184   1e-50
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   184   1e-50
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         183   1e-50
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                        183   1e-50
gb|AOZ57162.1| integrase, partial [Coccinia grandis]                  170   2e-50
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   183   2e-50

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  234 bits (598), Expect = 7e-70
 Identities = 104/161 (64%), Positives = 135/161 (83%), Gaps = 3/161 (1%)
 Frame = -1

Query: 476 VTGALAASVD---RDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLG 306
           V G +AA+     +D + ++LWHMRLGH  EKSLQ L+KQGLLKG   CK++FCEHCVLG
Sbjct: 339 VVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLG 398

Query: 305 KKTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKS 126
           K+ RVKFGTA+H T+GILDYVH+DVWGP+K  S+GG++YFV+FVDD+SRR WV+ +K+K+
Sbjct: 399 KQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKN 458

Query: 125 DVLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           DVLE+F++WK  VE  TGRKIK+L++DNGGE+KSDPFL +C
Sbjct: 459 DVLEIFLKWKAEVENHTGRKIKVLQTDNGGEYKSDPFLNVC 499


>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score =  229 bits (584), Expect = 4e-69
 Identities = 107/155 (69%), Positives = 130/155 (83%)
 Frame = -1

Query: 467 ALAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVK 288
           ALA S   + D S+LWH RLGHTSE SLQ L KQ LLKGA + K++FCEHCVLGKKT+VK
Sbjct: 362 ALAIS---EADISKLWHYRLGHTSENSLQILCKQRLLKGAKSGKIEFCEHCVLGKKTKVK 418

Query: 287 FGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVF 108
           FGT++HQT GI+DY+HTDVWG +K+ SLGG+++FV+FVDDYSR  WVY +  KS+VL++F
Sbjct: 419 FGTSIHQTRGIMDYMHTDVWGLTKNVSLGGQHWFVTFVDDYSRHCWVYTMTKKSEVLDIF 478

Query: 107 VEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           VEWK+ +ELQTGRKIK LRSDNGGE+ SDPF QLC
Sbjct: 479 VEWKKRLELQTGRKIKTLRSDNGGEYTSDPFQQLC 513


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score =  224 bits (571), Expect = 4e-69
 Identities = 97/152 (63%), Positives = 128/152 (84%)
 Frame = -1

Query: 461 AASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVKFG 282
           ++S  +D + ++LWHMRLGH  EKSLQNL+KQGLLKG   CK++FCEHCVL K+ +VKFG
Sbjct: 41  SSSSKKDAEATKLWHMRLGHAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFG 100

Query: 281 TAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVFVE 102
           T +H T+GILDYVH++VWGP+K  SLGG+ YFV+F+DD+SRR WV+ +K K +VLE+F++
Sbjct: 101 TGIHNTKGILDYVHSNVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLK 160

Query: 101 WKRNVELQTGRKIKMLRSDNGGEFKSDPFLQL 6
           WK  VE QTGRKIK+LR+DNGGE+KSDPF ++
Sbjct: 161 WKARVENQTGRKIKILRTDNGGEYKSDPFQKI 192


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  224 bits (572), Expect = 3e-66
 Identities = 97/155 (62%), Positives = 129/155 (83%)
 Frame = -1

Query: 467 ALAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVK 288
           A ++S  +D + ++LWHMRLG   EKSLQNL+KQGLLKG   CK++FCEHCVL K+ +VK
Sbjct: 431 ATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVK 490

Query: 287 FGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVF 108
           FGT +H T+GILDYVH+DVWGP+K  SLGG+ YFV+F+DD+SRR WV+ +K K ++L++F
Sbjct: 491 FGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIF 550

Query: 107 VEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           ++WK  VE QTGRKIK+LR+DNGGE+KSDPF ++C
Sbjct: 551 LKWKARVENQTGRKIKILRTDNGGEYKSDPFQKIC 585


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  227 bits (578), Expect = 4e-66
 Identities = 100/157 (63%), Positives = 129/157 (82%)
 Frame = -1

Query: 473 TGALAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTR 294
           T A+A+S ++++++++LWHMRLGH  E+SL  L KQGLLK    CK+DFCEHCV GKKTR
Sbjct: 192 TAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFCEHCVKGKKTR 251

Query: 293 VKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLE 114
           VKFGTA+H T+GILDYVH+DVWGPSK  SL G +Y+V+FVDD+SRR WVYA+K K +VL 
Sbjct: 252 VKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLG 311

Query: 113 VFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           +F++WK+ +E QTGRKIK  R+DNGGE+ SDPF + C
Sbjct: 312 IFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKAC 348


>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  192 bits (488), Expect = 5e-54
 Identities = 86/152 (56%), Positives = 112/152 (73%)
 Frame = -1

Query: 458 ASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVKFGT 279
           ASV+ D D ++LWH+RLGH SE+ +  L K+ LLKG  +CK+D C++CVLGK+ RV+F  
Sbjct: 332 ASVESDNDATKLWHLRLGHLSERGMMELHKRSLLKGVCSCKMDLCKYCVLGKQCRVRFKP 391

Query: 278 AVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVFVEW 99
             H+TEGILDYVH+DVWGP++  S+GG  YFV+F DD+SR+ WVY +K KS+V   F  W
Sbjct: 392 MKHKTEGILDYVHSDVWGPTREASMGGSRYFVTFTDDFSRKLWVYFMKQKSEVFSKFKLW 451

Query: 98  KRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           K  VE QTGRKIK LRSDNG E+ +  F + C
Sbjct: 452 KAEVENQTGRKIKYLRSDNGTEYTNSQFEKFC 483


>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
           [Trifolium pratense]
          Length = 285

 Score =  180 bits (456), Expect = 1e-53
 Identities = 85/161 (52%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
 Frame = -1

Query: 476 VTGALAASVDRDVDTS---RLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLG 306
           VTG LA  ++R  D +   R+WHMRLGH SEK L  L ++GLLK      ++FCEHCV G
Sbjct: 40  VTGDLAVGINRSKDQTECTRMWHMRLGHMSEKGLSLLGEKGLLKNMEKPCMEFCEHCVYG 99

Query: 305 KKTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKS 126
           K  R++F ++ H++ GILDYVHTDVWGP+  TS GG  YFV++VDD+SR  W+Y +KHK+
Sbjct: 100 KAHRLRFSSSKHKSRGILDYVHTDVWGPAPVTSKGGSRYFVTYVDDHSRYAWIYFLKHKN 159

Query: 125 DVLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           +V + F  WK  VE +TGRK+K LRSDNG E+    F + C
Sbjct: 160 EVFDNFKCWKAMVENRTGRKLKTLRSDNGTEYTDGAFKRFC 200


>gb|ONK68536.1| uncharacterized protein A4U43_C05F12960 [Asparagus officinalis]
          Length = 165

 Score =  175 bits (444), Expect = 3e-53
 Identities = 83/148 (56%), Positives = 104/148 (70%), Gaps = 2/148 (1%)
 Frame = -1

Query: 476 VTGALA--ASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGK 303
           VTGA A  +S D D D + LWHMRLGH SE+ L  LSKQGLL G  T K+DF EHCV GK
Sbjct: 17  VTGAAAVSSSEDSDSDITHLWHMRLGHMSERGLDILSKQGLLCGQKTSKLDFYEHCVFGK 76

Query: 302 KTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSD 123
             RV F T V +T+G LDY+H+D+WGP +  S GG  + ++ +DDYSR+ WVY +KHKSD
Sbjct: 77  HHRVSFSTGVRRTKGTLDYIHSDIWGPFQVPSKGGARFLLTLIDDYSRKVWVYPLKHKSD 136

Query: 122 VLEVFVEWKRNVELQTGRKIKMLRSDNG 39
           V   F +WK  +E Q G+K+K LR+DNG
Sbjct: 137 VFATFKQWKVMIEKQRGKKVKNLRTDNG 164


>gb|OAE20507.1| hypothetical protein AXG93_948s1140 [Marchantia polymorpha subsp.
           ruderalis]
          Length = 386

 Score =  181 bits (459), Expect = 7e-53
 Identities = 86/158 (54%), Positives = 109/158 (68%)
 Frame = -1

Query: 476 VTGALAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKT 297
           +TG  A +  RDV+ SRLWH+RLGH SE+ +  L+KQG L       +DFCE C+ GK  
Sbjct: 76  ITGHTAVA-SRDVN-SRLWHLRLGHVSERGMTELAKQGFLDDESITALDFCEECIYGKAC 133

Query: 296 RVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVL 117
           R KFG  +H++E ILDYVHTD+WGP+K  S GG  Y++S VDDYSRR WVY +K K++ L
Sbjct: 134 RAKFGKGIHRSEAILDYVHTDLWGPAKVPSHGGSRYYMSIVDDYSRRLWVYLLKQKNEAL 193

Query: 116 EVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
           + F  WK  VE QTG+K+K LRSDNG EF S+ F   C
Sbjct: 194 DSFKTWKTLVETQTGKKVKKLRSDNGLEFCSEQFDSFC 231


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  185 bits (469), Expect = 5e-52
 Identities = 85/159 (53%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
 Frame = -1

Query: 476 VTGALAASVDR-DVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKK 300
           VTG+ A S    D D ++LWHMRLGH SEK +  LSKQGLL   G  K++FCEHCV GK+
Sbjct: 402 VTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQ 461

Query: 299 TRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDV 120
            RV F TA H+T+G LDY+H+D+WGPSK  S GG  Y ++ +DD+SR+ WVY ++HK++ 
Sbjct: 462 KRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNET 521

Query: 119 LEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
              F +WK  VE QTG+K+K LR+DNG EF    F + C
Sbjct: 522 FPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFC 560


>gb|KYP37885.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 464

 Score =  179 bits (455), Expect = 2e-51
 Identities = 75/151 (49%), Positives = 107/151 (70%)
 Frame = -1

Query: 455 SVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVKFGTA 276
           ++    ++ RLWH+RL H SEK L+ L KQGLLKG    K+DFCEHC+ GK+ R KF  +
Sbjct: 80  TIVNSANSIRLWHLRLSHISEKGLEELHKQGLLKGTNYEKLDFCEHCLYGKQERAKFPAS 139

Query: 275 VHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVFVEWK 96
            H T+GILDYVH+D+WGP+K  S+GG  Y++SF+DD+S + W+Y + HK+   ++F +WK
Sbjct: 140 THNTKGILDYVHSDIWGPTKTQSIGGVRYYISFIDDWSTKMWIYLLNHKNQAFKIFKQWK 199

Query: 95  RNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
             VE Q G+++K+L  DNG E+ SD F + C
Sbjct: 200 ALVETQIGKQVKVLSIDNGLEYLSDEFNEFC 230


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  185 bits (469), Expect = 3e-51
 Identities = 85/159 (53%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
 Frame = -1

Query: 476 VTGALAASVDR-DVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKK 300
           VTG+ A S    D D ++LWHMRLGH SEK +  LSKQGLL   G  K++FCEHCV GK+
Sbjct: 106 VTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQ 165

Query: 299 TRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDV 120
            RV F TA H+T+G LDY+H+D+WGPSK  S GG  Y ++ +DD+SR+ WVY ++HK++ 
Sbjct: 166 KRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNET 225

Query: 119 LEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
              F +WK  VE QTG+K+K LR+DNG EF    F + C
Sbjct: 226 FPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFC 264


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  183 bits (464), Expect = 6e-51
 Identities = 88/160 (55%), Positives = 108/160 (67%), Gaps = 2/160 (1%)
 Frame = -1

Query: 476 VTGALAASVDR--DVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGK 303
           + G +AA  D   + D + LWHMRLGH SE  L  LSK+GLL G    K+ FCEHC+ GK
Sbjct: 382 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGK 441

Query: 302 KTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSD 123
             RVKF T+ H TEGILDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KHK  
Sbjct: 442 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQ 501

Query: 122 VLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
             +VF EWK  VE QT RK+K+LR+DNG EF S  F   C
Sbjct: 502 AFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYC 541


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  184 bits (467), Expect = 7e-51
 Identities = 83/158 (52%), Positives = 110/158 (69%)
 Frame = -1

Query: 476 VTGALAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKT 297
           VTG ++  +  DV T++LWH RLGH S + LQ L KQG+L       + FCEHCV GK T
Sbjct: 376 VTGKVSTVLKEDVGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKAT 435

Query: 296 RVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVL 117
           RVKF  A+H+T+  LDY+H+D+WGPS+  S+GG  YF++ +DDYSR+ W+Y +K+KS+  
Sbjct: 436 RVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETF 495

Query: 116 EVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
             F EWK  VE QT RK+K LR+DNG EF S+ F  LC
Sbjct: 496 LKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLC 533


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  184 bits (466), Expect = 1e-50
 Identities = 88/160 (55%), Positives = 116/160 (72%), Gaps = 2/160 (1%)
 Frame = -1

Query: 476  VTGA--LAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGK 303
            VTG   +++S D D DT++LWHMRLGH SE+ L  LSK+GLL G  T K++FCEHCV GK
Sbjct: 923  VTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGK 982

Query: 302  KTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSD 123
            +TRVKF T +H+T+G +DY H+D+WGPS   S GG  Y ++F+DDYSR+ WVY +K K +
Sbjct: 983  QTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYE 1042

Query: 122  VLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
            VL  F ++K  +E QTG+KIK  R+DNG EF S  F + C
Sbjct: 1043 VLINFKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFC 1082


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  184 bits (466), Expect = 1e-50
 Identities = 88/160 (55%), Positives = 116/160 (72%), Gaps = 2/160 (1%)
 Frame = -1

Query: 476  VTGA--LAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGK 303
            VTG   +++S D D DT++LWHMRLGH SE+ L  LSK+GLL G  T K++FCEHCV GK
Sbjct: 902  VTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGK 961

Query: 302  KTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSD 123
            +TRVKF T +H+T+G +DY H+D+WGPS   S GG  Y ++F+DDYSR+ WVY +K K +
Sbjct: 962  QTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYE 1021

Query: 122  VLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
            VL  F ++K  +E QTG+KIK  R+DNG EF S  F + C
Sbjct: 1022 VLINFKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFC 1061


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  183 bits (465), Expect = 1e-50
 Identities = 88/160 (55%), Positives = 108/160 (67%), Gaps = 2/160 (1%)
 Frame = -1

Query: 476 VTGALAASVDR--DVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGK 303
           + G +AA  D   + D + LWHMRLGH SE  L  LSK+GLL G    K+ FCEHC+ GK
Sbjct: 248 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 307

Query: 302 KTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSD 123
             RVKF T+ H TEGILDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KHK  
Sbjct: 308 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQ 367

Query: 122 VLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
             +VF EWK  VE QT RK+K+LR+DNG EF S  F   C
Sbjct: 368 AFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYC 407


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score =  183 bits (465), Expect = 1e-50
 Identities = 88/160 (55%), Positives = 108/160 (67%), Gaps = 2/160 (1%)
 Frame = -1

Query: 476 VTGALAASVDR--DVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGK 303
           + G +AA  D   + D + LWHMRLGH SE  L  LSK+GLL G    K+ FCEHC+ GK
Sbjct: 248 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 307

Query: 302 KTRVKFGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSD 123
             RVKF T+ H TEGILDYVH+D+WGP++ TS GG  Y ++ VDDYSR+ W Y +KHK  
Sbjct: 308 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQ 367

Query: 122 VLEVFVEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
             +VF EWK  VE QT RK+K+LR+DNG EF S  F   C
Sbjct: 368 AFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYC 407


>gb|AOZ57162.1| integrase, partial [Coccinia grandis]
          Length = 226

 Score =  170 bits (431), Expect = 2e-50
 Identities = 77/141 (54%), Positives = 97/141 (68%)
 Frame = -1

Query: 425 LWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVKFGTAVHQTEGILDY 246
           LWHMRLGH SEK +Q LS++ LL G     ++FCEHCV GK  R KF    H+T G LDY
Sbjct: 1   LWHMRLGHMSEKGMQILSRRDLLCGHKVQDLEFCEHCVFGKLHRRKFSKGAHRTRGTLDY 60

Query: 245 VHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVFVEWKRNVELQTGRK 66
           +H+D WGPS+  S+GG  YF+S +DDYSR  WV+ +KHKSD  + F +WK  +E QTG+K
Sbjct: 61  IHSDCWGPSRVESVGGSRYFMSIIDDYSRMTWVFMMKHKSDAFKNFKQWKTLIENQTGKK 120

Query: 65  IKMLRSDNGGEFKSDPFLQLC 3
           IK LR+DNG EF    F + C
Sbjct: 121 IKRLRTDNGLEFCGSEFNEFC 141


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
 gb|ABF96427.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1326

 Score =  183 bits (464), Expect = 2e-50
 Identities = 85/155 (54%), Positives = 106/155 (68%)
 Frame = -1

Query: 467 ALAASVDRDVDTSRLWHMRLGHTSEKSLQNLSKQGLLKGAGTCKVDFCEHCVLGKKTRVK 288
           A A S D  + T+ LWHMRLGH SE  +  L K+ LL G    K+ FCEHCV GK  RVK
Sbjct: 415 AAAVSKDEPIKTN-LWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVK 473

Query: 287 FGTAVHQTEGILDYVHTDVWGPSKHTSLGGKNYFVSFVDDYSRRNWVYAIKHKSDVLEVF 108
           F T+VH+T+GILDYVHTD+WGPS+   LGG  Y ++ +DDYSR+ W Y +KHK D    F
Sbjct: 474 FNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAF 533

Query: 107 VEWKRNVELQTGRKIKMLRSDNGGEFKSDPFLQLC 3
            EWK  +E QT +++K+LR+DNGGEF SD F   C
Sbjct: 534 KEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYC 568