BLASTX nr result

ID: Ophiopogon24_contig00011920 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011920
         (461 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241658.1| cyclin-dependent kinase F-4-like isoform X1 ...   103   4e-23
gb|ONK58912.1| uncharacterized protein A4U43_C08F1000 [Asparagus...   103   5e-23
ref|XP_010940815.1| PREDICTED: cyclin-dependent kinase F-4 isofo...    58   6e-07
ref|XP_010940813.1| PREDICTED: cyclin-dependent kinase F-4 isofo...    58   6e-07
ref|XP_010940816.1| PREDICTED: cyclin-dependent kinase F-4 isofo...    56   3e-06
ref|XP_010940814.1| PREDICTED: cyclin-dependent kinase F-4 isofo...    56   3e-06

>ref|XP_020241658.1| cyclin-dependent kinase F-4-like isoform X1 [Asparagus officinalis]
 ref|XP_020241659.1| cyclin-dependent kinase F-4-like isoform X2 [Asparagus officinalis]
          Length = 469

 Score =  103 bits (258), Expect = 4e-23
 Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   PARNNPAPGFVGRNNARRTWDIPDDKLAHPTRGNYGNVSDVADKFTQMKVSYVPQSLSR- 179
           P RNNP  G++GRNN R+TWDIPD+KLAH     Y  VS++AD FTQ+KVS VPQ+LSR 
Sbjct: 385 PPRNNP--GYMGRNNTRKTWDIPDEKLAHSRGPYYNKVSNIADNFTQLKVSSVPQNLSRP 442

Query: 180 PPLAGGVHSRTDFLGQSNQNLFGRSYTRKVAG 275
           PPLAGG+       G+S  + F RSY RKVAG
Sbjct: 443 PPLAGGLQ-----FGRSYDSPFARSYPRKVAG 469


>gb|ONK58912.1| uncharacterized protein A4U43_C08F1000 [Asparagus officinalis]
          Length = 509

 Score =  103 bits (258), Expect = 5e-23
 Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   PARNNPAPGFVGRNNARRTWDIPDDKLAHPTRGNYGNVSDVADKFTQMKVSYVPQSLSR- 179
           P RNNP  G++GRNN R+TWDIPD+KLAH     Y  VS++AD FTQ+KVS VPQ+LSR 
Sbjct: 425 PPRNNP--GYMGRNNTRKTWDIPDEKLAHSRGPYYNKVSNIADNFTQLKVSSVPQNLSRP 482

Query: 180 PPLAGGVHSRTDFLGQSNQNLFGRSYTRKVAG 275
           PPLAGG+       G+S  + F RSY RKVAG
Sbjct: 483 PPLAGGLQ-----FGRSYDSPFARSYPRKVAG 509


>ref|XP_010940815.1| PREDICTED: cyclin-dependent kinase F-4 isoform X3 [Elaeis
           guineensis]
          Length = 465

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   PARNNPAPGFVGRNNARRTWDIPDDKLAHPTRGNYGNVSDVADKFTQMKVSYVPQSLSRP 182
           PARNNPA G++GR++ R   D+ D KLAH  + +   VSD + K   +K    PQ L +P
Sbjct: 378 PARNNPA-GYLGRDS-RSVSDVTD-KLAH-LKVSSNKVSDASQKLAHLKAG--PQPLRQP 431

Query: 183 PL--AGGVHSRTDFLGQSNQNLFGRS-YTRKVAG 275
           P   AGG HS TDFL   ++    RS Y RKVAG
Sbjct: 432 PRMKAGGWHSLTDFLANPDEAPAPRSYYPRKVAG 465


>ref|XP_010940813.1| PREDICTED: cyclin-dependent kinase F-4 isoform X1 [Elaeis
           guineensis]
          Length = 491

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   PARNNPAPGFVGRNNARRTWDIPDDKLAHPTRGNYGNVSDVADKFTQMKVSYVPQSLSRP 182
           PARNNPA G++GR++ R   D+ D KLAH  + +   VSD + K   +K    PQ L +P
Sbjct: 404 PARNNPA-GYLGRDS-RSVSDVTD-KLAH-LKVSSNKVSDASQKLAHLKAG--PQPLRQP 457

Query: 183 PL--AGGVHSRTDFLGQSNQNLFGRS-YTRKVAG 275
           P   AGG HS TDFL   ++    RS Y RKVAG
Sbjct: 458 PRMKAGGWHSLTDFLANPDEAPAPRSYYPRKVAG 491


>ref|XP_010940816.1| PREDICTED: cyclin-dependent kinase F-4 isoform X4 [Elaeis
           guineensis]
          Length = 464

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   PARNNPAPGFVGRNNARRTWDIPDDKLAHPTRGNYGNVSDVADKFTQMKVSYVPQSLSRP 182
           PARNNP  G++GR++ R   D+ D KLAH  + +   VSD + K   +K    PQ L +P
Sbjct: 378 PARNNP--GYLGRDS-RSVSDVTD-KLAH-LKVSSNKVSDASQKLAHLKAG--PQPLRQP 430

Query: 183 PL--AGGVHSRTDFLGQSNQNLFGRS-YTRKVAG 275
           P   AGG HS TDFL   ++    RS Y RKVAG
Sbjct: 431 PRMKAGGWHSLTDFLANPDEAPAPRSYYPRKVAG 464


>ref|XP_010940814.1| PREDICTED: cyclin-dependent kinase F-4 isoform X2 [Elaeis
           guineensis]
          Length = 490

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   PARNNPAPGFVGRNNARRTWDIPDDKLAHPTRGNYGNVSDVADKFTQMKVSYVPQSLSRP 182
           PARNNP  G++GR++ R   D+ D KLAH  + +   VSD + K   +K    PQ L +P
Sbjct: 404 PARNNP--GYLGRDS-RSVSDVTD-KLAH-LKVSSNKVSDASQKLAHLKAG--PQPLRQP 456

Query: 183 PL--AGGVHSRTDFLGQSNQNLFGRS-YTRKVAG 275
           P   AGG HS TDFL   ++    RS Y RKVAG
Sbjct: 457 PRMKAGGWHSLTDFLANPDEAPAPRSYYPRKVAG 490


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