BLASTX nr result

ID: Ophiopogon24_contig00011776 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011776
         (582 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT68794.1| gag protein [Simian immunodeficiency virus]             59   7e-07
ref|XP_014293344.1| PREDICTED: DNA-binding protein HEXBP-like [H...    57   2e-06
ref|XP_014274435.1| PREDICTED: serine/arginine-rich splicing fac...    56   2e-06
gb|AAT68802.1| gag protein [Simian immunodeficiency virus]             58   2e-06
ref|XP_014292168.1| PREDICTED: DNA-binding protein HEXBP-like [H...    55   2e-06
ref|XP_014292729.1| PREDICTED: serine/arginine-rich splicing fac...    55   4e-06
gb|ALS54600.1| gag protein [Simian immunodeficiency virus]             57   4e-06
gb|ADF42563.1| gag protein [Simian immunodeficiency virus]             57   4e-06
ref|XP_014289522.1| PREDICTED: cellular nucleic acid-binding pro...    54   7e-06
ref|XP_006584333.1| PREDICTED: uncharacterized protein LOC102669...    54   9e-06

>gb|AAT68794.1| gag protein [Simian immunodeficiency virus]
          Length = 535

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
 Frame = -1

Query: 387 EVVCFNCGEVGHLIASCK---KLVCFCCRREGHLAPGCPYNPKSATSRLGSSDWKSTVPQ 217
           ++ CFNCG++GHL   CK   K  CF C +EGH+A  C   P++  + LG++ W S  P+
Sbjct: 420 QIRCFNCGQIGHLQKDCKRPRKTKCFKCGQEGHIAKNCGQTPRA--NFLGNTPWASRRPR 477

Query: 216 QPLKSQHSKVSDNHVWK-------QVGHQRKRPMRKEAARNSAY 106
             L+     + ++   +        V  Q   P R+E  R   Y
Sbjct: 478 NFLEGIGKYIPESTADQVYSTTRVPVQGQENNPQREETTRRGKY 521


>ref|XP_014293344.1| PREDICTED: DNA-binding protein HEXBP-like [Halyomorpha halys]
          Length = 207

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
 Frame = -1

Query: 390 EEVVCFNCGEVGHLIASCKKLVCFCCRREGHLAPGCPYNPKSATSRLGSSDWKSTVPQQP 211
           E+  C  CG+VGHL+A C +  CF C  EGH+A  CPY  K A           T P +P
Sbjct: 94  EDKKCHGCGKVGHLVAQCPRTRCFECGNEGHIARQCPYMYKRA----------ETGPGEP 143

Query: 210 LKSQHSKVSDNHVWKQVGHQRKRPMRKEAARNSAYDKGKAAANKG-NRDWESKSPVVLRC 34
           ++           ++++  +R+   R   + +  ++  +A+  +G  R      P   RC
Sbjct: 144 MEIN---------FQRIRRKRREDYRPSESSSETFEASEASGTEGEGRRRRCNKPPSSRC 194


>ref|XP_014274435.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like
           [Halyomorpha halys]
          Length = 163

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 5/176 (2%)
 Frame = -1

Query: 540 MVGCGYRQRA*AYGLRV-----DPRPGGVVSSAIKIG*EERTHIDCGAGPRQFIPEEVVC 376
           M+  G   R  A G+R      +PR  G      + G   +  +  G G      E+  C
Sbjct: 3   MIEDGTEYRTTAQGIRQHHGREEPRDSGKDRGTGREGRPNQGRVRNGGGK-----EDRKC 57

Query: 375 FNCGEVGHLIASCKKLVCFCCRREGHLAPGCPYNPKSATSRLGSSDWKSTVPQQPLKSQH 196
             CG+VGHL+A C +  CF C  EG +A  CPY  + A           T P +P++   
Sbjct: 58  HGCGKVGHLVAQCPRTRCFECGNEGQIARQCPYMYRRA----------ETEPGEPME--- 104

Query: 195 SKVSDNHVWKQVGHQRKRPMRKEAARNSAYDKGKAAANKGNRDWESKSPVVLRCTS 28
                  + +++  +R++  R+  + +   +  +A+  +G R    +   V R ++
Sbjct: 105 -------ILQRIRRRRRKEYRRSESSSETSEATEASGTEGRRKRREEEISVSRASN 153


>gb|AAT68802.1| gag protein [Simian immunodeficiency virus]
          Length = 532

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -1

Query: 417 GAGPRQFIPEEVVCFNCGEVGHLIASCK---KLVCFCCRREGHLAPGCPYNPKSATSRLG 247
           G GPR+    ++ CFNCG++GH+   CK   K+ CF C +EGH+A  C   P++  + LG
Sbjct: 411 GGGPRR----QLRCFNCGQIGHVQRDCKKPRKVKCFKCGKEGHIAKNCGQVPRA--NFLG 464

Query: 246 SSDWKSTVPQQPLK 205
           ++ W S  P+  L+
Sbjct: 465 NAPWASRRPRNFLE 478


>ref|XP_014292168.1| PREDICTED: DNA-binding protein HEXBP-like [Halyomorpha halys]
          Length = 145

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 24/53 (45%), Positives = 33/53 (62%)
 Frame = -1

Query: 390 EEVVCFNCGEVGHLIASCKKLVCFCCRREGHLAPGCPYNPKSATSRLGSSDWK 232
           E+  C+ CG+VGHL+A C +  CF C  EGH+A  CPY  +SA +    + WK
Sbjct: 94  EDRKCYECGKVGHLVAPCPRTRCFECDNEGHIARQCPYMYRSAETG-PENQWK 145


>ref|XP_014292729.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like
           [Halyomorpha halys]
          Length = 180

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/94 (31%), Positives = 42/94 (44%)
 Frame = -1

Query: 390 EEVVCFNCGEVGHLIASCKKLVCFCCRREGHLAPGCPYNPKSATSRLGSSDWKSTVPQQP 211
           E+  C  CG++GHL+A C +  CF C  EGH A  CPY  K     LG          +P
Sbjct: 66  EDRKCHGCGKIGHLLAQCPRTRCFECGNEGHNAKQCPYVYKRREVNLG----------EP 115

Query: 210 LKSQHSKVSDNHVWKQVGHQRKRPMRKEAARNSA 109
           ++    +V    V +  G   + P   EA+   A
Sbjct: 116 MEVNAQRVRRRRVIRSGGSSTESPGTSEASETEA 149


>gb|ALS54600.1| gag protein [Simian immunodeficiency virus]
          Length = 523

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
 Frame = -1

Query: 417 GAGPRQFIPEEVVCFNCGEVGHLIASC---KKLVCFCCRREGHLAPGCPYNPKSATSRLG 247
           G GPR+  P  + CFNCG+ GH+  +C   +KL C  C + GH+A  C    +   + LG
Sbjct: 391 GGGPRRGPPRPIRCFNCGKFGHIQKNCTEPRKLRCLKCGKPGHMAKDC----RGQVNFLG 446

Query: 246 SSDWKSTVPQQPLKSQHSKVSDNHVWKQVGHQRKRPMRKEAARNSAYDKGKAA----ANK 79
              W  + P+  L + H              + + P        +AYD  K      A++
Sbjct: 447 YGRWAGSKPRNFLAATHG-------------EEENPPTAPPPPATAYDPAKKLLQQYADR 493

Query: 78  GNRDWESKSP 49
           G +  E K P
Sbjct: 494 GRQMREEKRP 503


>gb|ADF42563.1| gag protein [Simian immunodeficiency virus]
          Length = 544

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
 Frame = -1

Query: 411 GPRQFIPEEVVCFNCGEVGHLIASCKK---LVCFCCRREGHLAPGCP-YNPKSATSRLGS 244
           GPR      + C+NCG++GH+   C+K   + CF C++ GH+A  CP   P+S  + LG 
Sbjct: 419 GPRP--GNRIRCYNCGQIGHVQKDCRKPRTVRCFKCQQTGHMAKNCPKAAPQSKNNFLGK 476

Query: 243 SDWKSTVPQQPLKSQHS--------KVSDNHVWKQVGHQRKRPMRKEAARNSAY 106
             W    P+  ++ QH             + ++       ++P ++E  R   Y
Sbjct: 477 LPWGRRAPRNFIEQQHQTWGIGKYIPEGGDEIFSSSRVPEQKPQQQEETRRGKY 530


>ref|XP_014289522.1| PREDICTED: cellular nucleic acid-binding protein-like [Halyomorpha
           halys]
          Length = 153

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 26/88 (29%), Positives = 42/88 (47%)
 Frame = -1

Query: 378 CFNCGEVGHLIASCKKLVCFCCRREGHLAPGCPYNPKSATSRLGSSDWKSTVPQQPLKSQ 199
           C  CG++GH++A C +  CF C  EGH+A  C Y  K   + +G          +P++  
Sbjct: 43  CHGCGKIGHVVAQCPRTRCFECSNEGHIAKQCSYIYKRREANVG----------EPMEVN 92

Query: 198 HSKVSDNHVWKQVGHQRKRPMRKEAARN 115
             +V  N V +  G   + P   EA+ +
Sbjct: 93  AQRVRKNRVLRTGGSTTESPGTSEASES 120


>ref|XP_006584333.1| PREDICTED: uncharacterized protein LOC102669853 [Glycine max]
          Length = 171

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = -1

Query: 423 DCGAGPRQFIPEEVVCFNCGEVGHLIASC--KKLVCFCCRREGHLAPGCPYNPK 268
           D G+ P  F P ++ C+ CG+ GH+ ++C  K + CF CR+ GH+   CPY  K
Sbjct: 118 DSGSKPNTF-PTQITCYRCGKPGHISSNCPDKGITCFNCRQRGHIQKDCPYPKK 170


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