BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011774
         (517 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265573.1| DNA-directed RNA polymerases II, IV and V su...   295   6e-98
gb|ONK70315.1| uncharacterized protein A4U43_C05F32460 [Asparagu...   295   3e-97
ref|XP_020673703.1| DNA-directed RNA polymerases II, IV and V su...   285   3e-94
ref|XP_020593275.1| DNA-directed RNA polymerases II, IV and V su...   283   1e-93
ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, ...   281   2e-92
ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, ...   279   7e-92
ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, ...   279   9e-92
gb|PKA55547.1| DNA-directed RNA polymerase II subunit RPB3-A [Ap...   277   5e-91
ref|XP_020109766.1| DNA-directed RNA polymerases II, IV and V su...   277   6e-91
ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, ...   275   2e-90
gb|OAY65904.1| DNA-directed RNA polymerases II, IV and V subunit...   277   3e-90
gb|PIA27129.1| hypothetical protein AQUCO_08300072v1 [Aquilegia ...   272   5e-89
gb|OVA02066.1| DNA-directed RNA polymerase [Macleaya cordata]         274   2e-88
ref|XP_024165380.1| DNA-directed RNA polymerases II, IV and V su...   267   3e-87
gb|PPD90658.1| hypothetical protein GOBAR_DD12397 [Gossypium bar...   267   3e-87
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   267   3e-87
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, ...   267   3e-87
dbj|GAV81673.1| RNA_pol_A_bac domain-containing protein/RNA_pol_...   267   4e-87
ref|XP_006853170.1| DNA-directed RNA polymerases II, IV and V su...   267   5e-87
ref|XP_009350515.1| PREDICTED: DNA-directed RNA polymerases II, ...   266   6e-87

>ref|XP_020265573.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Asparagus
           officinalis]
          Length = 322

 Score =  295 bits (754), Expect = 6e-98
 Identities = 149/171 (87%), Positives = 152/171 (88%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPTV IDLVEI+ NSSVLNDEFIAHRLGLIPLTSD+AMRMRFSRDCDSC
Sbjct: 35  ANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSDNAMRMRFSRDCDSC 94

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEFHLNV CDSDQTLDVTS DLRS E  VIPVD+          STSYE 
Sbjct: 95  DGDGQCEFCSVEFHLNVCCDSDQTLDVTSADLRSAEASVIPVDLAVKALAMESSSTSYEA 154

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           AE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN
Sbjct: 155 AEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 205


>gb|ONK70315.1| uncharacterized protein A4U43_C05F32460 [Asparagus officinalis]
          Length = 373

 Score =  295 bits (754), Expect = 3e-97
 Identities = 149/171 (87%), Positives = 152/171 (88%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPTV IDLVEI+ NSSVLNDEFIAHRLGLIPLTSD+AMRMRFSRDCDSC
Sbjct: 86  ANALRRVMIAEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSDNAMRMRFSRDCDSC 145

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEFHLNV CDSDQTLDVTS DLRS E  VIPVD+          STSYE 
Sbjct: 146 DGDGQCEFCSVEFHLNVCCDSDQTLDVTSADLRSAEASVIPVDLAVKALAMESSSTSYEA 205

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           AE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN
Sbjct: 206 AEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 256


>ref|XP_020673703.1| DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Dendrobium catenatum]
          Length = 322

 Score =  285 bits (729), Expect = 3e-94
 Identities = 143/171 (83%), Positives = 152/171 (88%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPL SDDAM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEANSSVLNDEFIAHRLGLIPLVSDDAMGMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHLNVRCDSDQTLDVTS DLRSTEPRVIPVDV         +S  ++ 
Sbjct: 94  DGDGQCEYCSVEFHLNVRCDSDQTLDVTSNDLRSTEPRVIPVDV--ATRSLASESGGFDS 151

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
            + RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHIN
Sbjct: 152 PDQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHIN 202


>ref|XP_020593275.1| DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Phalaenopsis equestris]
          Length = 323

 Score =  283 bits (725), Expect = 1e-93
 Identities = 141/171 (82%), Positives = 152/171 (88%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPL SDDAM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEANSSVLNDEFIAHRLGLIPLVSDDAMGMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHLNVRCDSDQTLDVTS DLRSTEPRV+PVDV         ++  ++ 
Sbjct: 94  DGDGQCEYCSVEFHLNVRCDSDQTLDVTSNDLRSTEPRVVPVDV--AARTLASETGDFDS 151

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
            + RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHIN
Sbjct: 152 QDQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHIN 202


>ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Musa acuminata subsp. malaccensis]
          Length = 330

 Score =  281 bits (718), Expect = 2e-92
 Identities = 142/171 (83%), Positives = 149/171 (87%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVM+AEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTSDDAM MRFSRDCD+C
Sbjct: 44  ANALRRVMLAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSDDAMSMRFSRDCDAC 103

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEF L+VRCDSDQTLDVTS DL+ST PRV PVDV         D   YE 
Sbjct: 104 DGDGQCEFCSVEFFLSVRCDSDQTLDVTSADLQSTNPRVCPVDVAANALSSAAD--GYES 161

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           AE +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP IHIN
Sbjct: 162 AEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPQIHIN 212


>ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Elaeis guineensis]
          Length = 323

 Score =  279 bits (714), Expect = 7e-92
 Identities = 139/171 (81%), Positives = 150/171 (87%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVM+AEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTSDDAM MRFSRDCDSC
Sbjct: 35  ANALRRVMLAEVPTLAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSDDAMGMRFSRDCDSC 94

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQC++CSVEFHLNVRCDSDQTLDVTS DLRST P V PVDV         D  S++ 
Sbjct: 95  DGDGQCDYCSVEFHLNVRCDSDQTLDVTSADLRSTSPTVCPVDV-AHRVLASADPNSFDS 153

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           ++ RGI+IVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTF+YEP IHIN
Sbjct: 154 SDQRGILIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFLYEPQIHIN 204


>ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Nelumbo nucifera]
          Length = 321

 Score =  279 bits (713), Expect = 9e-92
 Identities = 139/171 (81%), Positives = 153/171 (89%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTS+ AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEGNSSVLNDEFIAHRLGLIPLTSERAMGMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHL+VRCD+DQTLDVTS DLRS++P V+PVDV         +ST Y+ 
Sbjct: 94  DGDGQCEYCSVEFHLHVRCDTDQTLDVTSYDLRSSDPSVVPVDV-----AQHSESTGYDA 148

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHIN
Sbjct: 149 SEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHIN 199


>gb|PKA55547.1| DNA-directed RNA polymerase II subunit RPB3-A [Apostasia
           shenzhenica]
          Length = 320

 Score =  277 bits (708), Expect = 5e-91
 Identities = 139/171 (81%), Positives = 149/171 (87%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMI+EVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPL S+DAM MRFSRDCD+C
Sbjct: 34  ANALRRVMISEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLISEDAMGMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHLNV CDSDQTLDVTS DLRSTEPRV PVDV         +   Y+ 
Sbjct: 94  DGDGQCEYCSVEFHLNVLCDSDQTLDVTSSDLRSTEPRVCPVDV--AARAFASEIGGYDS 151

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
            + +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN
Sbjct: 152 PDHKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 202


>ref|XP_020109766.1| DNA-directed RNA polymerases II, IV and V subunit 3-like, partial
           [Ananas comosus]
          Length = 327

 Score =  277 bits (708), Expect = 6e-91
 Identities = 140/173 (80%), Positives = 151/173 (87%), Gaps = 2/173 (1%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVM+AEVPTV IDLVE++ NSSVLNDEFIAHRLGL+PLTSD AM MRFSRDCD+C
Sbjct: 40  ANALRRVMLAEVPTVAIDLVEVEVNSSVLNDEFIAHRLGLVPLTSDAAMAMRFSRDCDAC 99

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYE- 359
           DGDGQCE+CSVEFHL VRCD+DQTLDVTS DLRST+P+V PVDV         D TSY+ 
Sbjct: 100 DGDGQCEYCSVEFHLAVRCDADQTLDVTSADLRSTDPKVCPVDV---ARALDADPTSYDS 156

Query: 360 -VAE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
             A+ RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP IHIN
Sbjct: 157 TAADQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHIN 209


>ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Nelumbo nucifera]
          Length = 321

 Score =  275 bits (704), Expect = 2e-90
 Identities = 136/171 (79%), Positives = 150/171 (87%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVM+AEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTSD AM MRFSRDCD+C
Sbjct: 34  ANALRRVMLAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSDRAMGMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHL VRCDSDQTLDVTS DL+S++P V+PVDV         +S  Y+ 
Sbjct: 94  DGDGQCEYCSVEFHLKVRCDSDQTLDVTSHDLKSSDPSVVPVDV-----AQYAESGGYDA 148

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGI+IVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+ HIN
Sbjct: 149 SEQRGILIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEFHIN 199


>gb|OAY65904.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Ananas
           comosus]
          Length = 378

 Score =  277 bits (708), Expect = 3e-90
 Identities = 140/173 (80%), Positives = 151/173 (87%), Gaps = 2/173 (1%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVM+AEVPTV IDLVE++ NSSVLNDEFIAHRLGL+PLTSD AM MRFSRDCD+C
Sbjct: 91  ANALRRVMLAEVPTVAIDLVEVEVNSSVLNDEFIAHRLGLVPLTSDAAMAMRFSRDCDAC 150

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYE- 359
           DGDGQCE+CSVEFHL VRCD+DQTLDVTS DLRST+P+V PVDV         D TSY+ 
Sbjct: 151 DGDGQCEYCSVEFHLAVRCDADQTLDVTSADLRSTDPKVCPVDV---ARALDADPTSYDS 207

Query: 360 -VAE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
             A+ RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP IHIN
Sbjct: 208 TAADQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHIN 260


>gb|PIA27129.1| hypothetical protein AQUCO_08300072v1 [Aquilegia coerulea]
          Length = 324

 Score =  272 bits (695), Expect = 5e-89
 Identities = 137/171 (80%), Positives = 149/171 (87%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFI+HRLGLIPLTSD AM MRFSRDCD+C
Sbjct: 37  ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFISHRLGLIPLTSDRAMGMRFSRDCDAC 96

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE CSVEFHL+VRCD DQTLDVTS DL ST+P VIPVDV          S++Y+ 
Sbjct: 97  DGDGQCEHCSVEFHLDVRCDQDQTLDVTSADLISTDPSVIPVDV-----AAKSSSSAYDA 151

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+I IN
Sbjct: 152 SENKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIRIN 202


>gb|OVA02066.1| DNA-directed RNA polymerase [Macleaya cordata]
          Length = 419

 Score =  274 bits (700), Expect = 2e-88
 Identities = 136/171 (79%), Positives = 149/171 (87%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NS+VLNDEFIAHRLGLIPLTS+ AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEVNSTVLNDEFIAHRLGLIPLTSERAMGMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHL+VRCD DQTLDVTS DL S++P V+PVDV          S+ Y+ 
Sbjct: 94  DGDGQCEYCSVEFHLSVRCDQDQTLDVTSADLLSSDPSVVPVDV-----AARSTSSGYDA 148

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP ATVTFMYEPDIHIN
Sbjct: 149 SENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPTATVTFMYEPDIHIN 199


>ref|XP_024165380.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Rosa
           chinensis]
 gb|PRQ22935.1| putative DNA-directed RNA polymerase [Rosa chinensis]
          Length = 318

 Score =  267 bits (683), Expect = 3e-87
 Identities = 136/171 (79%), Positives = 146/171 (85%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPTV IDLVEI+ NSSVLNDEFIAHRLGLIPLTSD AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTVAIDLVEIEINSSVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHL  RC SDQTLDVTS +L S++  V+PVD          D++ YE 
Sbjct: 94  DGDGQCEYCSVEFHLRARCHSDQTLDVTSKELLSSDHTVVPVD--------FSDASGYEA 145

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDI IN
Sbjct: 146 SEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIRIN 196


>gb|PPD90658.1| hypothetical protein GOBAR_DD12397 [Gossypium barbadense]
          Length = 318

 Score =  267 bits (683), Expect = 3e-87
 Identities = 136/171 (79%), Positives = 145/171 (84%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTS  AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEFHL  +C SDQTLDVTS DL S++  V+PVD          DS  YE 
Sbjct: 94  DGDGQCEFCSVEFHLRAKCISDQTLDVTSKDLYSSDHTVVPVD--------FTDSAGYES 145

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHIN
Sbjct: 146 SEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHIN 196


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Gossypium raimondii]
 gb|KJB77656.1| hypothetical protein B456_012G149200 [Gossypium raimondii]
          Length = 318

 Score =  267 bits (683), Expect = 3e-87
 Identities = 136/171 (79%), Positives = 145/171 (84%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTS  AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEFHL  +C SDQTLDVTS DL S++  V+PVD          DS  YE 
Sbjct: 94  DGDGQCEFCSVEFHLRAKCISDQTLDVTSKDLYSSDHTVVPVD--------FTDSAGYES 145

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHIN
Sbjct: 146 SEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHIN 196


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  267 bits (683), Expect = 3e-87
 Identities = 136/171 (79%), Positives = 146/171 (85%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPTV IDLVEI+ NSSVLNDEFIAHRLGLIPLTSD AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTVAIDLVEIEINSSVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEFHL  RC SDQTLDVTS +L S++  V+PVD          D++ YE 
Sbjct: 94  DGDGQCEYCSVEFHLRARCHSDQTLDVTSKELLSSDHTVVPVD--------FSDASGYEA 145

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDI IN
Sbjct: 146 SEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIRIN 196


>dbj|GAV81673.1| RNA_pol_A_bac domain-containing protein/RNA_pol_L domain-containing
           protein [Cephalotus follicularis]
          Length = 318

 Score =  267 bits (682), Expect = 4e-87
 Identities = 135/171 (78%), Positives = 146/171 (85%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPT+ IDLVEI+ NSSVLNDEFIAHRLGLIPLTS+ AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEFHL  +C +DQTLDVTS DL S++  V+PVD          DS  Y+V
Sbjct: 94  DGDGQCEFCSVEFHLRAKCLTDQTLDVTSKDLYSSDHTVVPVD--------FSDSAGYDV 145

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
            E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHIN
Sbjct: 146 PEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHIN 196


>ref|XP_006853170.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Amborella
           trichopoda]
 gb|ERN14637.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score =  267 bits (682), Expect = 5e-87
 Identities = 132/171 (77%), Positives = 148/171 (86%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRR+M+AEVPT+ IDLVEI+ NSSVLNDEF+AHRLGLIPLTS+ AM MRFSRDCD+C
Sbjct: 34  ANALRRIMLAEVPTIAIDLVEIEANSSVLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCE+CSVEF L+V+CDSDQTLDVTS DL S++  VIPVDV         DS  ++ 
Sbjct: 94  DGDGQCEYCSVEFQLSVKCDSDQTLDVTSADLVSSDIHVIPVDV----AGRGMDSNGFDA 149

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP ATVTFMYEP+IHIN
Sbjct: 150 SEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPGATVTFMYEPEIHIN 200


>ref|XP_009350515.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Pyrus x bretschneideri]
          Length = 318

 Score =  266 bits (681), Expect = 6e-87
 Identities = 136/171 (79%), Positives = 146/171 (85%)
 Frame = +3

Query: 3   ANALRRVMIAEVPTVVIDLVEIDTNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSC 182
           ANALRRVMIAEVPTV IDLVEI+ NSSVLNDEFIAHRLGLIPLTSD AM MRFSRDCD+C
Sbjct: 34  ANALRRVMIAEVPTVAIDLVEIEINSSVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDAC 93

Query: 183 DGDGQCEFCSVEFHLNVRCDSDQTLDVTSGDLRSTEPRVIPVDVXXXXXXXXXDSTSYEV 362
           DGDGQCEFCSVEFHL  +C SDQTLDVTS DL S++  V+PVD          DS+ +E 
Sbjct: 94  DGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLLSSDHTVVPVD--------FSDSSGFES 145

Query: 363 AE*RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHIN 515
           +E +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDI IN
Sbjct: 146 SEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIRIN 196