BLASTX nr result

ID: Ophiopogon24_contig00011727 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011727
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274612.1| beta-carotene isomerase D27, chloroplastic [...    56   7e-07

>ref|XP_020274612.1| beta-carotene isomerase D27, chloroplastic [Asparagus officinalis]
 gb|ONK63212.1| uncharacterized protein A4U43_C07F12550 [Asparagus officinalis]
          Length = 265

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +3

Query: 252 DEMKAEYKPGPLDDVLLGFFRQKMVEL*EVGWD 350
           DE K EYKPGPLDD+LL FFRQKMVE  EVGWD
Sbjct: 46  DESKPEYKPGPLDDLLLRFFRQKMVE--EVGWD 76


Top