BLASTX nr result

ID: Ophiopogon24_contig00011627 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011627
         (878 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK82067.1| uncharacterized protein A4U43_C01F35780 [Asparagu...    63   2e-07
ref|XP_020246535.1| LOW QUALITY PROTEIN: E3 ubiquitin-protein li...    63   3e-07

>gb|ONK82067.1| uncharacterized protein A4U43_C01F35780 [Asparagus officinalis]
          Length = 1298

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 82/236 (34%), Positives = 109/236 (46%), Gaps = 32/236 (13%)
 Frame = -1

Query: 827  SVQ*PDLIGSIVYLLRAKAYGTCGSAYTASQRVCG------YGNVFL*PSTFLPWFSTSC 666
            SVQ  +LIG +V ++R +A G+ GS  T  QRV G      YG      S  LP   +  
Sbjct: 432  SVQRANLIGHLVDMIRPEADGSGGSVVTTPQRVYGCQWNIVYGRAR--SSDGLPPLVSRR 489

Query: 665  HVVFLEFDISETNHPPVANIYFNLDPSLASETSTNIHVLSRKESKREYVMAQS--YEVLL 492
             +  L +    TNH  VA+I F  D SLAS  ST  HV S+KE  +E + A+    E   
Sbjct: 490  VLEILTY--LATNHSSVASILFCFDLSLASAPSTTNHVDSKKERGKEKLCAKDLLVESFS 547

Query: 491  KL*YASGIIPDPRDQILFLRS------R*WXXXXXVDNAVGKIDSLLQSE*AKGNSEVLG 330
            K      +      + LFLRS              V+NAV +IDSL  SE AKG SE+  
Sbjct: 548  KFDIPLILFLRLLSRPLFLRSCAHLEQVMGLLQVVVNNAVARIDSLPPSEPAKGVSEMHE 607

Query: 329  VNEALSSS------LEQEPN------PPSLVATSQ------LHCILLQLPKSVLQS 216
              E  S S      L +E N      P + V++S+       + I LQLPK  L++
Sbjct: 608  AAEFPSDSQKDSSILNKESNQEMDQIPSAEVSSSKGNTSVTTYDIFLQLPKPELRN 663


>ref|XP_020246535.1| LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like [Asparagus
            officinalis]
          Length = 3732

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 82/236 (34%), Positives = 109/236 (46%), Gaps = 32/236 (13%)
 Frame = -1

Query: 827  SVQ*PDLIGSIVYLLRAKAYGTCGSAYTASQRVCG------YGNVFL*PSTFLPWFSTSC 666
            SVQ  +LIG +V ++R +A G+ GS  T  QRV G      YG      S  LP   +  
Sbjct: 2856 SVQRANLIGHLVDMIRPEADGSGGSVVTTPQRVYGCQWNIVYGRAR--SSDGLPPLVSRR 2913

Query: 665  HVVFLEFDISETNHPPVANIYFNLDPSLASETSTNIHVLSRKESKREYVMAQS--YEVLL 492
             +  L +    TNH  VA+I F  D SLAS  ST  HV S+KE  +E + A+    E   
Sbjct: 2914 VLEILTY--LATNHSSVASILFCFDLSLASAPSTTNHVDSKKERGKEKLCAKDLLVESFS 2971

Query: 491  KL*YASGIIPDPRDQILFLRS------R*WXXXXXVDNAVGKIDSLLQSE*AKGNSEVLG 330
            K      +      + LFLRS              V+NAV +IDSL  SE AKG SE+  
Sbjct: 2972 KFDIPLILFLRLLSRPLFLRSCAHLEQVMGLLQVVVNNAVARIDSLPPSEPAKGVSEMHE 3031

Query: 329  VNEALSSS------LEQEPN------PPSLVATSQ------LHCILLQLPKSVLQS 216
              E  S S      L +E N      P + V++S+       + I LQLPK  L++
Sbjct: 3032 AAEFPSDSQKDSSILNKESNQEMDQIPSAEVSSSKGNTSVTTYDIFLQLPKPELRN 3087


Top