BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011516
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243920.1| mediator of RNA polymerase II transcription ...   103   1e-24
ref|XP_020243919.1| mediator of RNA polymerase II transcription ...   103   1e-24
gb|PKU86758.1| Mediator of RNA polymerase II transcription subun...    92   1e-20
ref|XP_020583504.1| mediator of RNA polymerase II transcription ...    92   2e-20
ref|XP_010931677.1| PREDICTED: mediator of RNA polymerase II tra...    93   2e-20
ref|XP_008810215.1| PREDICTED: mediator of RNA polymerase II tra...    93   2e-20
ref|XP_020689144.1| mediator of RNA polymerase II transcription ...    92   8e-20
ref|XP_020583500.1| mediator of RNA polymerase II transcription ...    92   8e-20
ref|XP_020113534.1| mediator of RNA polymerase II transcription ...    89   1e-18
gb|OAY81348.1| Mediator of RNA polymerase II transcription subun...    89   1e-18
ref|XP_009412106.1| PREDICTED: mediator of RNA polymerase II tra...    89   2e-18
gb|OVA08259.1| hypothetical protein BVC80_1101g69 [Macleaya cord...    91   2e-18
gb|OVA12531.1| hypothetical protein BVC80_9011g43 [Macleaya cord...    87   5e-18
emb|CBI36875.3| unnamed protein product, partial [Vitis vinifera]      83   6e-17
ref|XP_024026340.1| mediator of RNA polymerase II transcription ...    84   9e-17
ref|XP_002268380.1| PREDICTED: mediator of RNA polymerase II tra...    83   1e-16
ref|XP_002440628.1| mediator of RNA polymerase II transcription ...    83   1e-16
ref|XP_015640776.1| PREDICTED: mediator of RNA polymerase II tra...    83   1e-16
gb|KVI01417.1| hypothetical protein Ccrd_020306 [Cynara carduncu...    81   1e-16
gb|PON65883.1| Mediator of RNA polymerase II transcription subun...    83   2e-16

>ref|XP_020243920.1| mediator of RNA polymerase II transcription subunit 28 isoform X2
           [Asparagus officinalis]
          Length = 136

 Score =  103 bits (258), Expect = 1e-24
 Identities = 55/70 (78%), Positives = 57/70 (81%)
 Frame = -1

Query: 222 SHRLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGW 43
           S +LQLYF           LQHEDQPTKEEM+RKEISVMEEELKTKSELIDKHE LILGW
Sbjct: 68  SKKLQLYFIG---------LQHEDQPTKEEMVRKEISVMEEELKTKSELIDKHEKLILGW 118

Query: 42  RKELKDQLDK 13
           RKELKDQLDK
Sbjct: 119 RKELKDQLDK 128


>ref|XP_020243919.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
           [Asparagus officinalis]
 gb|ONK61615.1| uncharacterized protein A4U43_C08F31800 [Asparagus officinalis]
          Length = 139

 Score =  103 bits (258), Expect = 1e-24
 Identities = 55/70 (78%), Positives = 57/70 (81%)
 Frame = -1

Query: 222 SHRLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGW 43
           S +LQLYF           LQHEDQPTKEEM+RKEISVMEEELKTKSELIDKHE LILGW
Sbjct: 71  SKKLQLYFIG---------LQHEDQPTKEEMVRKEISVMEEELKTKSELIDKHEKLILGW 121

Query: 42  RKELKDQLDK 13
           RKELKDQLDK
Sbjct: 122 RKELKDQLDK 131


>gb|PKU86758.1| Mediator of RNA polymerase II transcription subunit 28 [Dendrobium
           catenatum]
          Length = 72

 Score = 91.7 bits (226), Expect = 1e-20
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF +         LQHEDQPTKEEMLRKEIS+ME+ELKTKSELI KHEN I  WR+
Sbjct: 6   KLQLYFIS---------LQHEDQPTKEEMLRKEISIMEDELKTKSELIKKHENRIEAWRE 56

Query: 36  ELKDQLDK 13
           ELK+QLD+
Sbjct: 57  ELKEQLDR 64


>ref|XP_020583504.1| mediator of RNA polymerase II transcription subunit 28 isoform X2
           [Phalaenopsis equestris]
          Length = 87

 Score = 91.7 bits (226), Expect = 2e-20
 Identities = 48/68 (70%), Positives = 54/68 (79%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF +         LQHEDQPTKEEMLRKEISVMEEELKTKSELI K E LI+ WRK
Sbjct: 21  KLQLYFIS---------LQHEDQPTKEEMLRKEISVMEEELKTKSELIKKQEGLIVAWRK 71

Query: 36  ELKDQLDK 13
           ELK+QL++
Sbjct: 72  ELKEQLER 79


>ref|XP_010931677.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
           [Elaeis guineensis]
          Length = 145

 Score = 93.2 bits (230), Expect = 2e-20
 Identities = 50/68 (73%), Positives = 52/68 (76%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           RLQLYF           LQ EDQPTKEEMLRKEIS+MEEELK KSELI KHE LI GWRK
Sbjct: 79  RLQLYFIG---------LQREDQPTKEEMLRKEISIMEEELKAKSELIKKHEKLIQGWRK 129

Query: 36  ELKDQLDK 13
           ELKDQL+K
Sbjct: 130 ELKDQLEK 137


>ref|XP_008810215.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
           [Phoenix dactylifera]
          Length = 145

 Score = 93.2 bits (230), Expect = 2e-20
 Identities = 50/68 (73%), Positives = 52/68 (76%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           RLQLYF           LQ EDQPTKEEMLRKEIS+MEEELK KSELI KHE LI GWRK
Sbjct: 79  RLQLYFIG---------LQREDQPTKEEMLRKEISIMEEELKAKSELIKKHEKLIQGWRK 129

Query: 36  ELKDQLDK 13
           ELKDQL+K
Sbjct: 130 ELKDQLEK 137


>ref|XP_020689144.1| mediator of RNA polymerase II transcription subunit 28 [Dendrobium
           catenatum]
 ref|XP_020689145.1| mediator of RNA polymerase II transcription subunit 28 [Dendrobium
           catenatum]
          Length = 143

 Score = 91.7 bits (226), Expect = 8e-20
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF +         LQHEDQPTKEEMLRKEIS+ME+ELKTKSELI KHEN I  WR+
Sbjct: 77  KLQLYFIS---------LQHEDQPTKEEMLRKEISIMEDELKTKSELIKKHENRIEAWRE 127

Query: 36  ELKDQLDK 13
           ELK+QLD+
Sbjct: 128 ELKEQLDR 135


>ref|XP_020583500.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
           [Phalaenopsis equestris]
 ref|XP_020583501.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
           [Phalaenopsis equestris]
 ref|XP_020583503.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
           [Phalaenopsis equestris]
          Length = 143

 Score = 91.7 bits (226), Expect = 8e-20
 Identities = 48/68 (70%), Positives = 54/68 (79%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF +         LQHEDQPTKEEMLRKEISVMEEELKTKSELI K E LI+ WRK
Sbjct: 77  KLQLYFIS---------LQHEDQPTKEEMLRKEISVMEEELKTKSELIKKQEGLIVAWRK 127

Query: 36  ELKDQLDK 13
           ELK+QL++
Sbjct: 128 ELKEQLER 135


>ref|XP_020113534.1| mediator of RNA polymerase II transcription subunit 28 [Ananas
           comosus]
          Length = 152

 Score = 89.0 bits (219), Expect = 1e-18
 Identities = 46/68 (67%), Positives = 53/68 (77%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQ EDQPT+EEMLRKEIS+MEEELKTKSELI KHE +I GWRK
Sbjct: 86  KLQLYFIG---------LQREDQPTREEMLRKEISIMEEELKTKSELIMKHEKIIQGWRK 136

Query: 36  ELKDQLDK 13
           +LK+QLD+
Sbjct: 137 DLKEQLDR 144


>gb|OAY81348.1| Mediator of RNA polymerase II transcription subunit 28 [Ananas
           comosus]
          Length = 156

 Score = 89.0 bits (219), Expect = 1e-18
 Identities = 46/68 (67%), Positives = 53/68 (77%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQ EDQPT+EEMLRKEIS+MEEELKTKSELI KHE +I GWRK
Sbjct: 90  KLQLYFIG---------LQREDQPTREEMLRKEISIMEEELKTKSELIMKHEKIIQGWRK 140

Query: 36  ELKDQLDK 13
           +LK+QLD+
Sbjct: 141 DLKEQLDR 148


>ref|XP_009412106.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
           [Musa acuminata subsp. malaccensis]
          Length = 168

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 47/68 (69%), Positives = 53/68 (77%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQ ED+PTKEEMLRKEISVMEEELKTK+ELI KH+ LI GWRK
Sbjct: 102 KLQLYFVG---------LQREDEPTKEEMLRKEISVMEEELKTKTELIKKHQRLIDGWRK 152

Query: 36  ELKDQLDK 13
           ELK+QL+K
Sbjct: 153 ELKEQLEK 160


>gb|OVA08259.1| hypothetical protein BVC80_1101g69 [Macleaya cordata]
          Length = 269

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 48/68 (70%), Positives = 52/68 (76%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQHE+QPTKEE LRKEI+ MEEELKTK+ELI KHE LI GWRK
Sbjct: 203 KLQLYFIG---------LQHEEQPTKEETLRKEIATMEEELKTKTELIKKHEKLIQGWRK 253

Query: 36  ELKDQLDK 13
           ELKDQLDK
Sbjct: 254 ELKDQLDK 261


>gb|OVA12531.1| hypothetical protein BVC80_9011g43 [Macleaya cordata]
          Length = 135

 Score = 86.7 bits (213), Expect = 5e-18
 Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -1

Query: 243 AGCFALYSHRLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEI-SVMEEELKTKSELIDK 67
           AG F   + +LQLYF           LQHE+QPT E+ LRKEI ++MEEE+KTK+ELI K
Sbjct: 59  AGDFMEAAKKLQLYFMG---------LQHEEQPTMEKTLRKEIETIMEEEVKTKTELIKK 109

Query: 66  HENLILGWRKELKDQLDK 13
           HE LI GWRKELKDQLDK
Sbjct: 110 HEKLIQGWRKELKDQLDK 127


>emb|CBI36875.3| unnamed protein product, partial [Vitis vinifera]
          Length = 110

 Score = 83.2 bits (204), Expect = 6e-17
 Identities = 44/68 (64%), Positives = 51/68 (75%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQ+YF +         LQ EDQPTK E LRKEI+VMEEEL+ K+ELI+K E LI GWRK
Sbjct: 44  KLQVYFIS---------LQREDQPTKAETLRKEIAVMEEELRLKTELINKQERLIQGWRK 94

Query: 36  ELKDQLDK 13
           ELKDQLDK
Sbjct: 95  ELKDQLDK 102


>ref|XP_024026340.1| mediator of RNA polymerase II transcription subunit 28 [Morus
           notabilis]
 ref|XP_024026347.1| mediator of RNA polymerase II transcription subunit 28 [Morus
           notabilis]
 ref|XP_024026352.1| mediator of RNA polymerase II transcription subunit 28 [Morus
           notabilis]
 ref|XP_024026359.1| mediator of RNA polymerase II transcription subunit 28 [Morus
           notabilis]
 ref|XP_024026365.1| mediator of RNA polymerase II transcription subunit 28 [Morus
           notabilis]
          Length = 141

 Score = 83.6 bits (205), Expect = 9e-17
 Identities = 44/68 (64%), Positives = 50/68 (73%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQ E+QP K E LRKEI+ MEEELK K+E+I+KHE LILGWRK
Sbjct: 75  KLQLYFIG---------LQREEQPNKAETLRKEIAAMEEELKHKTEIINKHEKLILGWRK 125

Query: 36  ELKDQLDK 13
           ELKDQLDK
Sbjct: 126 ELKDQLDK 133


>ref|XP_002268380.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
           [Vitis vinifera]
          Length = 139

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 44/68 (64%), Positives = 51/68 (75%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQ+YF +         LQ EDQPTK E LRKEI+VMEEEL+ K+ELI+K E LI GWRK
Sbjct: 73  KLQVYFIS---------LQREDQPTKAETLRKEIAVMEEELRLKTELINKQERLIQGWRK 123

Query: 36  ELKDQLDK 13
           ELKDQLDK
Sbjct: 124 ELKDQLDK 131


>ref|XP_002440628.1| mediator of RNA polymerase II transcription subunit 28 [Sorghum
           bicolor]
 gb|OQU77460.1| hypothetical protein SORBI_3009G050200 [Sorghum bicolor]
          Length = 145

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 41/51 (80%), Positives = 44/51 (86%)
 Frame = -1

Query: 165 LQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRKELKDQLDK 13
           LQ EDQPT EEMLRKEI+ MEEELKTKSELI KH+ LI GWRKELK+QL K
Sbjct: 87  LQREDQPTAEEMLRKEITTMEEELKTKSELIAKHKKLIEGWRKELKEQLGK 137


>ref|XP_015640776.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
           [Oryza sativa Japonica Group]
 gb|AAV32216.1| unknown protein [Oryza sativa Japonica Group]
 dbj|BAF16600.1| Os05g0154900 [Oryza sativa Japonica Group]
 dbj|BAG92183.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAS92348.1| Os05g0154900 [Oryza sativa Japonica Group]
          Length = 146

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = -1

Query: 165 LQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRKELKDQLDK 13
           LQ ED+P+ EEMLRK+I++MEEELKTKSELIDKH+ LI GW+KELKDQL K
Sbjct: 88  LQREDRPSTEEMLRKDIAIMEEELKTKSELIDKHKKLIEGWQKELKDQLGK 138


>gb|KVI01417.1| hypothetical protein Ccrd_020306 [Cynara cardunculus var. scolymus]
          Length = 83

 Score = 81.3 bits (199), Expect = 1e-16
 Identities = 42/68 (61%), Positives = 52/68 (76%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQ EDQPTKEE+L+K+I++MEEE+KTK++LI K E LI GWRK
Sbjct: 17  KLQLYFIG---------LQREDQPTKEEILQKDIAMMEEEVKTKTDLIKKQERLIQGWRK 67

Query: 36  ELKDQLDK 13
           ELKDQL+K
Sbjct: 68  ELKDQLEK 75


>gb|PON65883.1| Mediator of RNA polymerase II transcription subunit [Parasponia
           andersonii]
          Length = 138

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 45/68 (66%), Positives = 49/68 (72%)
 Frame = -1

Query: 216 RLQLYFQTVETTVDVERLQHEDQPTKEEMLRKEISVMEEELKTKSELIDKHENLILGWRK 37
           +LQLYF           LQ EDQP+K E LRKEI+VMEEELK K+ELI KHE  I GWRK
Sbjct: 72  KLQLYFIG---------LQREDQPSKAETLRKEIAVMEEELKLKNELIKKHEKQIQGWRK 122

Query: 36  ELKDQLDK 13
           ELKDQLDK
Sbjct: 123 ELKDQLDK 130