BLASTX nr result
ID: Ophiopogon24_contig00011496
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00011496
(538 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020244081.1| CHD3-type chromatin-remodeling factor PICKLE... 140 3e-35
gb|ONK80017.1| uncharacterized protein A4U43_C01F12890 [Asparagu... 140 3e-35
ref|XP_020104196.1| chromodomain-helicase-DNA-binding protein 3-... 123 4e-29
gb|OAY75776.1| CHD3-type chromatin-remodeling factor PICKLE [Ana... 123 4e-29
gb|KMZ65857.1| hypothetical protein ZOSMA_309G00060 [Zostera mar... 91 7e-18
ref|XP_014754891.1| PREDICTED: chromodomain-helicase-DNA-binding... 85 2e-16
dbj|BAS75560.1| Os01g0881000 [Oryza sativa Japonica Group] 86 4e-16
gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japo... 86 4e-16
ref|XP_015639963.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type ch... 86 4e-16
dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza... 86 4e-16
gb|PNT73310.1| hypothetical protein BRADI_2g56865v3 [Brachypodiu... 85 4e-16
ref|XP_015690575.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 85 9e-16
gb|PAN27247.1| hypothetical protein PAHAL_E00729 [Panicum hallii] 84 1e-15
gb|KXG33813.2| hypothetical protein SORBI_3003G377300 [Sorghum b... 82 1e-14
ref|XP_021312012.1| CHD3-type chromatin-remodeling factor PICKLE... 82 1e-14
gb|KQL07986.1| hypothetical protein SETIT_004693mg [Setaria ital... 80 3e-14
ref|XP_022682293.1| CHD3-type chromatin-remodeling factor PICKLE... 80 3e-14
ref|XP_011628632.2| chromodomain-helicase-DNA-binding protein 3 ... 80 3e-14
ref|XP_020157969.1| chromodomain-helicase-DNA-binding protein 3-... 75 3e-12
emb|CDM85460.1| unnamed protein product [Triticum aestivum] 71 4e-11
>ref|XP_020244081.1| CHD3-type chromatin-remodeling factor PICKLE-like isoform X1
[Asparagus officinalis]
Length = 736
Score = 140 bits (353), Expect = 3e-35
Identities = 75/102 (73%), Positives = 84/102 (82%), Gaps = 4/102 (3%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
VLLHGA TILN+ NIKAT+I+YDDKAID LLKLDP PG NC+PD YLGSIQ+FVT DD
Sbjct: 601 VLLHGARTILNKENIKATTIHYDDKAIDALLKLDPEPGGNCSPDDNGYLGSIQNFVTEDD 660
Query: 364 ENDRPTSPKAEEWENILGPVE-KDTKTGILGRGKRQ-KKEVN 245
EN + +SPKA+EWENILGPVE + G LGRGKRQ KKEVN
Sbjct: 661 ENGKLSSPKAKEWENILGPVEDAKEEDGNLGRGKRQKKKEVN 702
>gb|ONK80017.1| uncharacterized protein A4U43_C01F12890 [Asparagus officinalis]
Length = 750
Score = 140 bits (353), Expect = 3e-35
Identities = 75/102 (73%), Positives = 84/102 (82%), Gaps = 4/102 (3%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
VLLHGA TILN+ NIKAT+I+YDDKAID LLKLDP PG NC+PD YLGSIQ+FVT DD
Sbjct: 615 VLLHGARTILNKENIKATTIHYDDKAIDALLKLDPEPGGNCSPDDNGYLGSIQNFVTEDD 674
Query: 364 ENDRPTSPKAEEWENILGPVE-KDTKTGILGRGKRQ-KKEVN 245
EN + +SPKA+EWENILGPVE + G LGRGKRQ KKEVN
Sbjct: 675 ENGKLSSPKAKEWENILGPVEDAKEEDGNLGRGKRQKKKEVN 716
>ref|XP_020104196.1| chromodomain-helicase-DNA-binding protein 3-like [Ananas comosus]
Length = 1024
Score = 123 bits (308), Expect = 4e-29
Identities = 67/102 (65%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
VLLHGA TILNR ++ATSI YDD AI+TLLKLDPAPG+ C+PD YLG+IQSF TGD
Sbjct: 877 VLLHGARTILNRKKVQATSILYDDNAIETLLKLDPAPGECCSPDENGYLGTIQSFNTGDA 936
Query: 364 END---RPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
EN+ +P SPKA EW+ ILGPVE + GRGKRQKK V
Sbjct: 937 ENEPPPQPHSPKAHEWKEILGPVE-EANGANFGRGKRQKKVV 977
>gb|OAY75776.1| CHD3-type chromatin-remodeling factor PICKLE [Ananas comosus]
Length = 1062
Score = 123 bits (308), Expect = 4e-29
Identities = 67/102 (65%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
VLLHGA TILNR ++ATSI YDD AI+TLLKLDPAPG+ C+PD YLG+IQSF TGD
Sbjct: 915 VLLHGARTILNRKKVQATSILYDDNAIETLLKLDPAPGECCSPDENGYLGTIQSFNTGDA 974
Query: 364 END---RPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
EN+ +P SPKA EW+ ILGPVE + GRGKRQKK V
Sbjct: 975 ENEPPPQPHSPKAHEWKEILGPVE-EANGANFGRGKRQKKVV 1015
>gb|KMZ65857.1| hypothetical protein ZOSMA_309G00060 [Zostera marina]
Length = 1035
Score = 90.9 bits (224), Expect = 7e-18
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGK--NCAPDSYLGSIQSFVTGDD 365
V+LHGA I+N NI+A I YDD AI+TL KLDP + + YL SIQSF D
Sbjct: 882 VILHGAKKIMNSKNIQAMKICYDDAAIETLFKLDPKDDEIYTSEDNGYLDSIQSFENFGD 941
Query: 364 ENDR--PTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
N+ P SPKA +W ILGP++ + TG LGRGKRQK +V
Sbjct: 942 TNEEAPPPSPKANDWAEILGPIKDE--TGDLGRGKRQKNDV 980
>ref|XP_014754891.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
[Brachypodium distachyon]
ref|XP_014754892.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
[Brachypodium distachyon]
ref|XP_014754893.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
[Brachypodium distachyon]
gb|PNT73306.1| hypothetical protein BRADI_2g56865v3 [Brachypodium distachyon]
gb|PNT73307.1| hypothetical protein BRADI_2g56865v3 [Brachypodium distachyon]
gb|PNT73308.1| hypothetical protein BRADI_2g56865v3 [Brachypodium distachyon]
gb|PNT73309.1| hypothetical protein BRADI_2g56865v3 [Brachypodium distachyon]
Length = 324
Score = 85.1 bits (209), Expect = 2e-16
Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA I+++ I ATSI+YDD+AI+ LLKLDP+ + C D YLGSI SF G
Sbjct: 139 ILLHGAKAIVDKKKISATSIHYDDEAIENLLKLDPSSDEMCKSDDNGYLGSIVSFAHG-G 197
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
E++ P SPKAE+ + +L P T LGRGKRQKK V
Sbjct: 198 EDEEPLSPKAEDLK-VLKPA---TPKVDLGRGKRQKKTV 232
>dbj|BAS75560.1| Os01g0881000 [Oryza sativa Japonica Group]
Length = 1101
Score = 85.9 bits (211), Expect = 4e-16
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R I ATSI+YD++AI+ LLKLDP+ G+ C+ D YLGSI SF G
Sbjct: 958 ILLHGAKTIVDR-KISATSIHYDNEAIENLLKLDPSTGEKCSSDDNGYLGSIVSFAHG-V 1015
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P+SPK E+ + +L P T LGRGKRQ+K VN
Sbjct: 1016 EDEAPSSPKVEDLK-VLKPA---TPKVDLGRGKRQRKVVN 1051
>gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japonica Group]
Length = 1129
Score = 85.9 bits (211), Expect = 4e-16
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R I ATSI+YD++AI+ LLKLDP+ G+ C+ D YLGSI SF G
Sbjct: 986 ILLHGAKTIVDR-KISATSIHYDNEAIENLLKLDPSTGEKCSSDDNGYLGSIVSFAHG-V 1043
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P+SPK E+ + +L P T LGRGKRQ+K VN
Sbjct: 1044 EDEAPSSPKVEDLK-VLKPA---TPKVDLGRGKRQRKVVN 1079
>ref|XP_015639963.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling factor
PICKLE [Oryza sativa Japonica Group]
Length = 1150
Score = 85.9 bits (211), Expect = 4e-16
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R I ATSI+YD++AI+ LLKLDP+ G+ C+ D YLGSI SF G
Sbjct: 1007 ILLHGAKTIVDR-KISATSIHYDNEAIENLLKLDPSTGEKCSSDDNGYLGSIVSFAHG-V 1064
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P+SPK E+ + +L P T LGRGKRQ+K VN
Sbjct: 1065 EDEAPSSPKVEDLK-VLKPA---TPKVDLGRGKRQRKVVN 1100
>dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza sativa Japonica
Group]
dbj|BAF06910.1| Os01g0881000 [Oryza sativa Japonica Group]
Length = 1150
Score = 85.9 bits (211), Expect = 4e-16
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R I ATSI+YD++AI+ LLKLDP+ G+ C+ D YLGSI SF G
Sbjct: 1007 ILLHGAKTIVDR-KISATSIHYDNEAIENLLKLDPSTGEKCSSDDNGYLGSIVSFAHG-V 1064
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P+SPK E+ + +L P T LGRGKRQ+K VN
Sbjct: 1065 EDEAPSSPKVEDLK-VLKPA---TPKVDLGRGKRQRKVVN 1100
>gb|PNT73310.1| hypothetical protein BRADI_2g56865v3 [Brachypodium distachyon]
Length = 423
Score = 85.1 bits (209), Expect = 4e-16
Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA I+++ I ATSI+YDD+AI+ LLKLDP+ + C D YLGSI SF G
Sbjct: 238 ILLHGAKAIVDKKKISATSIHYDDEAIENLLKLDPSSDEMCKSDDNGYLGSIVSFAHG-G 296
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
E++ P SPKAE+ + +L P T LGRGKRQKK V
Sbjct: 297 EDEEPLSPKAEDLK-VLKPA---TPKVDLGRGKRQKKTV 331
>ref|XP_015690575.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3-like [Oryza brachyantha]
Length = 1133
Score = 84.7 bits (208), Expect = 9e-16
Identities = 49/100 (49%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPDS--YLGSIQSFVTGDD 365
+LL+GA TI++R + ATSI+YDD+AI+ LLKLDP+ G+ C+ D+ YLGSI SF G
Sbjct: 993 ILLYGAKTIVDRKKVSATSIHYDDEAIENLLKLDPSSGEKCSSDNNGYLGSIVSFAHG-V 1051
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P+SPK ++ L ++ T LGRGKR++K VN
Sbjct: 1052 EDEVPSSPKVDD----LCVLKPATPKVDLGRGKRKRKVVN 1087
>gb|PAN27247.1| hypothetical protein PAHAL_E00729 [Panicum hallii]
Length = 1241
Score = 84.3 bits (207), Expect = 1e-15
Identities = 49/100 (49%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R + ATSI YDD+AI+ LLKLDP+ + C+ + YLGSI SF G
Sbjct: 1053 ILLHGAKTIIDRKKVSATSIQYDDEAIENLLKLDPSSEEKCSKEDNGYLGSIVSFAHG-A 1111
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P SPK E+ L ++ T LGRGKRQ++ VN
Sbjct: 1112 EDEEPGSPKVED----LRVLKPATPKVDLGRGKRQRRVVN 1147
>gb|KXG33813.2| hypothetical protein SORBI_3003G377300 [Sorghum bicolor]
Length = 1152
Score = 81.6 bits (200), Expect = 1e-14
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R I ATSI+YDD+AI LL LDP+ + C+ + YLGSI SF G
Sbjct: 956 ILLHGAKTIIDRKKISATSIHYDDEAIKDLLNLDPSSEEKCSKEDNGYLGSIVSFAHG-M 1014
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P SPK E+ + +L P T LGRGKRQ++ VN
Sbjct: 1015 EDEEPGSPKVEDLK-VLKPA---TPKVDLGRGKRQRRVVN 1050
>ref|XP_021312012.1| CHD3-type chromatin-remodeling factor PICKLE [Sorghum bicolor]
Length = 1230
Score = 81.6 bits (200), Expect = 1e-14
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R I ATSI+YDD+AI LL LDP+ + C+ + YLGSI SF G
Sbjct: 1034 ILLHGAKTIIDRKKISATSIHYDDEAIKDLLNLDPSSEEKCSKEDNGYLGSIVSFAHG-M 1092
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E++ P SPK E+ + +L P T LGRGKRQ++ VN
Sbjct: 1093 EDEEPGSPKVEDLK-VLKPA---TPKVDLGRGKRQRRVVN 1128
>gb|KQL07986.1| hypothetical protein SETIT_004693mg [Setaria italica]
Length = 1182
Score = 80.5 bits (197), Expect = 3e-14
Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R + ATSI YDD+AI+ LLKLDP C+ + YLGSI SF
Sbjct: 993 ILLHGAKTIIDRKKVSATSIYYDDEAIENLLKLDPNSEDKCSKEDNGYLGSIVSF-AHSV 1051
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E+ P SPK E+ E +L P T LGRGKRQ++ VN
Sbjct: 1052 EDQEPGSPKVEDLE-VLKPA---TPKVDLGRGKRQRRAVN 1087
>ref|XP_022682293.1| CHD3-type chromatin-remodeling factor PICKLE [Setaria italica]
Length = 1238
Score = 80.5 bits (197), Expect = 3e-14
Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI++R + ATSI YDD+AI+ LLKLDP C+ + YLGSI SF
Sbjct: 1049 ILLHGAKTIIDRKKVSATSIYYDDEAIENLLKLDPNSEDKCSKEDNGYLGSIVSF-AHSV 1107
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEVN 245
E+ P SPK E+ E +L P T LGRGKRQ++ VN
Sbjct: 1108 EDQEPGSPKVEDLE-VLKPA---TPKVDLGRGKRQRRAVN 1143
>ref|XP_011628632.2| chromodomain-helicase-DNA-binding protein 3 isoform X1 [Amborella
trichopoda]
gb|ERN19886.1| hypothetical protein AMTR_s00071p00058700 [Amborella trichopoda]
Length = 1360
Score = 80.5 bits (197), Expect = 3e-14
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSI--QSFVTG 371
+LLHGA IL++ ++ +TSI YD++AI TLL ++P + C D YLGSI +SF
Sbjct: 1202 ILLHGARKILSKQSLGSTSITYDEEAIATLLGMNPLADEKCGVDDNGYLGSIMPESFGPT 1261
Query: 370 DDENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
PKA EWE I+G D ++ LGRGKRQKK V
Sbjct: 1262 GQNEQMNLPPKANEWEEIIGHPIDDLRSEGLGRGKRQKKAV 1302
>ref|XP_020157969.1| chromodomain-helicase-DNA-binding protein 3-like [Aegilops tauschii
subsp. tauschii]
Length = 1077
Score = 74.7 bits (182), Expect = 3e-12
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA TI+++ I A SI+YDD+AID LLKLDP+ G+ C D YLGSI SF G
Sbjct: 887 ILLHGAKTIVDKKKINAVSIHYDDEAIDNLLKLDPSSGEMCTSDDNGYLGSIVSFAHG-A 945
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
E+ P SP E+ L + T LGRG+R + V
Sbjct: 946 EDVVPPSPNVED----LKVFKPATPKVDLGRGRRPRNVV 980
>emb|CDM85460.1| unnamed protein product [Triticum aestivum]
Length = 1055
Score = 71.2 bits (173), Expect = 4e-11
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = -1
Query: 538 VLLHGAHTILNRWNIKATSINYDDKAIDTLLKLDPAPGKNCAPD--SYLGSIQSFVTGDD 365
+LLHGA I ++ IKA SI+YDD+AI+ LLKLDP+ + C + YLG I+SF G
Sbjct: 834 ILLHGAKIIQDKKEIKAVSIHYDDEAIENLLKLDPSSDEMCTKEGNGYLGGIESFPHG-A 892
Query: 364 ENDRPTSPKAEEWENILGPVEKDTKTGILGRGKRQKKEV 248
E+ P SPK E+ L + T LGRG+RQ+ V
Sbjct: 893 EDVVPPSPKVED----LKVFKPATPKVDLGRGRRQRNAV 927