BLASTX nr result

ID: Ophiopogon24_contig00011425 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011425
         (632 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77484.1| uncharacterized protein A4U43_C02F7040 [Asparagus...    84   5e-15
ref|XP_020253162.1| putative CCA tRNA nucleotidyltransferase 2 [...    84   5e-15
ref|XP_009404880.1| PREDICTED: putative CCA tRNA nucleotidyltran...    63   5e-08

>gb|ONK77484.1| uncharacterized protein A4U43_C02F7040 [Asparagus officinalis]
          Length = 562

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +3

Query: 15  PSNFLSIRPKHSKLGFRLQIFTLTSNSGRRAERGRITGGPVTVK*KIDLTEKED-IFN*L 191
           P  F+S RPK  +LGFR + F+    +G   ER R+  GPVTVK KIDLTEKE+ IF  L
Sbjct: 25  PPKFISSRPKIPRLGFRFRRFSCYGAAG--VERSRLMEGPVTVKEKIDLTEKEEKIFKRL 82

Query: 192 LGVLRHFELDAHLWVAGDWVRDWIRHK 272
           L VL+HFEL+  L VAG WVRD +  K
Sbjct: 83  LDVLKHFELETQLRVAGGWVRDKLLDK 109


>ref|XP_020253162.1| putative CCA tRNA nucleotidyltransferase 2 [Asparagus officinalis]
          Length = 575

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 48/87 (55%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +3

Query: 15  PSNFLSIRPKHSKLGFRLQIFTLTSNSGRRAERGRITGGPVTVK*KIDLTEKED-IFN*L 191
           P  F+S RPK  +LGFR + F+    +G   ER R+  GPVTVK KIDLTEKE+ IF  L
Sbjct: 25  PPKFISSRPKIPRLGFRFRRFSCYGAAG--VERSRLMEGPVTVKEKIDLTEKEEKIFKRL 82

Query: 192 LGVLRHFELDAHLWVAGDWVRDWIRHK 272
           L VL+HFEL+  L VAG WVRD +  K
Sbjct: 83  LDVLKHFELETQLRVAGGWVRDKLLDK 109


>ref|XP_009404880.1| PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Musa
           acuminata subsp. malaccensis]
          Length = 576

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
 Frame = +3

Query: 3   LRFSPSNF-LS--IRPKHSK-LGFRLQIFTLTSNSGRRAERGRITGGPVTVK*KIDLTEK 170
           LRF P    LS  +RP  S+ LGFRL+   L S  G   +R R+   P TVK +IDLT+K
Sbjct: 16  LRFPPLRLPLSQILRPPPSRRLGFRLR--GLCSRGGSATDR-RVMEAPFTVKERIDLTKK 72

Query: 171 ED-IFN*LLGVLRHFELDAHLWVAGDWVRD 257
           E+ IF  LL V+RHF+L+  L VAG WVRD
Sbjct: 73  EEKIFQRLLDVIRHFKLETQLRVAGGWVRD 102


Top