BLASTX nr result

ID: Ophiopogon24_contig00011351 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011351
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075938.1| RNA-binding protein 1-like isoform X3 [Sesam...    61   1e-08
gb|AQK58927.1| Nuclear speckle RNA-binding protein A [Zea mays]        59   1e-08
gb|KQK11863.2| hypothetical protein BRADI_1g00215v3 [Brachypodiu...    59   2e-08
gb|AQK58929.1| Nuclear speckle RNA-binding protein A [Zea mays]        60   2e-08
ref|XP_011075937.1| RNA-binding protein 1-like isoform X2 [Sesam...    61   2e-08
ref|XP_011075936.1| RNA-binding protein 1-like isoform X1 [Sesam...    61   2e-08
ref|XP_002275189.2| PREDICTED: RNA-binding protein 1 isoform X2 ...    61   2e-08
ref|XP_010662904.1| PREDICTED: RNA-binding protein 1 isoform X1 ...    61   2e-08
emb|CDP05041.1| unnamed protein product [Coffea canephora]             61   2e-08
gb|AQK58920.1| Nuclear speckle RNA-binding protein A [Zea mays]        60   2e-08
sp|Q6JB11.1|MEG5_MAIZE RecName: Full=Protein MATERNALLY EXPRESSE...    60   2e-08
gb|AQK58930.1| Nuclear speckle RNA-binding protein A [Zea mays]        60   2e-08
ref|XP_010252587.1| PREDICTED: RNA-binding protein 1-like isofor...    60   2e-08
gb|PKA50233.1| U2 small nuclear ribonucleoprotein B'' [Apostasia...    60   3e-08
ref|XP_020685340.1| RNA-binding protein 1-like [Dendrobium caten...    60   3e-08
ref|XP_010252574.1| PREDICTED: RNA-binding protein 1-like isofor...    60   3e-08
ref|XP_010933806.1| PREDICTED: protein MATERNALLY EXPRESSED GENE...    59   4e-08
gb|AQK58926.1| Nuclear speckle RNA-binding protein A [Zea mays]        60   5e-08
gb|PON72014.1| U1 small nuclear ribonucleoprotein A/U2 small nuc...    60   5e-08
ref|XP_024029775.1| RNA-binding protein 1 [Morus notabilis]            60   5e-08

>ref|XP_011075938.1| RNA-binding protein 1-like isoform X3 [Sesamum indicum]
          Length = 201

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREVSHI
Sbjct: 119 EVPLPPDASSTLFVEGLPANCTRREVSHI 147


>gb|AQK58927.1| Nuclear speckle RNA-binding protein A [Zea mays]
          Length = 101

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHILV 98
           E PLPPDASSTL++EGLPANCTRREVS IL+
Sbjct: 63  EPPLPPDASSTLYIEGLPANCTRREVSRILL 93


>gb|KQK11863.2| hypothetical protein BRADI_1g00215v3 [Brachypodium distachyon]
          Length = 105

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           + PLPPDASSTL++EGLPANCTRREVSHI
Sbjct: 29  DPPLPPDASSTLYIEGLPANCTRREVSHI 57


>gb|AQK58929.1| Nuclear speckle RNA-binding protein A [Zea mays]
          Length = 157

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTL++EGLPANCTRREVSHI
Sbjct: 49  EPPLPPDASSTLYIEGLPANCTRREVSHI 77


>ref|XP_011075937.1| RNA-binding protein 1-like isoform X2 [Sesamum indicum]
          Length = 226

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREVSHI
Sbjct: 118 EVPLPPDASSTLFVEGLPANCTRREVSHI 146


>ref|XP_011075936.1| RNA-binding protein 1-like isoform X1 [Sesamum indicum]
 ref|XP_020549012.1| RNA-binding protein 1-like isoform X1 [Sesamum indicum]
          Length = 227

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREVSHI
Sbjct: 119 EVPLPPDASSTLFVEGLPANCTRREVSHI 147


>ref|XP_002275189.2| PREDICTED: RNA-binding protein 1 isoform X2 [Vitis vinifera]
          Length = 229

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREVSHI
Sbjct: 121 ELPLPPDASSTLFVEGLPANCTRREVSHI 149


>ref|XP_010662904.1| PREDICTED: RNA-binding protein 1 isoform X1 [Vitis vinifera]
 emb|CBI23047.3| unnamed protein product, partial [Vitis vinifera]
          Length = 230

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREVSHI
Sbjct: 122 ELPLPPDASSTLFVEGLPANCTRREVSHI 150


>emb|CDP05041.1| unnamed protein product [Coffea canephora]
          Length = 234

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREVSHI
Sbjct: 126 ELPLPPDASSTLFVEGLPANCTRREVSHI 154


>gb|AQK58920.1| Nuclear speckle RNA-binding protein A [Zea mays]
          Length = 163

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTL++EGLPANCTRREVSHI
Sbjct: 19  EPPLPPDASSTLYIEGLPANCTRREVSHI 47


>sp|Q6JB11.1|MEG5_MAIZE RecName: Full=Protein MATERNALLY EXPRESSED GENE 5
 gb|AAT09814.1| MEG5 [Zea mays]
          Length = 163

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTL++EGLPANCTRREVSHI
Sbjct: 29  EPPLPPDASSTLYIEGLPANCTRREVSHI 57


>gb|AQK58930.1| Nuclear speckle RNA-binding protein A [Zea mays]
          Length = 171

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTL++EGLPANCTRREVSHI
Sbjct: 63  EPPLPPDASSTLYIEGLPANCTRREVSHI 91


>ref|XP_010252587.1| PREDICTED: RNA-binding protein 1-like isoform X2 [Nelumbo nucifera]
          Length = 199

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDAS+TLFVEGLPANCTRREVSHI
Sbjct: 123 EMPLPPDASNTLFVEGLPANCTRREVSHI 151


>gb|PKA50233.1| U2 small nuclear ribonucleoprotein B'' [Apostasia shenzhenica]
          Length = 195

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDAS+TLFVEGLPANCTRREVSH+
Sbjct: 113 EPPLPPDASNTLFVEGLPANCTRREVSHV 141


>ref|XP_020685340.1| RNA-binding protein 1-like [Dendrobium catenatum]
          Length = 224

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDAS+TLFVEGLPANCTRREVSHI
Sbjct: 117 EAPLPPDASNTLFVEGLPANCTRREVSHI 145


>ref|XP_010252574.1| PREDICTED: RNA-binding protein 1-like isoform X1 [Nelumbo nucifera]
 ref|XP_010252580.1| PREDICTED: RNA-binding protein 1-like isoform X1 [Nelumbo nucifera]
          Length = 231

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDAS+TLFVEGLPANCTRREVSHI
Sbjct: 123 EMPLPPDASNTLFVEGLPANCTRREVSHI 151


>ref|XP_010933806.1| PREDICTED: protein MATERNALLY EXPRESSED GENE 5 isoform X4 [Elaeis
           guineensis]
          Length = 198

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDAS TLFVEGLPANCTRREVSHI
Sbjct: 122 ETPLPPDASCTLFVEGLPANCTRREVSHI 150


>gb|AQK58926.1| Nuclear speckle RNA-binding protein A [Zea mays]
          Length = 231

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTL++EGLPANCTRREVSHI
Sbjct: 123 EPPLPPDASSTLYIEGLPANCTRREVSHI 151


>gb|PON72014.1| U1 small nuclear ribonucleoprotein A/U2 small nuclear
           ribonucleoprotein B'' [Parasponia andersonii]
          Length = 232

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREV+HI
Sbjct: 124 EVPLPPDASSTLFVEGLPANCTRREVAHI 152


>ref|XP_024029775.1| RNA-binding protein 1 [Morus notabilis]
          Length = 233

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 6   EKPLPPDASSTLFVEGLPANCTRREVSHI 92
           E PLPPDASSTLFVEGLPANCTRREV+HI
Sbjct: 125 EVPLPPDASSTLFVEGLPANCTRREVAHI 153


Top