BLASTX nr result

ID: Ophiopogon24_contig00011218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011218
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268057.1| protein MODIFIER OF SNC1 1-like [Asparagus o...    92   2e-18
gb|ONK67638.1| uncharacterized protein A4U43_C05F2160 [Asparagus...    88   3e-17
ref|XP_020264187.1| LOW QUALITY PROTEIN: protein MODIFIER OF SNC...    88   3e-17

>ref|XP_020268057.1| protein MODIFIER OF SNC1 1-like [Asparagus officinalis]
          Length = 1430

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 63/151 (41%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
 Frame = -3

Query: 470  DSGIKKPAFSSDLS--SNVVAQASCXXXXXXXXXXXXXXXXXQENNAPTKTTLVTTSDIQ 297
            DSG KKPA +S  S  S+VV +A                    E     +  L TTSDI 
Sbjct: 857  DSGGKKPAQTSSSSGQSSVVTEARAVSPGQ-------------EIKPTVEIALETTSDIL 903

Query: 296  HNMFSKQKQVGYRKKHGIPQENSMGGKQRNAGSVGSLKDTGEIAASASSKVTLPNNEDPP 117
            HN  S+QKQVGYRKK+ I  ENS GGKQ  + S+G+ KDT +I  +ASS  +LPNN+ P 
Sbjct: 904  HNTISRQKQVGYRKKNNILLENSTGGKQTTSSSIGNHKDTVKIEVNASSNDSLPNNKVPH 963

Query: 116  VQHXXXXXXXXXXXXXXKLDEGQTNSTFTSP 24
            VQH                DE  T+ST ++P
Sbjct: 964  VQHKKNNRSARSSGDDN--DESLTSSTVSAP 992


>gb|ONK67638.1| uncharacterized protein A4U43_C05F2160 [Asparagus officinalis]
          Length = 578

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 60/157 (38%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 DSGIKKPA--FSSDLSSNVVAQASCXXXXXXXXXXXXXXXXXQENNAPTKTTLVTTSDIQ 297
           DSG KKPA   SS + S+VV +A                    E     +     TSDI 
Sbjct: 6   DSGGKKPAQSLSSSVQSSVVTEAQSVSLGQ-------------EIKTTGEIAPEATSDIL 52

Query: 296 HNMFSKQKQVGYRKKHGIPQENSMGGKQRNAGSVGSLKDTGEIAASASSKVTLPNNEDPP 117
           HN  S+QKQ+GYRKK+ I  EN  GGKQ  + S+G+ KDT E+  + SSK +LPNNE P 
Sbjct: 53  HNTVSRQKQLGYRKKNNILHENIAGGKQTTSSSIGNPKDTIEVEVNTSSKDSLPNNEVPH 112

Query: 116 VQHXXXXXXXXXXXXXXKLDEGQTNSTFTSPLQMERN 6
           VQH                DE  T+S  ++P  +  N
Sbjct: 113 VQHKKNNRSTRSSSDDN--DESMTSSAVSAPFNVGGN 147


>ref|XP_020264187.1| LOW QUALITY PROTEIN: protein MODIFIER OF SNC1 1-like, partial
            [Asparagus officinalis]
          Length = 1437

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 60/157 (38%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470  DSGIKKPA--FSSDLSSNVVAQASCXXXXXXXXXXXXXXXXXQENNAPTKTTLVTTSDIQ 297
            DSG KKPA   SS + S+VV +A                    E     +     TSDI 
Sbjct: 865  DSGGKKPAQSLSSSVQSSVVTEAQSVSLGQ-------------EIKTTGEIAPEATSDIL 911

Query: 296  HNMFSKQKQVGYRKKHGIPQENSMGGKQRNAGSVGSLKDTGEIAASASSKVTLPNNEDPP 117
            HN  S+QKQ+GYRKK+ I  EN  GGKQ  + S+G+ KDT E+  + SSK +LPNNE P 
Sbjct: 912  HNTVSRQKQLGYRKKNNILHENIAGGKQTTSSSIGNPKDTIEVEVNTSSKDSLPNNEVPH 971

Query: 116  VQHXXXXXXXXXXXXXXKLDEGQTNSTFTSPLQMERN 6
            VQH                DE  T+S  ++P  +  N
Sbjct: 972  VQHKKNNRSTRSSSDDN--DESMTSSAVSAPFNVGGN 1006


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