BLASTX nr result

ID: Ophiopogon24_contig00011118 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011118
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF04825.2| Os01g0327900 [Oryza sativa Japonica Group] >gi|9...    56   6e-06
dbj|BAD52619.1| hypothetical protein [Oryza sativa Japonica Group]     56   6e-06
ref|XP_015618720.1| PREDICTED: F-box protein At5g25290 [Oryza sa...    56   6e-06
gb|EAY73812.1| hypothetical protein OsI_01688 [Oryza sativa Indi...    56   6e-06
gb|PAN19107.1| hypothetical protein PAHAL_C02703 [Panicum hallii]      55   8e-06
gb|PAN22460.1| hypothetical protein PAHAL_D00074 [Panicum hallii]      55   9e-06

>dbj|BAF04825.2| Os01g0327900 [Oryza sativa Japonica Group]
 dbj|BAS71886.1| Os01g0327900 [Oryza sativa Japonica Group]
          Length = 419

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
 Frame = -1

Query: 514 SPEAAKSMDWSQLPSDLLEKIAGALDEEIADRIRFSAVCKPWQ-SALKSATXXXXXXXXX 338
           +P +   +DWSQLP+DLL +I G L  EI D      VC+ W  S L++           
Sbjct: 18  APPSTPGLDWSQLPADLLIRIFGTL--EITDIFSSGVVCRSWHASYLEARRLGICSNNPG 75

Query: 337 XXXSNRTSFSDPYVLRVLSLPESKTY--ALPLRKTRRGYIFAAHRDFFLTASFRQTSALL 164
                 +S  DP V  + SL   K Y   +P    R  YI  +   + +TA  R    L+
Sbjct: 76  PCLVFSSSDRDPSVATLHSLTTGKDYYVTMPDPPFRTRYIVGSSHGWLITADERSNLLLV 135

Query: 163 NPITGAR 143
           NP T A+
Sbjct: 136 NPATQAQ 142


>dbj|BAD52619.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 426

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
 Frame = -1

Query: 514 SPEAAKSMDWSQLPSDLLEKIAGALDEEIADRIRFSAVCKPWQ-SALKSATXXXXXXXXX 338
           +P +   +DWSQLP+DLL +I G L  EI D      VC+ W  S L++           
Sbjct: 18  APPSTPGLDWSQLPADLLIRIFGTL--EITDIFSSGVVCRSWHASYLEARRLGICSNNPG 75

Query: 337 XXXSNRTSFSDPYVLRVLSLPESKTY--ALPLRKTRRGYIFAAHRDFFLTASFRQTSALL 164
                 +S  DP V  + SL   K Y   +P    R  YI  +   + +TA  R    L+
Sbjct: 76  PCLVFSSSDRDPSVATLHSLTTGKDYYVTMPDPPFRTRYIVGSSHGWLITADERSNLLLV 135

Query: 163 NPITGAR 143
           NP T A+
Sbjct: 136 NPATQAQ 142


>ref|XP_015618720.1| PREDICTED: F-box protein At5g25290 [Oryza sativa Japonica Group]
          Length = 433

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
 Frame = -1

Query: 514 SPEAAKSMDWSQLPSDLLEKIAGALDEEIADRIRFSAVCKPWQ-SALKSATXXXXXXXXX 338
           +P +   +DWSQLP+DLL +I G L  EI D      VC+ W  S L++           
Sbjct: 18  APPSTPGLDWSQLPADLLIRIFGTL--EITDIFSSGVVCRSWHASYLEARRLGICSNNPG 75

Query: 337 XXXSNRTSFSDPYVLRVLSLPESKTY--ALPLRKTRRGYIFAAHRDFFLTASFRQTSALL 164
                 +S  DP V  + SL   K Y   +P    R  YI  +   + +TA  R    L+
Sbjct: 76  PCLVFSSSDRDPSVATLHSLTTGKDYYVTMPDPPFRTRYIVGSSHGWLITADERSNLLLV 135

Query: 163 NPITGAR 143
           NP T A+
Sbjct: 136 NPATQAQ 142


>gb|EAY73812.1| hypothetical protein OsI_01688 [Oryza sativa Indica Group]
          Length = 439

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
 Frame = -1

Query: 514 SPEAAKSMDWSQLPSDLLEKIAGALDEEIADRIRFSAVCKPWQ-SALKSATXXXXXXXXX 338
           +P +   +DWSQLP+DLL +I G L  EI D      VC+ W  S L++           
Sbjct: 18  APPSTPGLDWSQLPADLLIRIFGTL--EITDIFSSGVVCRSWHASYLEARRLGICSNNPG 75

Query: 337 XXXSNRTSFSDPYVLRVLSLPESKTY--ALPLRKTRRGYIFAAHRDFFLTASFRQTSALL 164
                 +S  DP V  + SL   K Y   +P    R  YI  +   + +TA  R    L+
Sbjct: 76  PCLVFSSSDRDPSVATLHSLTTGKDYYVTMPDPPFRTRYIVGSSHGWLITADERSNLLLV 135

Query: 163 NPITGAR 143
           NP T A+
Sbjct: 136 NPATQAQ 142


>gb|PAN19107.1| hypothetical protein PAHAL_C02703 [Panicum hallii]
          Length = 379

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = -1

Query: 493 MDWSQLPSDLLEKIAGALDEEIADRIRFSAVCKPWQSALKSATXXXXXXXXXXXXSNRTS 314
           MDWS LP+DL+  +A  L  E+AD  RF +VC+PW+S    +                 S
Sbjct: 1   MDWSDLPADLVAAVADRLGTELADLARFRSVCRPWRS---GSAAHAARLRVPLLLIPMMS 57

Query: 313 FSDPYVLRVLSLPESKTYALPLRKTRRG--YIFAAHRDFFLT 194
           +       V SL + +    PL + R G  ++FA+H  + LT
Sbjct: 58  YDTSAERLVWSLADDRLREAPLPEARGGHSFVFASHHGWILT 99


>gb|PAN22460.1| hypothetical protein PAHAL_D00074 [Panicum hallii]
          Length = 511

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
 Frame = -1

Query: 487 WSQLPSDLLEKIAGALDEEIADRIRFSAVCKPWQSALKSATXXXXXXXXXXXXSNRTS-- 314
           W+ LP DLLE + G L   + DR+RF AVC  WQSA  +               N T+  
Sbjct: 59  WADLPRDLLESVLGRLP--VPDRLRFPAVCTAWQSASGAPGSAAPLSPWLMLPFNPTARR 116

Query: 313 ---------FSDPYVLRVLSLPESKTYALPLRKTRRGYIFAAHR--------DFFLTASF 185
                    FS+    R LSL E + YA+     R+    A+HR         + +TA  
Sbjct: 117 GGGGGGDAKFSE---ARFLSLAEGRAYAI-----RQPAPAASHRLCVGSSPDGWLVTADA 168

Query: 184 RQTSALLNPITGAR 143
           R    LLNP+TGA+
Sbjct: 169 RSELQLLNPVTGAQ 182


Top