BLASTX nr result

ID: Ophiopogon24_contig00011079 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00011079
         (817 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019374343.1| PREDICTED: YLP motif-containing protein 1 is...    52   2e-06
ref|XP_019374344.1| PREDICTED: YLP motif-containing protein 1 is...    52   2e-06

>ref|XP_019374343.1| PREDICTED: YLP motif-containing protein 1 isoform X1 [Gavialis
           gangeticus]
          Length = 2010

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 28/90 (31%), Positives = 39/90 (43%)
 Frame = -2

Query: 369 EGKSKGPLLTRXXXXXXXXXXXXEVARQGRGEGHKQRSIDEGEGRGQSFDR*GREEGCGR 190
           E + KGP+++                R   G G  Q  ++EG GRG      GR  G GR
Sbjct: 647 ENRVKGPVMSESNRGTGPVSRGRGQGRMDDGRGRGQGRMEEGRGRGMGRMEEGRGRGMGR 706

Query: 189 STRERGGGAASIDEGEGRGRRSIDEGEEKG 100
                G G   ++EG GRG   ++EG  +G
Sbjct: 707 MEEGHGRGMGRMEEGHGRGMGRMEEGHGRG 736



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1

Query: 124 DRRGRGEGSEVDRQGRGWGRSFDR*GKG 41
           D RGRG G   D +GRG+ R  D  G+G
Sbjct: 753 DGRGRGMGRMDDGRGRGYSRMDDGCGRG 780


>ref|XP_019374344.1| PREDICTED: YLP motif-containing protein 1 isoform X2 [Gavialis
           gangeticus]
          Length = 1950

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 28/90 (31%), Positives = 39/90 (43%)
 Frame = -2

Query: 369 EGKSKGPLLTRXXXXXXXXXXXXEVARQGRGEGHKQRSIDEGEGRGQSFDR*GREEGCGR 190
           E + KGP+++                R   G G  Q  ++EG GRG      GR  G GR
Sbjct: 647 ENRVKGPVMSESNRGTGPVSRGRGQGRMDDGRGRGQGRMEEGRGRGMGRMEEGRGRGMGR 706

Query: 189 STRERGGGAASIDEGEGRGRRSIDEGEEKG 100
                G G   ++EG GRG   ++EG  +G
Sbjct: 707 MEEGHGRGMGRMEEGHGRGMGRMEEGHGRG 736



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1

Query: 124 DRRGRGEGSEVDRQGRGWGRSFDR*GKG 41
           D RGRG G   D +GRG+ R  D  G+G
Sbjct: 753 DGRGRGMGRMDDGRGRGYSRMDDGCGRG 780


Top