BLASTX nr result

ID: Ophiopogon24_contig00010758 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00010758
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU20423.1| unknown [Glycine max]                                   60   3e-09
ref|XP_008365511.1| PREDICTED: tryptophan synthase beta chain 2,...    63   4e-09
gb|PNX54529.1| tryptophan synthase beta chain 2 chloroplastic-li...    58   6e-09
ref|XP_024012591.1| tryptophan synthase beta chain 1, chloroplas...    59   7e-09
ref|XP_014617105.1| PREDICTED: tryptophan synthase beta chain 2,...    60   7e-09
ref|XP_020702921.1| tryptophan synthase beta chain 1 [Dendrobium...    63   7e-09
ref|XP_021593326.1| tryptophan synthase beta chain 2, chloroplas...    62   9e-09
ref|XP_014517041.1| tryptophan synthase beta chain 2, chloroplas...    62   9e-09
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...    62   1e-08
ref|XP_021593325.1| tryptophan synthase beta chain 1 isoform X1 ...    62   1e-08
ref|XP_009632054.1| PREDICTED: tryptophan synthase beta chain 1 ...    62   1e-08
ref|XP_021685868.1| tryptophan synthase beta chain 1 isoform X1 ...    62   1e-08
gb|PNX91669.1| tryptophan synthase beta chain 2 chloroplastic-li...    59   1e-08
ref|XP_015955182.1| tryptophan synthase beta chain 2, chloroplas...    62   1e-08
ref|XP_006368050.2| PREDICTED: tryptophan synthase beta chain 2,...    61   1e-08
gb|KFK27094.1| hypothetical protein AALP_AA8G333300 [Arabis alpina]    62   1e-08
ref|XP_012462835.1| PREDICTED: tryptophan synthase beta chain 1 ...    62   1e-08
ref|XP_013705719.1| tryptophan synthase beta chain 2, chloroplas...    58   1e-08
gb|PRQ24937.1| putative tryptophan synthase [Rosa chinensis]           61   1e-08
ref|XP_010931811.1| PREDICTED: tryptophan synthase beta chain 1 ...    62   2e-08

>gb|ACU20423.1| unknown [Glycine max]
          Length = 110

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           +SRLEGIIPA ETSHALA+LEK+ PTLPNGAKVV    G     V
Sbjct: 57  VSRLEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDV 101


>ref|XP_008365511.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic, partial
           [Malus domestica]
 ref|XP_008345055.2| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like,
           partial [Malus domestica]
          Length = 265

 Score = 62.8 bits (151), Expect = 4e-09
 Identities = 33/45 (73%), Positives = 34/45 (75%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           LSRLEGIIPA ETSHALA+LEKL PTLPNGAKVV    G     V
Sbjct: 212 LSRLEGIIPALETSHALAYLEKLCPTLPNGAKVVLNCSGRGDKDV 256


>gb|PNX54529.1| tryptophan synthase beta chain 2 chloroplastic-like, partial
           [Trifolium pratense]
          Length = 58

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVV 282
           +S+LEGIIPA ETSHALA+LEKL PTLPNG KVV
Sbjct: 5   VSQLEGIIPALETSHALAYLEKLCPTLPNGTKVV 38


>ref|XP_024012591.1| tryptophan synthase beta chain 1, chloroplastic [Eutrema
           salsugineum]
          Length = 74

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 31/53 (58%), Positives = 35/53 (66%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAVANQTE 225
           +SRLEGIIPA ETSHALA L+KL PTLP+G +VV    G     V  VA   E
Sbjct: 21  VSRLEGIIPALETSHALAHLDKLCPTLPDGTRVVLNFSGRGDKDVQTVAKYLE 73


>ref|XP_014617105.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
 gb|KRH37954.1| hypothetical protein GLYMA_09G101000 [Glycine max]
          Length = 154

 Score = 60.5 bits (145), Expect = 7e-09
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           +SRLEGIIPA ETSHALA+LEK+ PTLPNGAKVV    G     V
Sbjct: 102 VSRLEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDV 146


>ref|XP_020702921.1| tryptophan synthase beta chain 1 [Dendrobium catenatum]
          Length = 475

 Score = 62.8 bits (151), Expect = 7e-09
 Identities = 33/45 (73%), Positives = 34/45 (75%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           LSRLEGIIPA ETSHALA+LEKL PTLPNGAKVV    G     V
Sbjct: 422 LSRLEGIIPALETSHALAYLEKLCPTLPNGAKVVINCSGRGDKDV 466


>ref|XP_021593326.1| tryptophan synthase beta chain 2, chloroplastic isoform X2 [Manihot
           esculenta]
          Length = 381

 Score = 62.4 bits (150), Expect = 9e-09
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAA 243
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V A
Sbjct: 328 LSRLEGIIPALETSHALAYLEKLSPTLPNGTKVVLNCSGRGDKDVQA 374


>ref|XP_014517041.1| tryptophan synthase beta chain 2, chloroplastic [Vigna radiata var.
           radiata]
          Length = 408

 Score = 62.4 bits (150), Expect = 9e-09
 Identities = 33/50 (66%), Positives = 34/50 (68%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAVAN 234
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V    N
Sbjct: 355 LSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTALN 404


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
           Flags: Precursor
 gb|AAB97087.1| tryptophan synthase beta subunit [Camptotheca acuminata]
 gb|AAB97526.1| tryptophan synthase beta [Camptotheca acuminata]
          Length = 466

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 33/45 (73%), Positives = 33/45 (73%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           LSRLEGIIPA ETSHALAFLEKL PTLPNG KVV    G     V
Sbjct: 413 LSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDV 457


>ref|XP_021593325.1| tryptophan synthase beta chain 1 isoform X1 [Manihot esculenta]
 gb|OAY28540.1| hypothetical protein MANES_15G074600 [Manihot esculenta]
          Length = 468

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAA 243
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V A
Sbjct: 415 LSRLEGIIPALETSHALAYLEKLSPTLPNGTKVVLNCSGRGDKDVQA 461


>ref|XP_009632054.1| PREDICTED: tryptophan synthase beta chain 1 [Nicotiana
           tomentosiformis]
 ref|XP_016488945.1| PREDICTED: tryptophan synthase beta chain 1 [Nicotiana tabacum]
          Length = 471

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 33/50 (66%), Positives = 34/50 (68%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAVAN 234
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V    N
Sbjct: 418 LSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIN 467


>ref|XP_021685868.1| tryptophan synthase beta chain 1 isoform X1 [Hevea brasiliensis]
 ref|XP_021685869.1| tryptophan synthase beta chain 1 isoform X2 [Hevea brasiliensis]
          Length = 473

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVV 282
           LSRLEGIIPA ETSHALA+LEKL PTLPNGAKVV
Sbjct: 420 LSRLEGIIPALETSHALAYLEKLSPTLPNGAKVV 453


>gb|PNX91669.1| tryptophan synthase beta chain 2 chloroplastic-like, partial
           [Trifolium pratense]
          Length = 120

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           +SRLEGIIPA ETSHALA+LEK+ PTLPNG KVV    G     V
Sbjct: 67  VSRLEGIIPALETSHALAYLEKICPTLPNGTKVVVNFSGRGDKDV 111


>ref|XP_015955182.1| tryptophan synthase beta chain 2, chloroplastic [Arachis
           duranensis]
          Length = 409

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 33/48 (68%), Positives = 34/48 (70%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAV 240
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V  V
Sbjct: 356 LSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTV 403


>ref|XP_006368050.2| PREDICTED: tryptophan synthase beta chain 2, chloroplastic, partial
           [Solanum tuberosum]
          Length = 246

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 32/45 (71%), Positives = 33/45 (73%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V
Sbjct: 193 LSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDV 237


>gb|KFK27094.1| hypothetical protein AALP_AA8G333300 [Arabis alpina]
          Length = 466

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAVANQTE 225
           +SRLEGIIPA ETSHALA LEKL PTLPNG++VV    G     V  VA   E
Sbjct: 413 VSRLEGIIPALETSHALAHLEKLCPTLPNGSRVVLNFSGRGDKDVQTVAKYLE 465


>ref|XP_012462835.1| PREDICTED: tryptophan synthase beta chain 1 [Gossypium raimondii]
 gb|KJB81788.1| hypothetical protein B456_013G161300 [Gossypium raimondii]
          Length = 477

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 33/48 (68%), Positives = 34/48 (70%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAV 240
           LSRLEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V  V
Sbjct: 424 LSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTV 471


>ref|XP_013705719.1| tryptophan synthase beta chain 2, chloroplastic-like [Brassica
           napus]
          Length = 74

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 31/53 (58%), Positives = 34/53 (64%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAVANQTE 225
           +SRLEGIIPA ETSHALA LEKL PTLP+GA+VV    G     V       E
Sbjct: 21  VSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLE 73


>gb|PRQ24937.1| putative tryptophan synthase [Rosa chinensis]
          Length = 259

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 32/45 (71%), Positives = 34/45 (75%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTV 249
           LS+LEGIIPA ETSHALA+LEKL PTLPNGAKVV    G     V
Sbjct: 206 LSQLEGIIPALETSHALAYLEKLCPTLPNGAKVVLNCSGRGDKDV 250


>ref|XP_010931811.1| PREDICTED: tryptophan synthase beta chain 1 [Elaeis guineensis]
          Length = 472

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 33/53 (62%), Positives = 35/53 (66%)
 Frame = -3

Query: 383 LSRLEGIIPAQETSHALAFLEKLFPTLPNGAKVVFPEGGNSSGTVAAVANQTE 225
           LS+LEGIIPA ETSHALA+LEKL PTLPNG KVV    G     V   A   E
Sbjct: 419 LSQLEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTAAKYLE 471


Top