BLASTX nr result
ID: Ophiopogon24_contig00010468
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00010468
(5375 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophio... 665 0.0
gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Lirio... 664 0.0
ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [... 661 0.0
ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [... 660 0.0
gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maian... 659 0.0
gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscu... 658 0.0
gb|AEZ49457.1| RNA polymerase alpha subunit, partial (plastid) [... 657 0.0
ref|YP_009335365.1| RNA polymerase alpha subunit (chloroplast) [... 657 0.0
ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [... 657 0.0
gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasyl... 656 0.0
gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Beauc... 654 0.0
gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behni... 654 0.0
ref|YP_009335620.1| RNA polymerase alpha subunit (chloroplast) [... 651 0.0
ref|YP_009335111.1| RNA polymerase alpha subunit (chloroplast) [... 649 0.0
gb|AEZ49448.1| RNA polymerase alpha subunit, partial (plastid) [... 648 0.0
ref|YP_009045598.1| RNA polymerase alpha subunit (chloroplast) [... 648 0.0
ref|YP_009334607.1| RNA polymerase alpha subunit (chloroplast) [... 647 0.0
ref|YP_009334860.1| RNA polymerase alpha subunit (chloroplast) [... 647 0.0
ref|YP_009327335.1| RNA polymerase alpha subunit (chloroplast) [... 646 0.0
ref|YP_009334776.1| RNA polymerase alpha subunit (chloroplast) [... 645 0.0
>gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophiopogon japonicus]
Length = 339
Score = 665 bits (1716), Expect = 0.0
Identities = 331/336 (98%), Positives = 332/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTI+GIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIIGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 336
>gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Liriope spicata]
Length = 339
Score = 664 bits (1713), Expect = 0.0
Identities = 331/336 (98%), Positives = 332/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRT+DIKQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTKDIKQILDTLQKHFAINLPKNK 336
>ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26686.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
Length = 339
Score = 661 bits (1706), Expect = 0.0
Identities = 329/336 (97%), Positives = 331/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
verticillatum]
gb|ALM87736.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
verticillatum]
Length = 342
Score = 660 bits (1703), Expect = 0.0
Identities = 328/336 (97%), Positives = 331/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLK+N+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKRNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum stellatum]
Length = 339
Score = 659 bits (1699), Expect = 0.0
Identities = 328/336 (97%), Positives = 330/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQN LTNLKKN+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNGLTNLKKNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscus aculeatus]
Length = 339
Score = 658 bits (1698), Expect = 0.0
Identities = 327/336 (97%), Positives = 330/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNS DG+YPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSHDGNYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>gb|AEZ49457.1| RNA polymerase alpha subunit, partial (plastid) [Nolina atopocarpa]
Length = 337
Score = 657 bits (1696), Expect = 0.0
Identities = 326/336 (97%), Positives = 330/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLL+
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLN 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKH AINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHLAINLPKNK 336
>ref|YP_009335365.1| RNA polymerase alpha subunit (chloroplast) [Nolina atopocarpa]
gb|APO12423.1| RNA polymerase alpha subunit (chloroplast) [Nolina atopocarpa]
Length = 339
Score = 657 bits (1696), Expect = 0.0
Identities = 326/336 (97%), Positives = 330/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLL+
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLN 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKH AINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHLAINLPKNK 336
>ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum stenophyllum]
gb|ATB18590.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum stenophyllum]
Length = 342
Score = 657 bits (1695), Expect = 0.0
Identities = 327/336 (97%), Positives = 330/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLK+N+KGIPLKCIFIDQ ELP RTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKRNKKGIPLKCIFIDQSELPSRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasylirion wheeleri]
Length = 339
Score = 656 bits (1692), Expect = 0.0
Identities = 326/336 (97%), Positives = 330/336 (98%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQ ELPPRTYNCLKRSNIHTLLDLL+
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQSELPPRTYNCLKRSNIHTLLDLLN 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKH AI+LPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHLAIHLPKNK 336
>gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Beaucarnea hookeri]
Length = 339
Score = 654 bits (1688), Expect = 0.0
Identities = 325/336 (96%), Positives = 328/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID FIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDFFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPL CIFIDQ ELPPRTYNCLKRSNIHTLLDLL+
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLNCIFIDQSELPPRTYNCLKRSNIHTLLDLLN 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLMGIEYFRTED+KQILDTLQKH AINLPKNK
Sbjct: 301 NSQEDLMGIEYFRTEDVKQILDTLQKHLAINLPKNK 336
>gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behnia reticulata]
Length = 339
Score = 654 bits (1686), Expect = 0.0
Identities = 326/336 (97%), Positives = 329/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009335620.1| RNA polymerase alpha subunit (chloroplast) [Yucca brevifolia]
ref|YP_009335705.1| RNA polymerase alpha subunit (chloroplast) [Yucca filamentosa]
ref|YP_009335790.1| RNA polymerase alpha subunit (chloroplast) [Yucca queretaroensis]
ref|YP_009335875.1| RNA polymerase alpha subunit (chloroplast) [Yucca schidigera]
gb|APO12764.1| RNA polymerase alpha subunit (chloroplast) [Yucca brevifolia]
gb|APO12849.1| RNA polymerase alpha subunit (chloroplast) [Yucca filamentosa]
gb|APO12934.1| RNA polymerase alpha subunit (chloroplast) [Yucca queretaroensis]
gb|APO13019.1| RNA polymerase alpha subunit (chloroplast) [Yucca schidigera]
Length = 339
Score = 651 bits (1679), Expect = 0.0
Identities = 324/336 (96%), Positives = 328/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009335111.1| RNA polymerase alpha subunit (chloroplast) [Hesperoyucca whipplei]
gb|APO12169.1| RNA polymerase alpha subunit (chloroplast) [Hesperoyucca whipplei]
Length = 339
Score = 649 bits (1673), Expect = 0.0
Identities = 323/336 (96%), Positives = 328/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDI+FE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIYFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>gb|AEZ49448.1| RNA polymerase alpha subunit, partial (plastid) [Hosta ventricosa]
Length = 337
Score = 648 bits (1671), Expect = 0.0
Identities = 323/336 (96%), Positives = 327/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQD SYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDESYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009045598.1| RNA polymerase alpha subunit (chloroplast) [Cypripedium macranthos]
ref|YP_009335196.1| RNA polymerase alpha subunit (chloroplast) [Hosta ventricosa]
ref|YP_009432673.1| RNA polymerase alpha subunit (chloroplast) [Hosta minor]
gb|AEX94376.1| RNA polymerase alpha subunit (chloroplast) [Hosta ventricosa]
gb|AHI16781.1| RNA polymerase alpha subunit (chloroplast) (chloroplast) [Cypripedium
macranthos]
gb|APO12254.1| RNA polymerase alpha subunit (chloroplast) [Hosta ventricosa]
gb|ATB18931.1| RNA polymerase alpha subunit (chloroplast) [Hosta minor]
Length = 339
Score = 648 bits (1671), Expect = 0.0
Identities = 323/336 (96%), Positives = 327/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQD SYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDESYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009334607.1| RNA polymerase alpha subunit (chloroplast) [Beschorneria
septentrionalis]
gb|APO11500.1| RNA polymerase alpha subunit (chloroplast) [Beschorneria
septentrionalis]
Length = 339
Score = 647 bits (1669), Expect = 0.0
Identities = 322/336 (95%), Positives = 327/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRALQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRT+NCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTHNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009334860.1| RNA polymerase alpha subunit (chloroplast) [Hesperaloe campanulata]
gb|APO11918.1| RNA polymerase alpha subunit (chloroplast) [Hesperaloe campanulata]
Length = 339
Score = 647 bits (1668), Expect = 0.0
Identities = 323/336 (96%), Positives = 327/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLK IFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKYIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009327335.1| RNA polymerase alpha subunit (chloroplast) [Agave americana]
ref|YP_009334351.1| RNA polymerase alpha subunit (chloroplast) [Agave attenuata]
ref|YP_009335279.1| RNA polymerase alpha subunit (chloroplast) [Manfreda virginica]
gb|AEX94377.1| RNA polymerase alpha subunit (chloroplast) [Manfreda virginica]
gb|AEX94378.1| RNA polymerase alpha subunit (chloroplast) [Polianthes sp. Pires
2011-05]
gb|AOV94069.1| RNA polymerase alpha subunit (chloroplast) [Agave americana]
gb|APO11161.1| RNA polymerase alpha subunit (chloroplast) [Agave attenuata]
gb|APO12337.1| RNA polymerase alpha subunit (chloroplast) [Manfreda virginica]
gb|APO12594.1| RNA polymerase alpha subunit (chloroplast) [Polianthes sp. Pires
2011]
Length = 339
Score = 646 bits (1666), Expect = 0.0
Identities = 322/336 (95%), Positives = 327/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEE +IHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTLPLFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLPLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336
>ref|YP_009334776.1| RNA polymerase alpha subunit (chloroplast) [Chlorogalum pomeridianum]
gb|APO11669.1| RNA polymerase alpha subunit (chloroplast) [Chlorogalum pomeridianum]
Length = 339
Score = 645 bits (1665), Expect = 0.0
Identities = 322/336 (95%), Positives = 327/336 (97%)
Frame = +1
Query: 3691 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 3870
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 3871 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 4050
CITRAK E+VPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYVTAQD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 4051 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 4230
II PPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NP NNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPRNNSQDGSYPIDAVSMPVR 180
Query: 4231 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 4410
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 4411 ENKNRFTLPLFTFQNRLTNLKKNEKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 4590
ENKNRFTL LFTFQNRLTNLKKN+KGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS
Sbjct: 241 ENKNRFTLSLFTFQNRLTNLKKNKKGIPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLS 300
Query: 4591 NSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 4698
NSQEDLM IEYFRT+D+KQILDTLQKHFAINLPKNK
Sbjct: 301 NSQEDLMRIEYFRTKDVKQILDTLQKHFAINLPKNK 336