BLASTX nr result

ID: Ophiopogon24_contig00010375 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00010375
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274321.1| translocase of chloroplast 159, chloroplasti...    94   1e-19
ref|XP_020275781.1| translocase of chloroplast 159, chloroplasti...    88   1e-17
gb|ONK62964.1| uncharacterized protein A4U43_C07F9950 [Asparagus...    86   1e-16

>ref|XP_020274321.1| translocase of chloroplast 159, chloroplastic-like [Asparagus
           officinalis]
          Length = 1356

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 69/165 (41%), Positives = 76/165 (46%), Gaps = 33/165 (20%)
 Frame = +3

Query: 3   TVEEKPAFNSGRVSTDLEAKPGDGGGDFNPHLDVKPS----------------------- 113
           T EEK    S +VSTDLEAKP DGG D + H DV+PS                       
Sbjct: 386 TEEEKGVSTSDQVSTDLEAKPSDGGRDLDLHKDVEPSPAPVEDSKSKETEIQPLENSGIT 445

Query: 114 EGGTACEISV----------EKAEPNAEVSHVXXXXXXXXXXXXXXXXXXXXXVSDQQPR 263
           E GT+CEISV          EK EP     HV                     V+DQQPR
Sbjct: 446 ESGTSCEISVGSVLPVSVHGEKVEPENNGLHVDDDDENPIQNEAEEEEEDGD-VTDQQPR 504

Query: 264 VAILDSSETAKQIIKGMEKGXXXXXXXXXXXXXXXVDGQIVSDSD 398
           VAILDSSETAKQIIK ME G               ++GQIVSDSD
Sbjct: 505 VAILDSSETAKQIIKEMEGGSSATSFESSNSYRHEMEGQIVSDSD 549


>ref|XP_020275781.1| translocase of chloroplast 159, chloroplastic-like [Asparagus
           officinalis]
 gb|ONK62963.1| uncharacterized protein A4U43_C07F9940 [Asparagus officinalis]
          Length = 1343

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 65/166 (39%), Positives = 76/166 (45%), Gaps = 34/166 (20%)
 Frame = +3

Query: 3   TVEEKPAFNSGRVSTDLEAKPGDGGGDFNPHLDVKP-----------------------S 113
           T  EK  F S +V TDLEAKP DGGGD +   DV+P                       +
Sbjct: 374 TEVEKGVFTSHQVLTDLEAKPRDGGGDADLRQDVEPPPAPAEDSKSKETEIQSLENSSVT 433

Query: 114 EGGTACEISV-----------EKAEPNAEVSHVXXXXXXXXXXXXXXXXXXXXXVSDQQP 260
           E G+ACEIS            EK EP ++  HV                     VSD+QP
Sbjct: 434 ESGSACEISAGSTLPVYVVHGEKVEPESDGPHVADDDENLVQAGEEVEDDN---VSDEQP 490

Query: 261 RVAILDSSETAKQIIKGMEKGXXXXXXXXXXXXXXXVDGQIVSDSD 398
           RVAILDSSETAKQ+IK ME G               ++GQIVSDSD
Sbjct: 491 RVAILDSSETAKQLIKEMEGGSSSTSFDSYNSYRHQMEGQIVSDSD 536


>gb|ONK62964.1| uncharacterized protein A4U43_C07F9950 [Asparagus officinalis]
          Length = 1321

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 58/136 (42%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
 Frame = +3

Query: 3   TVEEKPAFNSGRVSTDLEAKPGDGGGDFNPHLDVKPS----EGGTACEISVEKAEPNAEV 170
           T EEK    S +VSTDLEAKP DGG D + H DV+PS    E   + E  ++  E + + 
Sbjct: 386 TEEEKGVSTSDQVSTDLEAKPSDGGRDLDLHKDVEPSPAPVEDSKSKETEIQPLENSDDD 445

Query: 171 SHVXXXXXXXXXXXXXXXXXXXXXVSDQQPRVAILDSSETAKQIIKGMEKGXXXXXXXXX 350
                                   V+DQQPRVAILDSSETAKQIIK ME G         
Sbjct: 446 DE-------NPIQNEAEEEEEDGDVTDQQPRVAILDSSETAKQIIKEMEGGSSATSFESS 498

Query: 351 XXXXXXVDGQIVSDSD 398
                 ++GQIVSDSD
Sbjct: 499 NSYRHEMEGQIVSDSD 514


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