BLASTX nr result
ID: Ophiopogon24_contig00010320
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00010320
(831 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OAE21677.1| hypothetical protein AXG93_4170s1180 [Marchantia ... 57 2e-19
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 75 3e-19
gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposo... 84 4e-18
gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposo... 77 6e-18
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 75 2e-17
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 74 8e-17
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 72 2e-16
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 72 2e-16
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 73 3e-16
ref|XP_012836332.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 74 5e-16
emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera] 68 5e-16
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ... 72 7e-16
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 77 9e-16
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen... 72 1e-15
ref|XP_020963654.1| uncharacterized protein LOC107607928 [Arachi... 67 1e-15
emb|CAN78199.1| hypothetical protein VITISV_041785 [Vitis vinifera] 81 1e-15
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 75 1e-15
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 70 2e-15
gb|AFB73912.1| polyprotein [Citrus sinensis] 69 3e-15
gb|KOM57411.1| hypothetical protein LR48_Vigan11g044400 [Vigna a... 73 3e-15
>gb|OAE21677.1| hypothetical protein AXG93_4170s1180 [Marchantia polymorpha subsp.
ruderalis]
Length = 306
Score = 57.4 bits (137), Expect(3) = 2e-19
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
+ L SDNGGEY ++F Y I L+ ++QN V E +N T+ ++VR++
Sbjct: 12 RYLRSDNGGEYISKEFGEYCKAEGITRHLTTIYTSQQNAVCERLNRTVLKKVRSMMSQSG 71
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ FW + + YL+ S P E+ K DY+ I I GC A
Sbjct: 72 LPYKFWAEAVNTAVYLINLSPSSAIDFSTPFELRHKRVADYNRIRIFGCTA 122
Score = 48.9 bits (115), Expect(3) = 2e-19
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 745 IAYALSSVSRYMSNPGKQHWEAVKWVLR 828
+A A+ +SRYMSNPGK WEAVKW+LR
Sbjct: 232 LAMAMGKISRYMSNPGKMQWEAVKWILR 259
Score = 38.5 bits (88), Expect(3) = 2e-19
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +3
Query: 453 NRNKLESKSKKCIFVGFTKGVIRFRL*D-PKMKGTFTNRDVF*RGQ-NITRHVRDREQDA 626
+R KL+ SKKC F+G+ GV ++L D + N + G+ + R +
Sbjct: 130 HRTKLDPTSKKCRFLGYASGVKSYKLWDLVAYRDDDGNALILEEGEPSSYREAQASTDKL 189
Query: 627 RWVTSSYPQDSVQSPQVEMS*VSCASAIGSLIYVMLCTR-HSLCIKFGK 770
W + + + + MS + A+GSL+Y+M+ TR +L + GK
Sbjct: 190 EWDAAMERETTRLGKRELMSKIPYDKAVGSLMYLMISTRPDNLAMAMGK 238
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 74.7 bits (182), Expect(2) = 3e-19
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L SDNG EYT +F+ + I+ S+ +QN V E MNM+LTER R L+L
Sbjct: 464 KYLRSDNGTEYTNSQFEKFCEQHGIQRHFSVRKTPQQNGVAERMNMSLTERARCLQLKAG 523
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
+S+GFW +T + YL+ RS ++ EE+ + +D + I GCP
Sbjct: 524 LSKGFWAETINMACYLINRSPRASLEGKVAEEVWTGKPIDLDNLRIFGCP 573
Score = 49.7 bits (117), Expect(2) = 3e-19
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 453 NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDVF*RGQNITRHVRDRE 617
+R+KL+ KSKKCIFVG++KGV F+L DP K +RDV Q + + R+ E
Sbjct: 582 DRSKLDPKSKKCIFVGYSKGVKGFKLWDPVSKKMVLSRDVVFDEQFMLKQSRETE 636
>gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 286
Score = 84.3 bits (207), Expect(2) = 4e-18
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
KVL +DNGGEYT ++F+ + I +IP +QN V E MN TL ER R +RL
Sbjct: 114 KVLRTDNGGEYTSKEFQDFCLKEGITRHFTIPNTPQQNGVAERMNRTLLERERCMRLFAG 173
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
+S+ FW ++ + T YLV RS L+ PEE+ + VDYS ++I CP
Sbjct: 174 LSKSFWAESVNTTYYLVNRSPSLALELKSPEEVWLGKPVDYSNLHIFSCP 223
Score = 36.2 bits (82), Expect(2) = 4e-18
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 414 ISSVARHSLFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
I S + L R KL+SKSK+CIF+G+ V +++ DP + + +D+
Sbjct: 219 IFSCPVYILLQDTERTKLDSKSKRCIFMGYASDVKWYKVWDPNTRKSELCKDI 271
>gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 864
Score = 77.0 bits (188), Expect(2) = 6e-18
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEY +FK + + I + ++PG +QN V E MN TLTER R++R+
Sbjct: 512 KKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMNRTLTERARSMRVQSG 571
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ + FW +T + +YL+ R +IPEE+ + V S + + GC A
Sbjct: 572 LPKQFWAETVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVA 622
Score = 42.7 bits (99), Expect(2) = 6e-18
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV-F*RGQNITRHVRDREQDARW 632
RNKL+ KSKKC F+G+ + +RL D + K +RDV F G +++
Sbjct: 631 RNKLDPKSKKCTFIGYGEDEFGYRLWDDENKKMIRSRDVIFNEGVMYKDKQNTSASNSKP 690
Query: 633 VTSSYPQ--DSVQSPQVEMS 686
+ +Y + D+++SP VE S
Sbjct: 691 IEPTYVEVDDALESPPVESS 710
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1269
Score = 75.5 bits (184), Expect(2) = 2e-17
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEY +FK + + I + ++PG +QN V E MN TLTER R++R+
Sbjct: 512 KKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMNRTLTERARSMRMQSG 571
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ + FW + + +YL+ R +IPEE+ + V S + + GC A
Sbjct: 572 LPKQFWAEAVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVA 622
Score = 42.7 bits (99), Expect(2) = 2e-17
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV-F*RGQNITRHVRDREQDARW 632
RNKL+ KSKKC F+G+ + +RL D + K +RDV F G +++
Sbjct: 631 RNKLDPKSKKCTFIGYGEDEFGYRLWDDENKKMIRSRDVIFNEGVMYKDKQNTSASNSKP 690
Query: 633 VTSSYPQ--DSVQSPQVEMS 686
+ +Y + D+++SP VE S
Sbjct: 691 IEPTYVEVDDALESPPVESS 710
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1
Query: 724 MSCYVLGIAYALSSVSRYMSNPGKQHWEAVKWVLRY 831
M C I YA+ VSR+MSNPGK HWEAVKW+LRY
Sbjct: 1064 MVCTRPDIGYAVGVVSRFMSNPGKAHWEAVKWILRY 1099
Score = 32.3 bits (72), Expect(2) = 2e-08
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Frame = +3
Query: 423 VARHSLFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDVF*RGQNITR- 599
VA ++ + N K SK +G K ++ ++ K KGT + + R
Sbjct: 956 VAGSNMIEIRNLKKQLSKEFDMKDLGPAKKILGMQITRDKQKGTLQLSQAEYINRVLQRF 1015
Query: 600 HVRDREQDARWVTSSYPQDSVQSPQVE-----MS*VSCASAIGSLIYVMLCTR 743
++ + + + + S + + QSP+ E M+ ASAIGSL+Y M+CTR
Sbjct: 1016 NMSNAKPVSTPLASHFRLSTDQSPKTEEEKELMAKTPYASAIGSLMYAMVCTR 1068
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 73.6 bits (179), Expect(2) = 8e-17
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEY +F A+ I Q ++ +QN V E MN TL ER R + +
Sbjct: 545 KCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAE 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
M++ FW + Y++ RS L+ P EM + + VDYS++++ GCP
Sbjct: 605 MAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCP 654
Score = 42.4 bits (98), Expect(2) = 8e-17
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S R KL+ KS+KCIF+G+ V +RL DP + +RDV
Sbjct: 658 MYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV 702
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 72.4 bits (176), Expect(2) = 2e-16
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEY +F A+ I Q ++ +QN V E MN TL ER R +
Sbjct: 545 KCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAG 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
M++ FW + Y++ RS L+ P EM + + VDYS++++ GCP
Sbjct: 605 MAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCP 654
Score = 42.4 bits (98), Expect(2) = 2e-16
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S R KL+ KS+KCIF+G+ V +RL DP + +RDV
Sbjct: 658 MYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV 702
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 72.0 bits (175), Expect(2) = 2e-16
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEY +F A+ I Q ++ +QN V E MN TL ER R +
Sbjct: 545 KCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAG 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
M++ FW + Y++ RS L+ P EM + + VDYS++++ GCP
Sbjct: 605 MAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCP 654
Score = 42.4 bits (98), Expect(2) = 2e-16
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S R KL+ KS+KCIF+G+ V +RL DP + +RDV
Sbjct: 658 MYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV 702
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 72.8 bits (177), Expect(2) = 3e-16
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEY +F A+ I Q ++ +QN V E MN TL ER R +
Sbjct: 545 KCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAG 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
M++ FW + Y++ RS L+ P EM + + VDYS++++ GCP
Sbjct: 605 MAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCP 654
Score = 41.2 bits (95), Expect(2) = 3e-16
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S + KL+ KS+KCIF+G+ V +RL DP + +RDV
Sbjct: 658 MYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV 702
>ref|XP_012836332.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Erythranthe guttata]
Length = 755
Score = 74.3 bits (181), Expect(2) = 5e-16
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Frame = +2
Query: 134 NGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*EDMSEGFW 313
NGGEY FK + + I + S+PG ++QN V E MN TLTER R++R+ + + FW
Sbjct: 420 NGGEYEDNSFKRFCHEHGIRMERSVPGTSQQNAVAERMNRTLTERARSMRMQSGLPKSFW 479
Query: 314 MKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ + +YL+ R QIPEE+ + V S + GC A
Sbjct: 480 GEAVNTAAYLINRGPSVPLEYQIPEEVWSGKDVKLSHFKVFGCTA 524
Score = 38.9 bits (89), Expect(2) = 5e-16
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
RNKL+ KSKKC FVG+ + +R+ D + K +RDV
Sbjct: 533 RNKLDPKSKKCTFVGYGEDQFGYRIWDDESKKIIRSRDV 571
>emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]
Length = 605
Score = 67.8 bits (164), Expect(2) = 5e-16
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L SDNG EYT KF I+ + +QN V E MN+T+ ER + L+L
Sbjct: 54 KCLRSDNGTEYTDSKFTELCEQHGIKRHFIVRKTPQQNNVAEMMNITIAERTQCLKLNVG 113
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
+ FW++ + YL+ RS H ++ +E+ VDYS++ + GCP
Sbjct: 114 LENKFWVEAVNMACYLINRSPRATLHGKVVDEVWIGSPVDYSSLRLFGCP 163
Score = 45.4 bits (106), Expect(2) = 5e-16
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +3
Query: 453 NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDVF*RGQNITRHVRDREQDARW 632
+R+KL+ KS++CIF+G+ KGV F++ DPK +RDV V D + +W
Sbjct: 172 DRSKLDEKSRQCIFLGYQKGVKGFKIWDPKANKVVISRDV----------VFDEKTMLQW 221
Query: 633 VTSSYPQ 653
+SS Q
Sbjct: 222 KSSSEDQ 228
>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
Length = 473
Score = 71.6 bits (174), Expect(2) = 7e-16
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEYT F A+ I+ Q ++ +QN V E MN TL ER R +
Sbjct: 157 KCLRTDNGGEYTDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTTG 216
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
+++ FW + YL+ RS ++ P EM + + DYS++++ GCP
Sbjct: 217 LAKSFWAEAVKTACYLINRSPSTAIGVKTPMEMWKGKPADYSSLHVFGCP 266
Score = 41.2 bits (95), Expect(2) = 7e-16
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S R KL+ KS+KCIF+G+ V +RL DP +RDV
Sbjct: 270 MYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTAHKIIVSRDV 314
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
Length = 1328
Score = 77.0 bits (188), Expect(2) = 9e-16
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L SDNGGEYT R+F+ Y + I ++ ++PG + N V E MN T+ E+VR++
Sbjct: 545 KRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAK 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ + FW + YL+ RS +IPE + + V YS + + GC A
Sbjct: 605 LPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 655
Score = 35.4 bits (80), Expect(2) = 9e-16
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDVF*RGQNI 593
R KL+ KS CIF+G+ +RL DP K +RDV R +
Sbjct: 664 RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEV 709
>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1340
Score = 71.6 bits (174), Expect(2) = 1e-15
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K + SDNGGEYT +F+ Y + I++ +IPG + N V E MN T+ E+VR++ +
Sbjct: 546 KCIRSDNGGEYTSNEFRDYCSKHGIKHVKTIPGTPQHNGVAERMNRTILEKVRSMLKTAN 605
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+++ FW + + YL+ R+ L+ PE + S YS + + GC A
Sbjct: 606 LTKKFWGEAMTTACYLINRTPCVPLGLETPEGVWTGRSASYSHLRVFGCKA 656
Score = 40.4 bits (93), Expect(2) = 1e-15
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRD-VF*RGQNITRHVRDREQDARW 632
R+KL+ K+ CIF+G+ + +RL +PK K F +RD VF GQ I ++ + A
Sbjct: 665 RSKLDDKAMPCIFLGYGNEEMGYRLWNPKTKKLFRSRDVVFHEGQTIADFDKNEVEHADQ 724
Query: 633 VT 638
+T
Sbjct: 725 LT 726
>ref|XP_020963654.1| uncharacterized protein LOC107607928 [Arachis ipaensis]
Length = 1235
Score = 67.4 bits (163), Expect(2) = 1e-15
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Frame = +2
Query: 74 SKTRVKTCNKICGTKVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNM 253
+K V++ KI K L +DNGGEY F + A I+ Q ++ +QN V E MN
Sbjct: 234 AKLEVESGKKI---KCLRTDNGGEYVDSDFITFCKQAGIQRQFTVAYTPQQNGVAERMNR 290
Query: 254 TLTERVRNLRL*EDMSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINI 418
TL ER R + +++ FW + Y++ RS L+ P EM + + +YS+++I
Sbjct: 291 TLLERARAMLQTAGLAKFFWAEAVKTACYVINRSPSTAIGLKTPMEMWQGKPPNYSSLHI 350
Query: 419 IGCP 430
GCP
Sbjct: 351 FGCP 354
Score = 44.7 bits (104), Expect(2) = 1e-15
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S R KL+ KS+KCIF+G+ GV +RL DP + +RDV
Sbjct: 358 MYNSQERTKLDPKSRKCIFLGYADGVKGYRLWDPTARKVVVSRDV 402
>emb|CAN78199.1| hypothetical protein VITISV_041785 [Vitis vinifera]
Length = 892
Score = 81.3 bits (199), Expect(2) = 1e-15
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L SDNGGEY R+F Y I + +IPG +QN V E MN TL ER R++RL
Sbjct: 359 KCLRSDNGGEYIDRRFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHVG 418
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGC 427
+ + FW S T+YL+ R ++PEE+ ++V +S + + GC
Sbjct: 419 LPKTFWADAVSTTAYLINRGPSVPMEFRLPEEVWSDKNVKFSHLKVFGC 467
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 444 DS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
DS R+KL++KSK C F+G+ +R D + + +R+V
Sbjct: 474 DSNARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNV 516
Score = 57.8 bits (138), Expect(2) = 8e-09
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 724 MSCYVLGIAYALSSVSRYMSNPGKQHWEAVKWVLRY 831
M C L IA+A+ VSR+MS PGKQHWEAVKW+LRY
Sbjct: 726 MVCTRLDIAHAVGVVSRFMSRPGKQHWEAVKWILRY 761
Score = 31.2 bits (69), Expect(2) = 8e-09
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +3
Query: 639 SSYPQDSVQSPQVE-----MS*VSCASAIGSLIYVMLCTR 743
S + QSP+ E ++ V ASAIGSL+Y M+CTR
Sbjct: 691 SHFKLSKEQSPKTEEERDHINKVPYASAIGSLMYAMVCTR 730
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 75.1 bits (183), Expect(2) = 1e-15
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L SDNGGEY +KF D I ++ +QN V E MN TL E+ R++R
Sbjct: 517 KCLRSDNGGEYRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMRFHAG 576
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ E FW + +H YL+ RS + + EE+ + VDYS + + GC A
Sbjct: 577 LPEEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPVDYSNLRVFGCSA 627
Score = 36.6 bits (83), Expect(2) = 1e-15
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
R KLE KS +C+F+GF KGV ++L D + +RDV
Sbjct: 636 RTKLEPKSLECLFIGFEKGVKGYKLWDIVNEKKVISRDV 674
Score = 53.5 bits (127), Expect(2) = 8e-07
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 724 MSCYVLGIAYALSSVSRYMSNPGKQHWEAVKWVLRY 831
M C +A A+S VS+YMSNPGK+HWEAVKW+ +Y
Sbjct: 1094 MICTRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKY 1129
Score = 28.5 bits (62), Expect(2) = 8e-07
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 681 MS*VSCASAIGSLIYVMLCTRHSL 752
M V ASA+G L+Y M+CTR L
Sbjct: 1078 MKNVPYASAVGCLMYAMICTRPDL 1101
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 69.7 bits (169), Expect(2) = 2e-15
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEYT F A+ I Q ++ +QN V E MN TL ER R +
Sbjct: 545 KCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAG 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
+++ FW + Y++ RS L+ P EM + + DYS++ + GCP
Sbjct: 605 LAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCP 654
Score = 41.6 bits (96), Expect(2) = 2e-15
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
+++S R KL+ KS++C F+G+ V +RL DP + F +RDV
Sbjct: 658 MYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDV 702
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 69.3 bits (168), Expect(2) = 3e-15
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L +DNGGEYT +F A+ I+ Q ++ +QN V E MN TLTER+R +
Sbjct: 545 KCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAG 604
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCP 430
+ FW + Y+V RS L+ EM + DYS ++ GCP
Sbjct: 605 LPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCP 654
Score = 41.6 bits (96), Expect(2) = 3e-15
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 438 LFDS*NRNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDV 572
++++ R KL+ KS+KCIF+G+ GV +RL DP +RDV
Sbjct: 658 MYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDV 702
>gb|KOM57411.1| hypothetical protein LR48_Vigan11g044400 [Vigna angularis]
Length = 179
Score = 72.8 bits (177), Expect(2) = 3e-15
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +2
Query: 116 KVLTSDNGGEYTFRKFKAYLTDANIEYQLSIPGQTEQNEVVECMNMTLTERVRNLRL*ED 295
K L SDNGGEY +FK + + I + ++P + N V E MN TLTER +++R+
Sbjct: 11 KKLRSDNGGEYVDTRFKKFCYEHGIRMERTVPSTPQHNGVAERMNRTLTERAKSMRVQSG 70
Query: 296 MSEGFWMKTESHTSYLVIRS-----HLQIPEEM*RKESVDYSTINIIGCPA 433
+ + FW + + +YL+ RS +IPEE+ + V S + + GC A
Sbjct: 71 LPKQFWAEAVNTAAYLINRSPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVA 121
Score = 38.1 bits (87), Expect(2) = 3e-15
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 456 RNKLESKSKKCIFVGFTKGVIRFRL*DPKMKGTFTNRDVF*RGQNITRH 602
RNKL+ KSKKC F+G+ + +R+ D + K +RDV +++ H
Sbjct: 130 RNKLDPKSKKCTFLGYGEDEFGYRIWDDENKKMTRSRDVIFNEKDVQGH 178