BLASTX nr result

ID: Ophiopogon24_contig00010239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00010239
         (802 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK59415.1| uncharacterized protein A4U43_C08F6200 [Asparagus...   154   2e-39
ref|XP_020277121.1| pentatricopeptide repeat-containing protein ...   154   8e-39

>gb|ONK59415.1| uncharacterized protein A4U43_C08F6200 [Asparagus officinalis]
          Length = 601

 Score =  154 bits (389), Expect = 2e-39
 Identities = 88/142 (61%), Positives = 102/142 (71%)
 Frame = -1

Query: 736 KLEEEKENCYSYSAVKNIFPMPSYQMYGTPLFVHEAQTGLKLDLLAGDSMLDVHKNDMPF 557
           KLEEEKEN  SYS V+NI P              EAQ GLKL+LL G+SMLDV K  M F
Sbjct: 472 KLEEEKENFCSYSDVENILPTV------------EAQRGLKLELLDGNSMLDVDKKCMSF 519

Query: 556 ESSPNMLGEILSREVGWVYSLSKHAPVKFEVMQVEGIIPEHVILLLIFSDVSNIGLVDER 377
           E S +MLGE+L+REVG +YSLS +A VKFEVMQVEGIIPEHVILLL+FSDVS  GL DE 
Sbjct: 520 EVSQDMLGEMLAREVGRLYSLSTYASVKFEVMQVEGIIPEHVILLLVFSDVSRFGLFDET 579

Query: 376 FNSVSSLHRSEIDNSHRLSAWA 311
           F+S+S+L RS   ++ R SA A
Sbjct: 580 FSSISALRRSGFSSNQRASALA 601


>ref|XP_020277121.1| pentatricopeptide repeat-containing protein At4g18520-like [Asparagus
            officinalis]
 ref|XP_020277122.1| pentatricopeptide repeat-containing protein At4g18520-like [Asparagus
            officinalis]
 ref|XP_020277123.1| pentatricopeptide repeat-containing protein At4g18520-like [Asparagus
            officinalis]
 ref|XP_020277125.1| pentatricopeptide repeat-containing protein At4g18520-like [Asparagus
            officinalis]
          Length = 884

 Score =  154 bits (389), Expect = 8e-39
 Identities = 88/142 (61%), Positives = 102/142 (71%)
 Frame = -1

Query: 736  KLEEEKENCYSYSAVKNIFPMPSYQMYGTPLFVHEAQTGLKLDLLAGDSMLDVHKNDMPF 557
            KLEEEKEN  SYS V+NI P              EAQ GLKL+LL G+SMLDV K  M F
Sbjct: 755  KLEEEKENFCSYSDVENILPTV------------EAQRGLKLELLDGNSMLDVDKKCMSF 802

Query: 556  ESSPNMLGEILSREVGWVYSLSKHAPVKFEVMQVEGIIPEHVILLLIFSDVSNIGLVDER 377
            E S +MLGE+L+REVG +YSLS +A VKFEVMQVEGIIPEHVILLL+FSDVS  GL DE 
Sbjct: 803  EVSQDMLGEMLAREVGRLYSLSTYASVKFEVMQVEGIIPEHVILLLVFSDVSRFGLFDET 862

Query: 376  FNSVSSLHRSEIDNSHRLSAWA 311
            F+S+S+L RS   ++ R SA A
Sbjct: 863  FSSISALRRSGFSSNQRASALA 884


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