BLASTX nr result
ID: Ophiopogon24_contig00010132
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00010132
(465 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009397707.1| PREDICTED: small nuclear ribonucleoprotein-a... 151 2e-42
ref|XP_019703020.1| PREDICTED: small nuclear ribonucleoprotein-a... 149 5e-42
ref|XP_010911547.1| PREDICTED: LOW QUALITY PROTEIN: small nuclea... 148 8e-42
ref|XP_010449168.1| PREDICTED: small nuclear ribonucleoprotein-a... 145 2e-40
ref|XP_010439573.1| PREDICTED: small nuclear ribonucleoprotein-a... 145 2e-40
ref|XP_010039315.1| PREDICTED: small nuclear ribonucleoprotein-a... 145 3e-40
ref|XP_020093243.1| small nuclear ribonucleoprotein-associated p... 144 5e-40
ref|XP_006377905.1| small nuclear ribonucleoprotein associated p... 144 5e-40
ref|XP_023882679.1| small nuclear ribonucleoprotein-associated p... 144 5e-40
ref|XP_016165879.1| small nuclear ribonucleoprotein-associated p... 145 6e-40
ref|XP_010275183.1| PREDICTED: small nuclear ribonucleoprotein-a... 144 7e-40
ref|XP_019578846.1| PREDICTED: small nuclear ribonucleoprotein-a... 144 7e-40
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot... 144 8e-40
gb|EFH44139.1| hypothetical protein ARALYDRAFT_492815 [Arabidops... 144 8e-40
ref|XP_020875107.1| small nuclear ribonucleoprotein-associated p... 144 9e-40
ref|XP_006413865.1| small nuclear ribonucleoprotein-associated p... 144 1e-39
ref|XP_021989235.1| small nuclear ribonucleoprotein-associated p... 144 1e-39
gb|OTG18031.1| putative LSM domain, Small ribonucleoprotein asso... 144 1e-39
ref|XP_006377906.1| hypothetical protein POPTR_0011s15920g [Popu... 144 1e-39
gb|ABK93409.1| unknown [Populus trichocarpa] 144 1e-39
>ref|XP_009397707.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B-like [Musa acuminata subsp. malaccensis]
Length = 268
Score = 151 bits (381), Expect = 2e-42
Identities = 84/138 (60%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSKGSKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFR+LPP
Sbjct: 1 MSMSKGSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPV-KGAAA 59
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH-XXXXXXXXXXXXXX 409
GEERED SMTVEGPPPPD+SRAKAH
Sbjct: 60 AAGKKPGEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKAHAAAALAGPGVGRAAG 119
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 120 RGIPTAPLVQAQPGLAGP 137
>ref|XP_019703020.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B-like [Elaeis guineensis]
Length = 262
Score = 149 bits (377), Expect = 5e-42
Identities = 83/139 (59%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSKGSKMLQY+NYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKGSKMLQYVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH--XXXXXXXXXXXXX 406
GEERED SMTVEGPPPPD+SRAKA
Sbjct: 55 ---KKGGEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKAQAAAAALAGPGLGRAA 111
Query: 407 XXXXXXXXLVQAQPGLSGP 463
L+QAQPGL+GP
Sbjct: 112 GRGVPTAPLIQAQPGLAGP 130
>ref|XP_010911547.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear
ribonucleoprotein-associated protein B'-like, partial
[Elaeis guineensis]
Length = 228
Score = 148 bits (373), Expect = 8e-42
Identities = 84/139 (60%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSKGSKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKGSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH--XXXXXXXXXXXXX 406
GEERED SMTV GPPPPD+SRAKA
Sbjct: 55 ---KKGGEEREDRRTLGLVLLRGEEVVSMTVXGPPPPDESRAKAQSAAAALAGPGLGRAA 111
Query: 407 XXXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 112 GRGVPTAPLVQAQPGLAGP 130
>ref|XP_010449168.1| PREDICTED: small nuclear ribonucleoprotein-associated proteins B
and B'-like [Camelina sativa]
Length = 261
Score = 145 bits (366), Expect = 2e-40
Identities = 83/138 (60%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPPD+SRAKA
Sbjct: 55 -KGKKNNEEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGPLVQAQPGLSGP 131
>ref|XP_010439573.1| PREDICTED: small nuclear ribonucleoprotein-associated proteins B
and B' [Camelina sativa]
Length = 261
Score = 145 bits (366), Expect = 2e-40
Identities = 83/138 (60%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPPD+SRAKA
Sbjct: 55 -KGKKINEEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGPLVQAQPGLSGP 131
>ref|XP_010039315.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
[Eucalyptus grandis]
gb|KCW46028.1| hypothetical protein EUGRSUZ_L00005 [Eucalyptus grandis]
Length = 291
Score = 145 bits (367), Expect = 3e-40
Identities = 81/138 (58%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKPP 60
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAK-AHXXXXXXXXXXXXXX 409
+RED SMTVEGPPPPD+SRAK A
Sbjct: 61 AAAPGAPADREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKSASAAASAGPGMGRAAG 120
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 121 RGVPTAPLVQAQPGLAGP 138
>ref|XP_020093243.1| small nuclear ribonucleoprotein-associated protein B'-like [Ananas
comosus]
ref|XP_020093244.1| small nuclear ribonucleoprotein-associated protein B'-like [Ananas
comosus]
Length = 263
Score = 144 bits (364), Expect = 5e-40
Identities = 82/137 (59%), Positives = 87/137 (63%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSKGSKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFR+LPP
Sbjct: 1 MSMSKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPV------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAHXXXXXXXXXXXXXXX 412
GEERE+ SMTVEGPPPPDDSRAK
Sbjct: 55 KGAKKAGEEREERRTLGLVLLRGEEVVSMTVEGPPPPDDSRAK--------------XGR 100
Query: 413 XXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 101 GVPAAPLVQAQPGLAGP 117
>ref|XP_006377905.1| small nuclear ribonucleoprotein associated protein B [Populus
trichocarpa]
Length = 250
Score = 144 bits (363), Expect = 5e-40
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKNNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 114 RGIPTAPLVQAQPGLAGP 131
>ref|XP_023882679.1| small nuclear ribonucleoprotein-associated protein B'-like [Quercus
suber]
ref|XP_023882687.1| small nuclear ribonucleoprotein-associated protein B'-like [Quercus
suber]
gb|POF22767.1| small nuclear ribonucleoprotein-associated protein b [Quercus
suber]
Length = 265
Score = 144 bits (364), Expect = 5e-40
Identities = 81/138 (58%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA-----K 55
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAK-AHXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAK A+
Sbjct: 56 GKRTNNNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAANAAAMAGPGIGRAAG 115
Query: 410 XXXXXXXLVQAQPGLSGP 463
L+QAQPGL+GP
Sbjct: 116 RGIPTAPLIQAQPGLAGP 133
>ref|XP_016165879.1| small nuclear ribonucleoprotein-associated proteins B and B'
[Arachis ipaensis]
ref|XP_020962665.1| small nuclear ribonucleoprotein-associated proteins B and B'
[Arachis ipaensis]
Length = 283
Score = 145 bits (365), Expect = 6e-40
Identities = 81/138 (58%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA-----K 55
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
GE+RED SMTVEGPPPP++SRAKA +
Sbjct: 56 GKKTAPGEDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVNAAAMGGPGIGRAAG 115
Query: 410 XXXXXXXLVQAQPGLSGP 463
+VQAQPGL+GP
Sbjct: 116 RGIPAAPVVQAQPGLAGP 133
>ref|XP_010275183.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Nelumbo nucifera]
Length = 276
Score = 144 bits (364), Expect = 7e-40
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH-XXXXXXXXXXXXXX 409
EERED SMTVEGPPPPD++RAKA
Sbjct: 55 --KGKKNEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDENRAKASGAAAMAGPGIGRAAG 112
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 113 RGIPTAPLVQAQPGLAGP 130
>ref|XP_019578846.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like, partial [Rhinolophus sinicus]
Length = 252
Score = 144 bits (362), Expect = 7e-40
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKINEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGSLVQAQPGLSGP 131
>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
ref|NP_001154258.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
ref|NP_001329619.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
emb|CAB45810.1| putative snRNP protein [Arabidopsis thaliana]
emb|CAB79044.1| putative snRNP protein [Arabidopsis thaliana]
gb|AAO42236.1| putative snRNP protein [Arabidopsis thaliana]
gb|AAO50590.1| putative snRNP protein [Arabidopsis thaliana]
dbj|BAH19715.1| AT4G20440 [Arabidopsis thaliana]
gb|AEE84330.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gb|AEE84331.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gb|AEE84332.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gb|AEE84333.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gb|OAP00808.1| smB [Arabidopsis thaliana]
gb|ANM67817.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
Length = 257
Score = 144 bits (362), Expect = 8e-40
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKINEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGPLVQAQPGLSGP 131
>gb|EFH44139.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 144 bits (362), Expect = 8e-40
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKINEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGPLVQAQPGLSGP 131
>ref|XP_020875107.1| small nuclear ribonucleoprotein-associated protein B' [Arabidopsis
lyrata subsp. lyrata]
ref|XP_020875108.1| small nuclear ribonucleoprotein-associated protein B' [Arabidopsis
lyrata subsp. lyrata]
Length = 262
Score = 144 bits (362), Expect = 9e-40
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKINEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGPLVQAQPGLSGP 131
>ref|XP_006413865.1| small nuclear ribonucleoprotein-associated protein B' [Eutrema
salsugineum]
ref|XP_024005220.1| small nuclear ribonucleoprotein-associated protein B' [Eutrema
salsugineum]
ref|XP_024005221.1| small nuclear ribonucleoprotein-associated protein B' [Eutrema
salsugineum]
ref|XP_024005222.1| small nuclear ribonucleoprotein-associated protein B' [Eutrema
salsugineum]
gb|ESQ55318.1| hypothetical protein EUTSA_v10026002mg [Eutrema salsugineum]
Length = 263
Score = 144 bits (362), Expect = 1e-39
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQ+INYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKINEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGLSGP
Sbjct: 114 RGVPTGPLVQAQPGLSGP 131
>ref|XP_021989235.1| small nuclear ribonucleoprotein-associated protein B'-like
[Helianthus annuus]
ref|XP_021989236.1| small nuclear ribonucleoprotein-associated protein B'-like
[Helianthus annuus]
ref|XP_021989237.1| small nuclear ribonucleoprotein-associated protein B'-like
[Helianthus annuus]
gb|OTG11941.1| putative LSM domain, Small ribonucleoprotein associated, SmB/SmN
[Helianthus annuus]
Length = 270
Score = 144 bits (362), Expect = 1e-39
Identities = 80/138 (57%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSKGSKMLQ+INYRMR+TIQDGRQLVG+FMAFDRHMNLV+GDCEEFRKLPPA
Sbjct: 1 MSMSKGSKMLQFINYRMRITIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPPD++RAKA
Sbjct: 55 -KGSKNSEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 114 RGIPTAPLVQAQPGLAGP 131
>gb|OTG18031.1| putative LSM domain, Small ribonucleoprotein associated, SmB/SmN
[Helianthus annuus]
Length = 270
Score = 144 bits (362), Expect = 1e-39
Identities = 80/138 (57%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSKGSKMLQ+INYRMR+TIQDGRQLVG+FMAFDRHMNLV+GDCEEFRKLPPA
Sbjct: 1 MSMSKGSKMLQFINYRMRITIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPPD++RAKA
Sbjct: 55 -KGSKNSEEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 114 RGIPTAPLVQAQPGLAGP 131
>ref|XP_006377906.1| hypothetical protein POPTR_0011s15920g [Populus trichocarpa]
ref|XP_006377907.1| hypothetical protein POPTR_0011s15920g [Populus trichocarpa]
gb|PNT13679.1| hypothetical protein POPTR_011G155700v3 [Populus trichocarpa]
Length = 286
Score = 144 bits (363), Expect = 1e-39
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKNNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 114 RGIPTAPLVQAQPGLAGP 131
>gb|ABK93409.1| unknown [Populus trichocarpa]
Length = 286
Score = 144 bits (363), Expect = 1e-39
Identities = 82/138 (59%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 53 MSMSKGSKMLQYINYRMRVTIQDGRQLVGRFMAFDRHMNLVLGDCEEFRKLPPAXXXXXX 232
MSMSK SKMLQYINYRMRVTIQDGRQLVG+FMAFDRHMNLVLGDCEEFRKLPPA
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA------ 54
Query: 233 XXXXXXGEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXX 409
EERED SMTVEGPPPP++SRAKA
Sbjct: 55 -KGKKNNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAG 113
Query: 410 XXXXXXXLVQAQPGLSGP 463
LVQAQPGL+GP
Sbjct: 114 RGIPTAPLVQAQPGLAGP 131