BLASTX nr result

ID: Ophiopogon24_contig00009885 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00009885
         (588 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020262098.1| F-box protein SKP2A-like isoform X1 [Asparag...    59   6e-07

>ref|XP_020262098.1| F-box protein SKP2A-like isoform X1 [Asparagus officinalis]
 gb|ONK73271.1| uncharacterized protein A4U43_C04F29200 [Asparagus officinalis]
          Length = 372

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +2

Query: 497 MVGGRPVTGNLDFWFRNLMVADGRGQMDGV 586
           MVGGRPVTGNLDFWFRNLMVADG  +M+GV
Sbjct: 1   MVGGRPVTGNLDFWFRNLMVADGAEKMEGV 30


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