BLASTX nr result

ID: Ophiopogon24_contig00009666 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00009666
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagu...    59   2e-11
ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing ...    59   2e-11

>gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagus officinalis]
          Length = 601

 Score = 58.5 bits (140), Expect(2) = 2e-11
 Identities = 37/87 (42%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = -1

Query: 330 GGLKPSSFLPSLQAKKWFPCSEFVARPSKSVKDMEVTVSVSVDXXXXXXXXXXXXXXXXX 151
           GGLKPS FLP LQ  KWFPCSEFV  P  S    E   +V VD                 
Sbjct: 236 GGLKPSYFLPFLQPNKWFPCSEFV--PGSSRGGFEDKEAVGVDKSGAKGSKSSMEASVEA 293

Query: 150 XXAL-NLNGLERKDGNLGCWFSRLVNS 73
                 +  L+RK+ NL  WFSR +NS
Sbjct: 294 VTVKEGVKELQRKNRNLSSWFSRWMNS 320



 Score = 37.7 bits (86), Expect(2) = 2e-11
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -2

Query: 71  EDAKFLFAAVTVPLLYSSFLAAP 3
           +DAKF FAAVTVPLLY S LA P
Sbjct: 323 DDAKFCFAAVTVPLLYKSRLAEP 345


>ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing peptidase 1,
           chloroplastic-like [Asparagus officinalis]
          Length = 408

 Score = 58.5 bits (140), Expect(2) = 2e-11
 Identities = 37/87 (42%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = -1

Query: 330 GGLKPSSFLPSLQAKKWFPCSEFVARPSKSVKDMEVTVSVSVDXXXXXXXXXXXXXXXXX 151
           GGLKPS FLP LQ  KWFPCSEFV  P  S    E   +V VD                 
Sbjct: 140 GGLKPSYFLPFLQPNKWFPCSEFV--PGSSRGGFEDKEAVGVDKSGAKGSKSSMEASVEA 197

Query: 150 XXAL-NLNGLERKDGNLGCWFSRLVNS 73
                 +  L+RK+ NL  WFSR +NS
Sbjct: 198 VTVKEGVKELQRKNRNLSSWFSRWMNS 224



 Score = 37.7 bits (86), Expect(2) = 2e-11
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -2

Query: 71  EDAKFLFAAVTVPLLYSSFLAAP 3
           +DAKF FAAVTVPLLY S LA P
Sbjct: 227 DDAKFCFAAVTVPLLYKSRLAEP 249


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