BLASTX nr result
ID: Ophiopogon24_contig00009651
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00009651
(388 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK67226.1| uncharacterized protein A4U43_C06F17950 [Asparagu... 91 1e-20
ref|XP_020271090.1| 30S ribosomal protein 3-1, chloroplastic-lik... 59 1e-07
ref|XP_020584649.1| 30S ribosomal protein 3, chloroplastic [Phal... 57 2e-07
ref|XP_019249277.1| PREDICTED: 30S ribosomal protein 3, chloropl... 56 6e-07
ref|XP_015962940.1| 30S ribosomal protein 3, chloroplastic isofo... 56 6e-07
gb|KVI02804.1| Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculu... 55 1e-06
ref|XP_023762728.1| 30S ribosomal protein 3, chloroplastic-like ... 55 1e-06
ref|XP_016471783.1| PREDICTED: 30S ribosomal protein 3, chloropl... 55 1e-06
ref|XP_009763742.1| PREDICTED: 30S ribosomal protein 3, chloropl... 55 1e-06
ref|XP_009615234.1| PREDICTED: 30S ribosomal protein 3, chloropl... 55 1e-06
ref|XP_020107544.1| 30S ribosomal protein 3-1, chloroplastic-lik... 55 1e-06
gb|PON93482.1| Ribosomal protein PSRP-3/Ycf [Trema orientalis] 55 1e-06
gb|PON78210.1| Ribosomal protein PSRP-3/Ycf [Parasponia andersonii] 55 1e-06
ref|XP_010905855.1| PREDICTED: 30S ribosomal protein 3, chloropl... 55 1e-06
gb|OMP06800.1| Ribosomal protein PSRP-3/Ycf65 [Corchorus olitorius] 55 2e-06
ref|XP_017250144.1| PREDICTED: 30S ribosomal protein 3, chloropl... 55 2e-06
gb|OMO90244.1| Ribosomal protein PSRP-3/Ycf65 [Corchorus capsula... 55 2e-06
ref|XP_018815481.1| PREDICTED: 30S ribosomal protein 3, chloropl... 55 2e-06
gb|APR63819.1| hypothetical protein [Populus tomentosa] 55 2e-06
ref|XP_011021896.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 55 2e-06
>gb|ONK67226.1| uncharacterized protein A4U43_C06F17950 [Asparagus officinalis]
Length = 165
Score = 91.3 bits (225), Expect = 1e-20
Identities = 53/106 (50%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Frame = -3
Query: 305 MASISLNATHFCSLTSQFQSNPRN----PPTNVSPISPLSPNPTL-FSSTXXXXXXXXXX 141
MASIS+N T+ CSL +QFQ P+ N++P+SP SP PTL S+
Sbjct: 1 MASISMNGTYLCSLAAQFQRKPQKFLSRSNHNLTPVSPFSPKPTLSLSNPHLPFKQLNKQ 60
Query: 140 XXSXXXXXXXXXXXXEMVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
S +VVKGL KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 61 HHSPPPPPPPPERELGVVVKGLEKPRLVLKFIWMEKNIGLALDQVI 106
>ref|XP_020271090.1| 30S ribosomal protein 3-1, chloroplastic-like [Asparagus
officinalis]
Length = 263
Score = 58.9 bits (141), Expect = 1e-07
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVKGL KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 175 VVVKGLEKPRLVLKFIWMEKNIGLALDQVI 204
>ref|XP_020584649.1| 30S ribosomal protein 3, chloroplastic [Phalaenopsis equestris]
gb|AQX44225.1| 30S ribosomal protein 3-1 [Phalaenopsis equestris]
Length = 180
Score = 57.0 bits (136), Expect = 2e-07
Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 20/120 (16%)
Frame = -3
Query: 302 ASISLNATHFCSLTSQFQSNPRNPPTNVSP--ISPLSPNPTLFSSTXXXXXXXXXXXX-- 135
+SISL T S +++F+S PR+ PT+ P +SP S +P SS+
Sbjct: 3 SSISLQTTLPLS-SARFRSKPRSAPTSPIPFPLSPHSSSPLSLSSSSTMPPSPLLRRLQL 61
Query: 134 ----------------SXXXXXXXXXXXXEMVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+ ++VVK + KPRLVLKFIWMEKNIGLALDQ+I
Sbjct: 62 SAAAEDLKAPSPSTDSAIQEQAEVKKEKLKVVVKTVEKPRLVLKFIWMEKNIGLALDQMI 121
>ref|XP_019249277.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
attenuata]
gb|OIT00007.1| 30s ribosomal protein 3, chloroplastic [Nicotiana attenuata]
Length = 173
Score = 55.8 bits (133), Expect = 6e-07
Identities = 42/105 (40%), Positives = 51/105 (48%)
Frame = -3
Query: 317 WPEPMASISLNATHFCSLTSQFQSNPRNPPTNVSPISPLSPNPTLFSSTXXXXXXXXXXX 138
W +S + S T Q QS R P NVS + P N +F+++
Sbjct: 13 WVPAFSSQKYFSPKIVSFTKQQQSLSR--PFNVSALKPRR-NLGVFATSAVSFAEETSTQ 69
Query: 137 XSXXXXXXXXXXXXEMVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
S +VVK L KPRLVLKFIWMEKNIG+ALDQVI
Sbjct: 70 DSVSSAPLQKEKLG-VVVKPLEKPRLVLKFIWMEKNIGIALDQVI 113
>ref|XP_015962940.1| 30S ribosomal protein 3, chloroplastic isoform X2 [Arachis
duranensis]
Length = 178
Score = 55.8 bits (133), Expect = 6e-07
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Frame = -3
Query: 314 PEPMASISLNATHFCSLTSQFQSNPRNP------PTNVSPISPLSPNPT---LFSSTXXX 162
P + ++SL + F SQ QS P P P S L+PNP+ +F++
Sbjct: 9 PNVVPTLSLKPSTF---PSQSQSLPLRPLKASSFPNPKPFFSSLTPNPSKLSVFAAQSET 65
Query: 161 XXXXXXXXXSXXXXXXXXXXXXEMVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+ +VVK KPRLVLKFIWMEKNIG+ALDQ+I
Sbjct: 66 AQQIVAEDDATSSDSPPQPQKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMI 118
>gb|KVI02804.1| Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculus var. scolymus]
Length = 168
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 79 VVVKPMEKPRLVLKFIWMEKNIGLALDQVI 108
>ref|XP_023762728.1| 30S ribosomal protein 3, chloroplastic-like [Lactuca sativa]
gb|PLY86315.1| hypothetical protein LSAT_9X32940 [Lactuca sativa]
Length = 169
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 80 VVVKPMEKPRLVLKFIWMEKNIGLALDQVI 109
>ref|XP_016471783.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tabacum]
Length = 173
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK L KPRLVLKFIWMEKNIG+ALDQVI
Sbjct: 84 VVVKPLEKPRLVLKFIWMEKNIGIALDQVI 113
>ref|XP_009763742.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
sylvestris]
ref|XP_016436838.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tabacum]
Length = 173
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK L KPRLVLKFIWMEKNIG+ALDQVI
Sbjct: 84 VVVKPLEKPRLVLKFIWMEKNIGIALDQVI 113
>ref|XP_009615234.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tomentosiformis]
ref|XP_009604408.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tomentosiformis]
Length = 173
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK L KPRLVLKFIWMEKNIG+ALDQVI
Sbjct: 84 VVVKPLEKPRLVLKFIWMEKNIGIALDQVI 113
>ref|XP_020107544.1| 30S ribosomal protein 3-1, chloroplastic-like isoform X2 [Ananas
comosus]
Length = 200
Score = 55.5 bits (132), Expect = 1e-06
Identities = 35/104 (33%), Positives = 46/104 (44%)
Frame = -3
Query: 314 PEPMASISLNATHFCSLTSQFQSNPRNPPTNVSPISPLSPNPTLFSSTXXXXXXXXXXXX 135
P+P S ++ SL P P T + P SP+ + ++
Sbjct: 38 PKPFVSSISSSNPNPSLLIHSSLPPHKPRTLLQKPPPRSPSTSSSAAAAAAAADALETAA 97
Query: 134 SXXXXXXXXXXXXEMVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+V K + KPRLVLKF+WMEKNIGLALDQVI
Sbjct: 98 EESKELQGGEKQLRVVAKTMEKPRLVLKFVWMEKNIGLALDQVI 141
>gb|PON93482.1| Ribosomal protein PSRP-3/Ycf [Trema orientalis]
Length = 186
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK L KPRLVLKFIWMEKNIG+ALDQVI
Sbjct: 97 VVVKPLEKPRLVLKFIWMEKNIGIALDQVI 126
>gb|PON78210.1| Ribosomal protein PSRP-3/Ycf [Parasponia andersonii]
Length = 193
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK L KPRLVLKFIWMEKNIG+ALDQVI
Sbjct: 100 VVVKPLEKPRLVLKFIWMEKNIGIALDQVI 129
>ref|XP_010905855.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Elaeis
guineensis]
Length = 193
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 104 VVVKTMEKPRLVLKFIWMEKNIGLALDQVI 133
>gb|OMP06800.1| Ribosomal protein PSRP-3/Ycf65 [Corchorus olitorius]
Length = 180
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 91 VVVKQVEKPRLVLKFIWMEKNIGLALDQVI 120
>ref|XP_017250144.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Daucus
carota subsp. sativus]
ref|XP_017250145.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Daucus
carota subsp. sativus]
Length = 182
Score = 54.7 bits (130), Expect = 2e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKF+WMEKNIGLALDQVI
Sbjct: 93 VVVKPMEKPRLVLKFVWMEKNIGLALDQVI 122
>gb|OMO90244.1| Ribosomal protein PSRP-3/Ycf65 [Corchorus capsularis]
Length = 183
Score = 54.7 bits (130), Expect = 2e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKFIWMEKNIGLALDQVI
Sbjct: 94 VVVKQVEKPRLVLKFIWMEKNIGLALDQVI 123
>ref|XP_018815481.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Juglans
regia]
ref|XP_018815483.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Juglans
regia]
ref|XP_018815484.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Juglans
regia]
ref|XP_018815485.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Juglans
regia]
Length = 188
Score = 54.7 bits (130), Expect = 2e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK L KPRLVLKFIWMEKNIG+ALDQ+I
Sbjct: 99 VVVKSLEKPRLVLKFIWMEKNIGIALDQMI 128
>gb|APR63819.1| hypothetical protein [Populus tomentosa]
Length = 189
Score = 54.7 bits (130), Expect = 2e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKF+WMEKNIGLALDQVI
Sbjct: 98 LVVKQVEKPRLVLKFVWMEKNIGLALDQVI 127
>ref|XP_011021896.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Populus
euphratica]
Length = 189
Score = 54.7 bits (130), Expect = 2e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -3
Query: 92 MVVKGLRKPRLVLKFIWMEKNIGLALDQVI 3
+VVK + KPRLVLKF+WMEKNIGLALDQVI
Sbjct: 98 LVVKQVEKPRLVLKFVWMEKNIGLALDQVI 127