BLASTX nr result

ID: Ophiopogon24_contig00009446 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00009446
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK70662.1| uncharacterized protein A4U43_C04F210 [Asparagus ...    62   7e-08
ref|XP_020259633.1| zinc finger CCCH domain-containing protein 2...    62   7e-08
ref|XP_009401957.1| PREDICTED: zinc finger CCCH domain-containin...    60   5e-07
ref|XP_009401956.1| PREDICTED: zinc finger CCCH domain-containin...    60   5e-07
ref|XP_008791527.1| PREDICTED: zinc finger CCCH domain-containin...    57   5e-06
ref|XP_020698044.1| zinc finger CCCH domain-containing protein 2...    56   9e-06
ref|XP_020698042.1| zinc finger CCCH domain-containing protein 2...    56   1e-05

>gb|ONK70662.1| uncharacterized protein A4U43_C04F210 [Asparagus officinalis]
          Length = 787

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 32/42 (76%), Positives = 33/42 (78%)
 Frame = +1

Query: 352 EVRSLDVDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           +V SLDV  EQMK EF RM QA AQGAA CSPPLPLT IVVQ
Sbjct: 322 QVCSLDVADEQMKIEFTRMAQAFAQGAASCSPPLPLTTIVVQ 363


>ref|XP_020259633.1| zinc finger CCCH domain-containing protein 24 [Asparagus
           officinalis]
          Length = 891

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 32/42 (76%), Positives = 33/42 (78%)
 Frame = +1

Query: 352 EVRSLDVDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           +V SLDV  EQMK EF RM QA AQGAA CSPPLPLT IVVQ
Sbjct: 426 QVCSLDVADEQMKIEFTRMAQAFAQGAASCSPPLPLTTIVVQ 467


>ref|XP_009401957.1| PREDICTED: zinc finger CCCH domain-containing protein 24 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 885

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 352 EVRSLDVDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           +V S DVD E MK+EFQ+MVQ LA GAA C PPLPLT IVVQ
Sbjct: 472 QVCSSDVDAEIMKNEFQKMVQCLAHGAAACQPPLPLTVIVVQ 513


>ref|XP_009401956.1| PREDICTED: zinc finger CCCH domain-containing protein 24 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 897

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +1

Query: 352 EVRSLDVDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           +V S DVD E MK+EFQ+MVQ LA GAA C PPLPLT IVVQ
Sbjct: 472 QVCSSDVDAEIMKNEFQKMVQCLAHGAAACQPPLPLTVIVVQ 513


>ref|XP_008791527.1| PREDICTED: zinc finger CCCH domain-containing protein 24 [Phoenix
           dactylifera]
          Length = 894

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +1

Query: 370 VDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           VD+E MK+EF RM Q L QGAA CSPPLPLT IVVQ
Sbjct: 445 VDEELMKNEFSRMTQVLTQGAASCSPPLPLTTIVVQ 480


>ref|XP_020698044.1| zinc finger CCCH domain-containing protein 24 isoform X3
           [Dendrobium catenatum]
          Length = 905

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 352 EVRSLDVDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           +V SL  ++EQ++SEF RM  AL  GAA CSPPLPLT IVVQ
Sbjct: 448 QVCSLGHEEEQLRSEFNRMTDALVHGAAACSPPLPLTAIVVQ 489


>ref|XP_020698042.1| zinc finger CCCH domain-containing protein 24 isoform X1
           [Dendrobium catenatum]
 ref|XP_020698043.1| zinc finger CCCH domain-containing protein 24 isoform X2
           [Dendrobium catenatum]
 gb|PKU80115.1| Zinc finger CCCH domain-containing protein 24 [Dendrobium
           catenatum]
          Length = 916

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 352 EVRSLDVDKEQMKSEFQRMVQALAQGAALCSPPLPLTRIVVQ 477
           +V SL  ++EQ++SEF RM  AL  GAA CSPPLPLT IVVQ
Sbjct: 448 QVCSLGHEEEQLRSEFNRMTDALVHGAAACSPPLPLTAIVVQ 489


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