BLASTX nr result
ID: Ophiopogon24_contig00009327
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00009327
(792 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020257348.1| pentatricopeptide repeat-containing protein ... 111 3e-24
ref|XP_010939594.1| PREDICTED: pentatricopeptide repeat-containi... 95 2e-18
ref|XP_009401449.1| PREDICTED: pentatricopeptide repeat-containi... 95 2e-18
ref|XP_008804499.1| PREDICTED: pentatricopeptide repeat-containi... 95 2e-18
ref|XP_020091071.1| pentatricopeptide repeat-containing protein ... 93 1e-17
gb|OAY79290.1| Pentatricopeptide repeat-containing protein, chlo... 91 6e-17
ref|XP_020701243.1| pentatricopeptide repeat-containing protein ... 90 8e-17
gb|PKU74097.1| Pentatricopeptide repeat-containing protein [Dend... 90 1e-16
gb|OIT18668.1| pentatricopeptide repeat-containing protein, chlo... 85 1e-16
ref|XP_020589669.1| pentatricopeptide repeat-containing protein ... 89 2e-16
gb|PKA64369.1| Pentatricopeptide repeat-containing protein [Apos... 89 2e-16
emb|CDP01388.1| unnamed protein product [Coffea canephora] 87 8e-16
ref|XP_016441969.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-15
ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-15
ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containi... 85 6e-15
ref|XP_015890905.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-15
ref|XP_019224228.1| PREDICTED: pentatricopeptide repeat-containi... 84 8e-15
ref|XP_016444053.1| PREDICTED: pentatricopeptide repeat-containi... 84 8e-15
ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containi... 84 8e-15
ref|XP_008440667.1| PREDICTED: pentatricopeptide repeat-containi... 84 9e-15
>ref|XP_020257348.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Asparagus officinalis]
gb|ONK75482.1| uncharacterized protein A4U43_C03F17320 [Asparagus officinalis]
Length = 493
Score = 111 bits (277), Expect = 3e-24
Identities = 55/82 (67%), Positives = 61/82 (74%)
Frame = +1
Query: 112 KRPVRIATFXXXXXXXXXXXXXSLRGISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVR 291
K P +I TF L GISEP+ELVR ILKKS +EK+PLV+TLGKYV V+R
Sbjct: 42 KDPSKIVTFCCRRLPRRRAAPPRLGGISEPEELVRTILKKSSEEKKPLVATLGKYVRVLR 101
Query: 292 TEHCFLLFEELGKRDNWLQCLE 357
TEHCFLLFEELGKRDNWLQCLE
Sbjct: 102 TEHCFLLFEELGKRDNWLQCLE 123
>ref|XP_010939594.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Elaeis guineensis]
Length = 487
Score = 95.1 bits (235), Expect = 2e-18
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G E +ELVR+IL+K+GD K+PLV+TL KYV+VVRTEHCF+LFEELGKRD+WLQCLE
Sbjct: 61 GQPEAEELVRVILRKAGDGKEPLVATLSKYVKVVRTEHCFMLFEELGKRDSWLQCLE 117
>ref|XP_009401449.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 498
Score = 95.1 bits (235), Expect = 2e-18
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +1
Query: 184 RGISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
R SE ELVR++L+KSGD K+PLV TL K+V VVRTEHCFLLFEELGKRDNWLQCLE
Sbjct: 73 RDDSEAAELVRVVLRKSGDGKEPLVVTLSKFVRVVRTEHCFLLFEELGKRDNWLQCLE 130
>ref|XP_008804499.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Phoenix dactylifera]
Length = 485
Score = 94.7 bits (234), Expect = 2e-18
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G E +ELVR+IL+K+G K+PLV+TLGKYV+VVRTEHCF+LFEELGKRD+WLQCLE
Sbjct: 61 GQPEEEELVRVILRKAGGGKEPLVATLGKYVKVVRTEHCFMLFEELGKRDSWLQCLE 117
>ref|XP_020091071.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Ananas comosus]
Length = 500
Score = 92.8 bits (229), Expect = 1e-17
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G SE +ELVR++L++SG K+PLV+TL KYV VVRTEHCFLLFEELGKRD WLQCLE
Sbjct: 69 GSSEVEELVRLLLRRSGVGKEPLVATLDKYVRVVRTEHCFLLFEELGKRDGWLQCLE 125
>gb|OAY79290.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 500
Score = 90.5 bits (223), Expect = 6e-17
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G SE +ELVR++L++SG K+PLV+ L KYV VVRTEHCFLLFEELGKRD WLQCLE
Sbjct: 69 GSSEVEELVRLLLRRSGVGKEPLVAMLDKYVRVVRTEHCFLLFEELGKRDGWLQCLE 125
>ref|XP_020701243.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Dendrobium catenatum]
Length = 487
Score = 90.1 bits (222), Expect = 8e-17
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1
Query: 196 EPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
E DELVR++L+K GDEK PLV+TL KYV VRTEHCFLLFEELG++D WLQCLE
Sbjct: 81 EVDELVRVLLRKVGDEKFPLVTTLNKYVRTVRTEHCFLLFEELGRQDKWLQCLE 134
>gb|PKU74097.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 550
Score = 90.1 bits (222), Expect = 1e-16
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1
Query: 196 EPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
E DELVR++L+K GDEK PLV+TL KYV VRTEHCFLLFEELG++D WLQCLE
Sbjct: 144 EVDELVRVLLRKVGDEKFPLVTTLNKYVRTVRTEHCFLLFEELGRQDKWLQCLE 197
>gb|OIT18668.1| pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 171
Score = 85.1 bits (209), Expect = 1e-16
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLERAS 366
G SE ELV +++K D+K PLVSTL KYV+ VRTEHCFLLFEELGK DNWLQCLE
Sbjct: 64 GSSEAQELVTLLMKNFSDKK-PLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLEELV 122
Query: 367 Q 369
Q
Sbjct: 123 Q 123
>ref|XP_020589669.1| pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Phalaenopsis equestris]
Length = 487
Score = 89.4 bits (220), Expect = 2e-16
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +1
Query: 193 SEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
+E +EL+R++L+K+GDEK PLV+TL KYV VRTEHCFLLFEELG++D WLQCLE
Sbjct: 80 TESEELMRVLLRKAGDEKFPLVTTLNKYVRTVRTEHCFLLFEELGRQDKWLQCLE 134
>gb|PKA64369.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 476
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/59 (71%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +1
Query: 184 RGI-SEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
RG+ SE +++VR++L+K+ D K PLVSTL KYV VRTEHCFLLFEELGKRD WLQCLE
Sbjct: 62 RGVASEAEDVVRILLRKASDLKYPLVSTLNKYVTTVRTEHCFLLFEELGKRDKWLQCLE 120
>emb|CDP01388.1| unnamed protein product [Coffea canephora]
Length = 598
Score = 87.4 bits (215), Expect = 8e-16
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 184 RGISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
R ISE +ELV ++++ ++KQPLV+TL KYV++VRTEHCFLLFEELGK D WLQCLE
Sbjct: 134 RAISEAEELVGLLMRNFDEKKQPLVATLNKYVKLVRTEHCFLLFEELGKTDKWLQCLE 191
>ref|XP_016441969.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Nicotiana tabacum]
Length = 488
Score = 86.3 bits (212), Expect = 2e-15
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = +1
Query: 178 SLRGISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
S RG SE ELV ++++ D+K PLVSTL KYV+ VRTEHCFLLFEELGK DNWLQCLE
Sbjct: 61 STRGSSEAQELVTLLMRNFSDKK-PLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLE 119
>ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nicotiana tomentosiformis]
Length = 488
Score = 86.3 bits (212), Expect = 2e-15
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = +1
Query: 178 SLRGISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
S RG SE ELV ++++ D+K PLVSTL KYV+ VRTEHCFLLFEELGK DNWLQCLE
Sbjct: 61 STRGSSEEQELVTLLMRNFSDKK-PLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLE 119
>ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nelumbo nucifera]
Length = 491
Score = 84.7 bits (208), Expect = 6e-15
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 193 SEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
SE ELVR +L+ D+K PLVSTL KYV++VRTEHCFLLFEELGKRD WLQCLE
Sbjct: 67 SEAGELVRFLLRNFSDQK-PLVSTLNKYVKLVRTEHCFLLFEELGKRDRWLQCLE 120
>ref|XP_015890905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Ziziphus jujuba]
Length = 128
Score = 79.3 bits (194), Expect = 6e-15
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 193 SEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLERASQ 369
SE +ELVR++++ D K+PL+ TL KYV++VRTEHCF LFEELGK D WLQCLE ++
Sbjct: 63 SEAEELVRLLMRSFSD-KEPLLKTLNKYVKIVRTEHCFHLFEELGKSDKWLQCLEENAE 120
>ref|XP_019224228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nicotiana attenuata]
gb|OIT33517.1| pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 488
Score = 84.3 bits (207), Expect = 8e-15
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G SE ELV +++K D+K PLVSTL KYV+ VRTEHCFLLFEELGK DNWLQCLE
Sbjct: 64 GSSEAQELVTLLMKNFSDKK-PLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLE 119
>ref|XP_016444053.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Nicotiana tabacum]
Length = 488
Score = 84.3 bits (207), Expect = 8e-15
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G SE ELV +++K D+K PLVSTL KYV+ VRTEHCFLLFEELGK DNWLQCLE
Sbjct: 64 GSSEAQELVTLLMKNFSDKK-PLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLE 119
>ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Nicotiana sylvestris]
Length = 488
Score = 84.3 bits (207), Expect = 8e-15
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = +1
Query: 187 GISEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
G SE ELV +++K D+K PLVSTL KYV+ VRTEHCFLLFEELGK DNWLQCLE
Sbjct: 64 GSSEAQELVTLLMKNFSDKK-PLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLE 119
>ref|XP_008440667.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Cucumis melo]
Length = 531
Score = 84.3 bits (207), Expect = 9e-15
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 193 SEPDELVRMILKKSGDEKQPLVSTLGKYVEVVRTEHCFLLFEELGKRDNWLQCLE 357
SE +ELVR I+KK D K+PL+ TL KYV V+RTEHCFLLFEELGKRD WLQCLE
Sbjct: 62 SEAEELVRGIIKKFSD-KEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLE 115