BLASTX nr result

ID: Ophiopogon24_contig00009260 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00009260
         (481 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265584.1| CBS domain-containing protein CBSX1, chlorop...    72   2e-12
gb|ONK70328.1| uncharacterized protein A4U43_C05F32600 [Asparagu...    72   5e-12

>ref|XP_020265584.1| CBS domain-containing protein CBSX1, chloroplastic [Asparagus
           officinalis]
          Length = 240

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 43/72 (59%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +2

Query: 275 MDTVLAISSTFCPLLAQSSSSVASKPCLPLDGRGFSSCRLSRRRFW---PSTSGGNSSLV 445
           MDT L I+S  CPLL  SSSS+ SKP LPL GRGF S R SRR+     PSTSG   S  
Sbjct: 1   MDTAL-IASNLCPLLTPSSSSLKSKPYLPLHGRGFFSSRHSRRQLLHTKPSTSGSGPSAF 59

Query: 446 AVAGNGSVITNS 481
           AVA NG+V+ NS
Sbjct: 60  AVAKNGAVVANS 71


>gb|ONK70328.1| uncharacterized protein A4U43_C05F32600 [Asparagus officinalis]
          Length = 318

 Score = 72.4 bits (176), Expect = 5e-12
 Identities = 43/72 (59%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +2

Query: 275 MDTVLAISSTFCPLLAQSSSSVASKPCLPLDGRGFSSCRLSRRRFW---PSTSGGNSSLV 445
           MDT L I+S  CPLL  SSSS+ SKP LPL GRGF S R SRR+     PSTSG   S  
Sbjct: 1   MDTAL-IASNLCPLLTPSSSSLKSKPYLPLHGRGFFSSRHSRRQLLHTKPSTSGSGPSAF 59

Query: 446 AVAGNGSVITNS 481
           AVA NG+V+ NS
Sbjct: 60  AVAKNGAVVANS 71


Top