BLASTX nr result
ID: Ophiopogon24_contig00009022
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00009022
(466 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP59561.1| Zinc finger CCCH domain-containing protein 46 [Ca... 144 2e-37
gb|KYP67977.1| Zinc finger CCCH domain-containing protein 46 [Ca... 142 2e-36
ref|XP_013605153.1| PREDICTED: zinc finger CCCH domain-containin... 137 4e-35
ref|XP_013742702.1| zinc finger CCCH domain-containing protein 4... 137 4e-35
ref|XP_009139492.1| PREDICTED: zinc finger CCCH domain-containin... 137 4e-35
ref|XP_013686707.1| zinc finger CCCH domain-containing protein 4... 134 5e-34
ref|XP_013637017.1| PREDICTED: zinc finger CCCH domain-containin... 134 5e-34
ref|XP_018484746.1| PREDICTED: zinc finger CCCH domain-containin... 134 6e-34
ref|XP_013745712.1| zinc finger CCCH domain-containing protein 4... 132 2e-33
emb|CBI17184.3| unnamed protein product, partial [Vitis vinifera] 133 3e-33
ref|XP_018513605.1| PREDICTED: zinc finger CCCH domain-containin... 132 3e-33
ref|XP_009136644.1| PREDICTED: zinc finger CCCH domain-containin... 132 3e-33
ref|XP_018513604.1| PREDICTED: zinc finger CCCH domain-containin... 132 4e-33
gb|PPS08216.1| hypothetical protein GOBAR_AA12423 [Gossypium bar... 130 1e-32
ref|XP_017620087.1| PREDICTED: zinc finger CCCH domain-containin... 130 1e-32
ref|XP_016720966.1| PREDICTED: zinc finger CCCH domain-containin... 130 2e-32
ref|XP_006292618.1| zinc finger CCCH domain-containing protein 4... 130 2e-32
gb|PPD98576.1| hypothetical protein GOBAR_DD04386 [Gossypium bar... 129 2e-32
ref|XP_019084843.1| PREDICTED: zinc finger CCCH domain-containin... 129 4e-32
ref|XP_010515635.1| PREDICTED: zinc finger CCCH domain-containin... 127 1e-31
>gb|KYP59561.1| Zinc finger CCCH domain-containing protein 46 [Cajanus cajan]
Length = 629
Score = 144 bits (364), Expect = 2e-37
Identities = 85/163 (52%), Positives = 99/163 (60%), Gaps = 9/163 (5%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQL- 288
ATRIVFSRIQ+LDP++A+KIMGLLLIQDHGEKEMIRLAFGPEAL+H+VI KARKELG
Sbjct: 6 ATRIVFSRIQSLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVIFKARKELGLSL 65
Query: 287 -SPSTPLSLISRQNSSRGGPNSPHLWPPHLPFSRSNISDDGCGGV-------VXXXXXXX 132
SPS P + S G P +L +S+S +S GV
Sbjct: 66 NSPSAPFTPSSPSPFLSGNPVPISRQSSYLFYSQSELSSSPSNGVGGDPSLFPSYGWGGS 125
Query: 131 XXXXXXXXXQADPGGYWDQGGLGWKPCLYFARGFCKNGSSCRF 3
A G GLGWKPCLYFARG+CKNG++CRF
Sbjct: 126 LHRRSCSVNDACLGSEDPISGLGWKPCLYFARGYCKNGTNCRF 168
>gb|KYP67977.1| Zinc finger CCCH domain-containing protein 46 [Cajanus cajan]
Length = 622
Score = 142 bits (357), Expect = 2e-36
Identities = 91/176 (51%), Positives = 106/176 (60%), Gaps = 22/176 (12%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIVFSRIQ LDP++A+KIMG+LL+QDHGEKEMIRLAFGPEAL+H+VI+KARKELG S
Sbjct: 6 ATRIVFSRIQNLDPENASKIMGMLLLQDHGEKEMIRLAFGPEALVHSVIVKARKELGLPS 65
Query: 284 -----PSTPLS---LISRQNSSRGG-------PNS---PHLWPPH----LPFSRSNISDD 171
PSTP S + RQNS+ P S P L+P + RS +D
Sbjct: 66 NSPPTPSTPPSPSPFLFRQNSTSSSRLNLSSSPTSAADPSLFPSYGWGGSLHRRSCSVND 125
Query: 170 GCGGVVXXXXXXXXXXXXXXXXQADPGGYWDQGGLGWKPCLYFARGFCKNGSSCRF 3
C G DP GLGWKPCLYFARG+CKNG+SCRF
Sbjct: 126 ACLG------------------SEDPNS-----GLGWKPCLYFARGYCKNGTSCRF 158
>ref|XP_013605153.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Brassica oleracea var. oleracea]
ref|XP_013605154.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Brassica oleracea var. oleracea]
ref|XP_013605155.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Brassica oleracea var. oleracea]
ref|XP_013663176.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
ref|XP_022550884.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
ref|XP_022550885.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
ref|XP_022550886.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
ref|XP_022563872.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
ref|XP_022563873.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
Length = 527
Score = 137 bits (345), Expect = 4e-35
Identities = 82/159 (51%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDPD+A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI K +KELG +S
Sbjct: 6 ATRIVLSRIQALDPDNASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKGKKELGLMS 65
Query: 284 PSTPL----SLISRQNSSRGGPNSPHLWPPHLPFSRSNISDDGCGGVVXXXXXXXXXXXX 117
S PL LIS +N++RG +P P + + +
Sbjct: 66 CSRPLWSQEELISPKNNTRGSSLNPASLPFYANGGGRSFKEMTNEFEFMDDVNLGSVHAR 125
Query: 116 XXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC YFARGFCKNGSSCRF
Sbjct: 126 SGSCGFDGLGYGDSDLGFGGVPCSYFARGFCKNGSSCRF 164
>ref|XP_013742702.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
Length = 534
Score = 137 bits (345), Expect = 4e-35
Identities = 84/167 (50%), Positives = 100/167 (59%), Gaps = 13/167 (7%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI KA+KELG +S
Sbjct: 6 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKELGLMS 65
Query: 284 PSTPL----SLISRQNSSRGGPNSPHLWPPHLPF------SRSNISD--DGCGGVVXXXX 141
S P LIS +N++ L P LPF S N+++ + V
Sbjct: 66 CSRPSWSQEELISPRNNNNNNNRGSSLNPASLPFYANGARSSKNLTNEFEFMDDVNPRSD 125
Query: 140 XXXXXXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC Y+ARGFCKNGSSCRF
Sbjct: 126 FLGSVHARSGSCVLDGLGYGDSDLGFGGVPCSYYARGFCKNGSSCRF 172
>ref|XP_009139492.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Brassica
rapa]
Length = 534
Score = 137 bits (345), Expect = 4e-35
Identities = 84/167 (50%), Positives = 100/167 (59%), Gaps = 13/167 (7%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI KA+KELG +S
Sbjct: 6 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKELGLMS 65
Query: 284 PSTPL----SLISRQNSSRGGPNSPHLWPPHLPF------SRSNISD--DGCGGVVXXXX 141
S P LIS +N++ L P LPF S N+++ + V
Sbjct: 66 CSRPSWSQEELISPRNNNNNNNRGSSLNPASLPFYANGARSSKNLTNEFEFMDDVNPRSD 125
Query: 140 XXXXXXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC Y+ARGFCKNGSSCRF
Sbjct: 126 FLGSVHARSGSCVLDGLGYGDSDLGFGGVPCSYYARGFCKNGSSCRF 172
>ref|XP_013686707.1| zinc finger CCCH domain-containing protein 46 [Brassica napus]
Length = 531
Score = 134 bits (337), Expect = 5e-34
Identities = 85/167 (50%), Positives = 102/167 (61%), Gaps = 13/167 (7%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI KA+KELG +S
Sbjct: 6 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKELGLMS 65
Query: 284 PSTPL----SLISRQNSSRGGPNSPHLWPPHLPF------SRSNISD--DGCGGVVXXXX 141
S P LIS +N++ +S L P LPF S N+++ + V
Sbjct: 66 CSRPSWSQEELISPRNNNNNRGSS--LNPASLPFYANGGRSSKNLTNEFEFMDDVNPRSD 123
Query: 140 XXXXXXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC Y+ARGFCKNGSSCRF
Sbjct: 124 FLGSMHARSGSCVLDGLGYGDSDLGFGGVPCSYYARGFCKNGSSCRF 170
>ref|XP_013637017.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Brassica
oleracea var. oleracea]
Length = 531
Score = 134 bits (337), Expect = 5e-34
Identities = 85/167 (50%), Positives = 102/167 (61%), Gaps = 13/167 (7%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI KA+KELG +S
Sbjct: 6 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKELGLMS 65
Query: 284 PSTPL----SLISRQNSSRGGPNSPHLWPPHLPF------SRSNISD--DGCGGVVXXXX 141
S P LIS +N++ +S L P LPF S N+++ + V
Sbjct: 66 CSRPSWSQEELISPRNNNNNRGSS--LNPASLPFYANGGRSSKNLTNEFEFMDDVNPRSD 123
Query: 140 XXXXXXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC Y+ARGFCKNGSSCRF
Sbjct: 124 FLGSMHARSGSCVLDGLGYGDSDLGFGGVPCSYYARGFCKNGSSCRF 170
>ref|XP_018484746.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Raphanus
sativus]
ref|XP_018484747.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Raphanus
sativus]
ref|XP_018484772.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Raphanus
sativus]
ref|XP_018484773.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Raphanus
sativus]
ref|XP_018484774.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Raphanus
sativus]
Length = 538
Score = 134 bits (337), Expect = 6e-34
Identities = 82/163 (50%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI KA+KELG +S
Sbjct: 6 ATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKELGLMS 65
Query: 284 PSTPL----SLIS-RQNSSRGGPNSPHLWPPHLPFSRSN---ISDDGCGGVVXXXXXXXX 129
S P LIS R N++RG +P P + +RS+ +++ V
Sbjct: 66 CSRPSWSQEELISPRNNNNRGSSLNPASLPFYANGARSSKEMTNNEFMDDVNPRGDFLGS 125
Query: 128 XXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC Y+ARGFCKNGS+CRF
Sbjct: 126 VHARSGSCVLDGLGYGDSDLGFGGVPCSYYARGFCKNGSNCRF 168
>ref|XP_013745712.1| zinc finger CCCH domain-containing protein 46-like [Brassica napus]
Length = 552
Score = 132 bits (333), Expect = 2e-33
Identities = 85/165 (51%), Positives = 103/165 (62%), Gaps = 11/165 (6%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI+K +KELG ++
Sbjct: 57 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKTKKELGLMT 116
Query: 284 PS---TPLSLIS-RQNSSRGGPNSPHLWPPHLPF----SRSNISDDGCGGVVXXXXXXXX 129
S + LIS + N++RGG + L P LPF RS ++ C V
Sbjct: 117 RSPWRSQEELISPKNNNNRGGSS---LNPASLPFYANGGRSLANEFECIDDVNSRAKNLL 173
Query: 128 XXXXXXXXQA--DPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D G+ D G G PC YFARGFCKNGSSCRF
Sbjct: 174 DSVHARSGGCVLDGLGFGDSDLGFGGVPCSYFARGFCKNGSSCRF 218
>emb|CBI17184.3| unnamed protein product, partial [Vitis vinifera]
Length = 615
Score = 133 bits (334), Expect = 3e-33
Identities = 83/164 (50%), Positives = 98/164 (59%), Gaps = 10/164 (6%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMG-LLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQL 288
ATRIVFSRIQALDP++A+KIMG +LLIQDHGEKEMIRLAFGPE LLH +ILKA+ +LG L
Sbjct: 6 ATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKTQLGIL 65
Query: 287 S--PSTPLSL-----ISRQNS--SRGGPNSPHLWPPHLPFSRSNISDDGCGGVVXXXXXX 135
S PSTP S IS+ + G N WP FS + +
Sbjct: 66 SNTPSTPTSPSPFNPISKPTRLPTNNGFNPSSSWPVS-GFSDLRSPNSTTAQLSYAALHR 124
Query: 134 XXXXXXXXXXQADPGGYWDQGGLGWKPCLYFARGFCKNGSSCRF 3
+D G G GWKPCLYFARGFCKNG++C+F
Sbjct: 125 RSYSFNDACYGSDDGA----SGFGWKPCLYFARGFCKNGNTCKF 164
>ref|XP_018513605.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform X3 [Brassica rapa]
Length = 546
Score = 132 bits (332), Expect = 3e-33
Identities = 81/164 (49%), Positives = 99/164 (60%), Gaps = 10/164 (6%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI+K +KELG ++
Sbjct: 57 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKTKKELGLMT 116
Query: 284 PS---TPLSLISRQNSSRGGPNSPHLWPPHLPF----SRSNISDDGCGGVVXXXXXXXXX 126
+ + LIS +N++ L P LPF RS ++ C V
Sbjct: 117 RTHWRSQEELISPKNNNNNNRRGSSLNPASLPFYANGGRSLANEFECIDDVNSRAKNLLD 176
Query: 125 XXXXXXXQA--DPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D G+ D G G PC YFARGFCKNGSSCRF
Sbjct: 177 SVHARSGGCVLDGLGFGDSDLGFGGVPCSYFARGFCKNGSSCRF 220
>ref|XP_009136644.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform X2 [Brassica rapa]
Length = 553
Score = 132 bits (332), Expect = 3e-33
Identities = 81/164 (49%), Positives = 99/164 (60%), Gaps = 10/164 (6%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI+K +KELG ++
Sbjct: 57 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKTKKELGLMT 116
Query: 284 PS---TPLSLISRQNSSRGGPNSPHLWPPHLPF----SRSNISDDGCGGVVXXXXXXXXX 126
+ + LIS +N++ L P LPF RS ++ C V
Sbjct: 117 RTHWRSQEELISPKNNNNNNRRGSSLNPASLPFYANGGRSLANEFECIDDVNSRAKNLLD 176
Query: 125 XXXXXXXQA--DPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D G+ D G G PC YFARGFCKNGSSCRF
Sbjct: 177 SVHARSGGCVLDGLGFGDSDLGFGGVPCSYFARGFCKNGSSCRF 220
>ref|XP_018513604.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform X1 [Brassica rapa]
Length = 562
Score = 132 bits (332), Expect = 4e-33
Identities = 81/164 (49%), Positives = 99/164 (60%), Gaps = 10/164 (6%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQALDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI+K +KELG ++
Sbjct: 57 ATRIVLSRIQALDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKTKKELGLMT 116
Query: 284 PS---TPLSLISRQNSSRGGPNSPHLWPPHLPF----SRSNISDDGCGGVVXXXXXXXXX 126
+ + LIS +N++ L P LPF RS ++ C V
Sbjct: 117 RTHWRSQEELISPKNNNNNNRRGSSLNPASLPFYANGGRSLANEFECIDDVNSRAKNLLD 176
Query: 125 XXXXXXXQA--DPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D G+ D G G PC YFARGFCKNGSSCRF
Sbjct: 177 SVHARSGGCVLDGLGFGDSDLGFGGVPCSYFARGFCKNGSSCRF 220
>gb|PPS08216.1| hypothetical protein GOBAR_AA12423 [Gossypium barbadense]
Length = 494
Score = 130 bits (327), Expect = 1e-32
Identities = 78/169 (46%), Positives = 99/169 (58%), Gaps = 15/169 (8%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIVFSRIQ+L+P++A++IMGLLLIQDHG+KEMIRLAFGPEALLH+VILKA+KELG
Sbjct: 6 ATRIVFSRIQSLEPENASRIMGLLLIQDHGDKEMIRLAFGPEALLHSVILKAKKELG--- 62
Query: 284 PSTPLSLISRQNSSRGGPNSPHL-WPPHLPFSRSNISD---------DGCGGVVXXXXXX 135
P++ S + G N P L P P + + + D D CGG
Sbjct: 63 --LPINSSSSRLLGSNGVNLPFLSIPATNPSTFTGMVDEFQLQDQLADACGGNTDSIRFP 120
Query: 134 XXXXXXXXXXQADP-----GGYWDQGGLGWKPCLYFARGFCKNGSSCRF 3
+ G + W+PCLYFARG+CKNG++CRF
Sbjct: 121 SYWGNTSFQRSNNTMNDILGADDPSSAIWWRPCLYFARGYCKNGNNCRF 169
>ref|XP_017620087.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Gossypium arboreum]
ref|XP_017620088.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Gossypium arboreum]
gb|KHG08640.1| hypothetical protein F383_14079 [Gossypium arboreum]
Length = 569
Score = 130 bits (328), Expect = 1e-32
Identities = 80/169 (47%), Positives = 101/169 (59%), Gaps = 15/169 (8%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIVFSRIQ+L+P++A++IMGLLLIQDHG+KEMIRLAFGPEALLH+VILKA+KELG
Sbjct: 6 ATRIVFSRIQSLEPENASRIMGLLLIQDHGDKEMIRLAFGPEALLHSVILKAKKELG--- 62
Query: 284 PSTPLSLISRQNSSRGGPNSPHLWPPHL-PFSRSNISD---------DGCGG----VVXX 147
P++ S + G N P L P P + + + D D CGG +
Sbjct: 63 --LPINSSSSRLLGSNGVNLPFLSIPGTNPSTFTGMVDEFQLQDQLADACGGNTDSIRFP 120
Query: 146 XXXXXXXXXXXXXXQADPGGYWD-QGGLGWKPCLYFARGFCKNGSSCRF 3
D G D + W+PCLYFARG+CKNG++CRF
Sbjct: 121 SYRGNTSFQRSNNTMTDILGADDPSSAIWWRPCLYFARGYCKNGNNCRF 169
>ref|XP_016720966.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Gossypium hirsutum]
ref|XP_016720967.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Gossypium hirsutum]
Length = 569
Score = 130 bits (327), Expect = 2e-32
Identities = 78/169 (46%), Positives = 99/169 (58%), Gaps = 15/169 (8%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIVFSRIQ+L+P++A++IMGLLLIQDHG+KEMIRLAFGPEALLH+VILKA+KELG
Sbjct: 6 ATRIVFSRIQSLEPENASRIMGLLLIQDHGDKEMIRLAFGPEALLHSVILKAKKELG--- 62
Query: 284 PSTPLSLISRQNSSRGGPNSPHL-WPPHLPFSRSNISD---------DGCGGVVXXXXXX 135
P++ S + G N P L P P + + + D D CGG
Sbjct: 63 --LPINSSSSRLLGSNGVNLPFLSIPATNPSTFTGMVDEFQLQDQLADACGGNTDSIRFP 120
Query: 134 XXXXXXXXXXQADP-----GGYWDQGGLGWKPCLYFARGFCKNGSSCRF 3
+ G + W+PCLYFARG+CKNG++CRF
Sbjct: 121 SYWGNTSFQRSNNTMNDILGADDPSSAIWWRPCLYFARGYCKNGNNCRF 169
>ref|XP_006292618.1| zinc finger CCCH domain-containing protein 46 [Capsella rubella]
ref|XP_023638227.1| zinc finger CCCH domain-containing protein 46 [Capsella rubella]
gb|EOA25516.1| hypothetical protein CARUB_v10018860mg [Capsella rubella]
Length = 538
Score = 130 bits (326), Expect = 2e-32
Identities = 86/168 (51%), Positives = 101/168 (60%), Gaps = 14/168 (8%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQ+LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VILKA+KELG ++
Sbjct: 6 ATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVILKAKKELGLMN 65
Query: 284 PS-TPLS----LISRQNSSRGGPNSPHLWPPHLPF-------SRSNISD-DGCGGVVXXX 144
S +P S LIS +N+ N P LPF SR SD + V
Sbjct: 66 GSRSPWSHQDELISPKNNRGSSLN-----PASLPFYANGGRSSRDLTSDFELLDDVNPRT 120
Query: 143 XXXXXXXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC YFARGFCKNG+SCRF
Sbjct: 121 DFLGSVHARSGSCVLDGLGYADSDLGFGGVPCSYFARGFCKNGASCRF 168
>gb|PPD98576.1| hypothetical protein GOBAR_DD04386 [Gossypium barbadense]
Length = 506
Score = 129 bits (325), Expect = 2e-32
Identities = 79/164 (48%), Positives = 97/164 (59%), Gaps = 11/164 (6%)
Frame = -3
Query: 461 TRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLSP 282
TRIVFSRIQ+L+P +A++IMGLLLIQDHG+KEMIRLAFGPEALLH+VILKA+KELG
Sbjct: 7 TRIVFSRIQSLEPGNASRIMGLLLIQDHGDKEMIRLAFGPEALLHSVILKAKKELG---- 62
Query: 281 STPLSLISRQNSSRGGPNSPHLWPP--HLPFSRSNISD---------DGCGGVVXXXXXX 135
P++ S + G N P L P + F+ + + D D CGG
Sbjct: 63 -LPINSSSSRLLGSNGVNLPFLSIPATNPSFTFTGMVDEFQLQDQLADACGGA------- 114
Query: 134 XXXXXXXXXXQADPGGYWDQGGLGWKPCLYFARGFCKNGSSCRF 3
DP W+PCLYFARGFCKNG++CRF
Sbjct: 115 -----------DDP-----SSAFLWRPCLYFARGFCKNGNNCRF 142
>ref|XP_019084843.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform X3 [Camelina sativa]
Length = 539
Score = 129 bits (324), Expect = 4e-32
Identities = 84/167 (50%), Positives = 97/167 (58%), Gaps = 13/167 (7%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQL- 288
ATRIV SRIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI+KA+KELG L
Sbjct: 6 ATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKELGLLN 65
Query: 287 ---SPSTPLSLISRQNSSRGGPNSPHLWPPHLPF-------SRSNISD-DGCGGVVXXXX 141
SP T + ++RG L P LPF SR +D D V
Sbjct: 66 GARSPWTHQEELISPKNNRGS----SLNPTSLPFYANGGRSSRDLTNDFDLLDDVNPRTD 121
Query: 140 XXXXXXXXXXXXQADPGGYWDQG-GLGWKPCLYFARGFCKNGSSCRF 3
D GY D G G PC YFARGFCKNG+SCRF
Sbjct: 122 FLGSVHARSGSCVLDGLGYGDSDLGFGGVPCSYFARGFCKNGASCRF 168
>ref|XP_010515635.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Camelina
sativa]
ref|XP_010515636.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Camelina
sativa]
ref|XP_010515637.1| PREDICTED: zinc finger CCCH domain-containing protein 46 [Camelina
sativa]
Length = 540
Score = 127 bits (320), Expect = 1e-31
Identities = 85/169 (50%), Positives = 100/169 (59%), Gaps = 15/169 (8%)
Frame = -3
Query: 464 ATRIVFSRIQALDPDSAAKIMGLLLIQDHGEKEMIRLAFGPEALLHTVILKARKELGQLS 285
ATRIV SRIQ+LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE L+H+VI+KA+KELG L+
Sbjct: 6 ATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKELGLLN 65
Query: 284 PS-TPLS----LISRQNSSRGGPNSPHLWPPHLPF-------SRSNISD-DGCGGVVXXX 144
S +P S LIS +N+ N P LPF SR +D D V
Sbjct: 66 GSRSPWSHQEELISPKNNRGSSLN-----PASLPFYANGGRSSRDLTNDFDLLDDVNPRT 120
Query: 143 XXXXXXXXXXXXXQADPGGYWDQG--GLGWKPCLYFARGFCKNGSSCRF 3
D GY G G PC YFARGFCKNG+SCRF
Sbjct: 121 DFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRF 169