BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00008773
         (864 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATI24740.1| ATP synthase CF0 subunit I (plastid) [Plukenetia ...    62   5e-07
gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    52   2e-06

>gb|ATI24740.1| ATP synthase CF0 subunit I (plastid) [Plukenetia volubilis]
          Length = 436

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 175 REDRLIILKKDTGMSIKYKIERESQMNRKIHVWFGKRSWK 56
           REDRLI++KK  G+S  + IERESQMNRKIHVWFGK SWK
Sbjct: 251 REDRLILVKKAMGIS-PWVIERESQMNRKIHVWFGKGSWK 289



 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = -3

Query: 862 FFGKGVCASCIFHE*VGSNRLHFIYVILYFYRINRKKCIISTNSF*VNS*IICKN--HSI 689
           FFGKGVCASC+F E  G N+L F     + + + + +C I      + S  I K+   +I
Sbjct: 43  FFGKGVCASCLFQEWAGLNQLRF-----FLFWLGKTRCRILR----ITSKWIWKSSLRTI 93

Query: 688 SLFIGKLTLILYQ--PTNNVRPLTWLKLNCLKSGHNMVLFLPL 566
           ++    +  I +    TNNV  L WLKLNCLKS  + V FL L
Sbjct: 94  AVRDSWVKWIYFDSLSTNNVGLLVWLKLNCLKSRCSKVFFLLL 136


>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
 prf||1102209F ORF 6
          Length = 79

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = +1

Query: 22  MKVDYLTINLTTSMISSRTKHESFDSFGSHAQ 117
           MKVDY +I    S+I SRTKHESFDSFGSHAQ
Sbjct: 1   MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQ 32



 Score = 29.6 bits (65), Expect(2) = 2e-06
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +3

Query: 168 SSLFLFVFKHIKTDTRTEY*EDSSDQTKNL 257
           SSLF+F  K I+T+   +Y EDSSD+ KN+
Sbjct: 51  SSLFIFQ-KDIETNVIPKYSEDSSDKIKNM 79