BLASTX nr result
ID: Ophiopogon24_contig00008658
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00008658
(516 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020256258.1| U1 small nuclear ribonucleoprotein 70 kDa [A... 77 4e-13
gb|OVA04517.1| RNA recognition motif domain [Macleaya cordata] 66 2e-09
ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotei... 63 2e-08
gb|KMZ59175.1| U1 small nuclear ribonucleoprotein 70 kDa [Zoster... 62 3e-08
ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 3e-08
ref|XP_009407689.1| PREDICTED: U1 small nuclear ribonucleoprotei... 62 5e-08
ref|XP_023754529.1| U1 small nuclear ribonucleoprotein 70 kDa [L... 62 6e-08
gb|PLY92491.1| hypothetical protein LSAT_2X76601 [Lactuca sativa] 62 6e-08
gb|OVA18690.1| RNA recognition motif domain [Macleaya cordata] 62 6e-08
ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotei... 61 9e-08
ref|XP_020677566.1| U1 small nuclear ribonucleoprotein 70 kDa is... 61 1e-07
ref|XP_010263700.1| PREDICTED: U1 small nuclear ribonucleoprotei... 60 2e-07
ref|XP_009408574.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 3e-07
ref|XP_011025766.1| PREDICTED: U1 small nuclear ribonucleoprotei... 60 3e-07
ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Popu... 60 3e-07
ref|XP_009408573.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 3e-07
ref|XP_009408572.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 4e-07
ref|XP_014520848.1| U1 small nuclear ribonucleoprotein 70 kDa [V... 59 4e-07
ref|XP_022009678.1| U1 small nuclear ribonucleoprotein 70 kDa-li... 59 4e-07
ref|XP_020094274.1| U1 small nuclear ribonucleoprotein 70 kDa [A... 59 4e-07
>ref|XP_020256258.1| U1 small nuclear ribonucleoprotein 70 kDa [Asparagus officinalis]
gb|ONK74490.1| uncharacterized protein A4U43_C03F6810 [Asparagus officinalis]
Length = 501
Score = 76.6 bits (187), Expect = 4e-13
Identities = 49/96 (51%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GEDLNQKNSGREQQQIASGGHRR
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGSTRIGGEDLNQKNSGREQQQIASGGHRR--------- 260
Query: 334 C**G*GEVPRKRE-RQGSGEGEVS*QAAR*RSEGRQ 230
E PR RE R + E S + R R R+
Sbjct: 261 -----SEEPRVREDRHVDRDREKSRERGRDRERERE 291
>gb|OVA04517.1| RNA recognition motif domain [Macleaya cordata]
Length = 495
Score = 66.2 bits (160), Expect = 2e-09
Identities = 43/95 (45%), Positives = 51/95 (53%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQK SGRE QQ+ASGG R + R
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSGREPQQVASGGPARSEEPRSR-- 267
Query: 334 C**G*GEVPRKRERQGSGEGEVS*QAAR*RSEGRQ 230
E RER+ S E E S + R R R+
Sbjct: 268 ------EDRHDRERKKSREREKSRERGRDRDRERE 296
>ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
dactylifera]
ref|XP_008783466.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
dactylifera]
Length = 512
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHR 365
LVDVERGRTVPNWRP+ GE++NQK+SGREQQQIASG R
Sbjct: 209 LVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKHSGREQQQIASGHSR 258
>gb|KMZ59175.1| U1 small nuclear ribonucleoprotein 70 kDa [Zostera marina]
Length = 501
Score = 62.4 bits (150), Expect = 3e-08
Identities = 39/79 (49%), Positives = 45/79 (56%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
+VDVERGRTV NWRP+ GEDLNQK SGRE QQIASGG + + R S
Sbjct: 211 IVDVERGRTVANWRPRKLGGGLGSTRVGGEDLNQKYSGREPQQIASGGASKSEEPRGRDS 270
Query: 334 C**G*GEVPRKRERQGSGE 278
+ RER+ SGE
Sbjct: 271 -------RHQDREREVSGE 282
>ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
acuminata subsp. malaccensis]
Length = 510
Score = 62.4 bits (150), Expect = 3e-08
Identities = 40/94 (42%), Positives = 53/94 (56%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQK+SGREQQQIA+ GH R + R
Sbjct: 209 LVDVERGRTVPNWRPRRLGGGLGSTRIGGEEVNQKHSGREQQQIAA-GHSRSEEPRARDD 267
Query: 334 C**G*GEVPRKRERQGSGEGEVS*QAAR*RSEGR 233
++ R++ R+ + E + R RS R
Sbjct: 268 -----RQLDREKSRERGRDREREVERPRDRSRER 296
>ref|XP_009407689.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
acuminata subsp. malaccensis]
ref|XP_018684811.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
acuminata subsp. malaccensis]
ref|XP_018684812.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
acuminata subsp. malaccensis]
Length = 505
Score = 62.0 bits (149), Expect = 5e-08
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHR 365
LVDVERGRTVPNWRP+ GE+ NQK+SGR+QQQIASG R
Sbjct: 209 LVDVERGRTVPNWRPRRLGGGLGSTRIGGEEANQKHSGRDQQQIASGSSR 258
>ref|XP_023754529.1| U1 small nuclear ribonucleoprotein 70 kDa [Lactuca sativa]
Length = 487
Score = 61.6 bits (148), Expect = 6e-08
Identities = 40/88 (45%), Positives = 46/88 (52%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQKNSGREQQQ SGG R +
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQKNSGREQQQ--SGGASRSVE------ 261
Query: 334 C**G*GEVPRKRERQGSGEGEVS*QAAR 251
PR E +G E E S + R
Sbjct: 262 --------PRATEERGDREREKSRERER 281
>gb|PLY92491.1| hypothetical protein LSAT_2X76601 [Lactuca sativa]
Length = 505
Score = 61.6 bits (148), Expect = 6e-08
Identities = 40/88 (45%), Positives = 46/88 (52%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQKNSGREQQQ SGG R +
Sbjct: 228 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQKNSGREQQQ--SGGASRSVE------ 279
Query: 334 C**G*GEVPRKRERQGSGEGEVS*QAAR 251
PR E +G E E S + R
Sbjct: 280 --------PRATEERGDREREKSRERER 299
>gb|OVA18690.1| RNA recognition motif domain [Macleaya cordata]
Length = 521
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/75 (48%), Positives = 41/75 (54%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQK SGRE QQ+ASGG R
Sbjct: 216 LVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSGREPQQVASGGAPR--------- 266
Query: 334 C**G*GEVPRKRERQ 290
E PR RE +
Sbjct: 267 -----SEEPRSREER 276
>ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Elaeis
guineensis]
Length = 520
Score = 61.2 bits (147), Expect = 9e-08
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHR 365
LVDVERGRTVPNWRP+ GE++NQK SGREQQQ+ASG R
Sbjct: 209 LVDVERGRTVPNWRPRRLGGGLGSTRIGGEEVNQKYSGREQQQVASGRPR 258
>ref|XP_020677566.1| U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Dendrobium
catenatum]
gb|PKU59292.1| U1 small nuclear ribonucleoprotein 70 kDa [Dendrobium catenatum]
Length = 515
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHR 365
LVDVERGRTVPNWRP+ GE++NQK+SGREQQQ ASG R
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKHSGREQQQAASGRPR 259
>ref|XP_010263700.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nelumbo
nucifera]
Length = 448
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/95 (44%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQK+SGREQQQI S R
Sbjct: 211 LVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKHSGREQQQIGSAPRPR--------- 261
Query: 334 C**G*GEVPRKRE-RQGSGEGEVS*QAAR*RSEGR 233
E PR RE R E E S R R R
Sbjct: 262 -----SEEPRAREDRHAEREREKSRDRGRDRKRER 291
>ref|XP_009408574.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X3 [Musa acuminata subsp. malaccensis]
Length = 209
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKS 350
LVDVE+GR+VPNWRPQ GE++NQK+SGREQQ+ AS GH R +S
Sbjct: 19 LVDVEQGRSVPNWRPQRLGGGLGTTRTGGEEVNQKHSGREQQKCAS-GHSRSEES 72
>ref|XP_011025766.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Populus
euphratica]
Length = 495
Score = 59.7 bits (143), Expect = 3e-07
Identities = 42/96 (43%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQK+SGRE QQ SGG R
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQKHSGREVQQ--SGGSSR--------- 258
Query: 334 C**G*GEVPRKRE-RQGSGEGEVS*QAAR*RSEGRQ 230
E PR RE RQ + EVS + R + R+
Sbjct: 259 -----SEEPRTREDRQTERDREVSRERGRDKERDRE 289
>ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
gb|PNT26767.1| hypothetical protein POPTR_007G026900v3 [Populus trichocarpa]
Length = 497
Score = 59.7 bits (143), Expect = 3e-07
Identities = 42/96 (43%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQK+SGRE QQ SGG R
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQKHSGREVQQ--SGGSSR--------- 258
Query: 334 C**G*GEVPRKRE-RQGSGEGEVS*QAAR*RSEGRQ 230
E PR RE RQ + EVS + R + R+
Sbjct: 259 -----SEEPRTREDRQTERDREVSRERGRDKERDRE 289
>ref|XP_009408573.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 222
Score = 58.5 bits (140), Expect = 3e-07
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKS 350
LVDVE+GR+VPNWRPQ GE++NQK+SGREQQ+ AS GH R +S
Sbjct: 43 LVDVEQGRSVPNWRPQRLGGGLGTTRTGGEEVNQKHSGREQQKCAS-GHSRSEES 96
>ref|XP_009408572.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_018684198.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 233
Score = 58.5 bits (140), Expect = 4e-07
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKS 350
LVDVE+GR+VPNWRPQ GE++NQK+SGREQQ+ AS GH R +S
Sbjct: 43 LVDVEQGRSVPNWRPQRLGGGLGTTRTGGEEVNQKHSGREQQKCAS-GHSRSEES 96
>ref|XP_014520848.1| U1 small nuclear ribonucleoprotein 70 kDa [Vigna radiata var.
radiata]
Length = 476
Score = 59.3 bits (142), Expect = 4e-07
Identities = 40/96 (41%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRRRTKSA*RTS 335
LVDVERGRTVPNWRP+ GE++NQ++SGREQQQ S
Sbjct: 214 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRS-------------- 259
Query: 334 C**G*GEVPRKRE-RQGSGEGEVS*QAAR*RSEGRQ 230
E PR RE R G + EVS + R R R+
Sbjct: 260 ------EEPRAREDRHGDRDREVSREKGRDRDRDRE 289
>ref|XP_022009678.1| U1 small nuclear ribonucleoprotein 70 kDa-like [Helianthus annuus]
gb|OTF98036.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Helianthus annuus]
Length = 477
Score = 59.3 bits (142), Expect = 4e-07
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRR 362
LVDVERGRTVPNWRP+ GE++NQKNSGREQQQ SGG R
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGTSRVGGEEVNQKNSGREQQQ--SGGATR 258
>ref|XP_020094274.1| U1 small nuclear ribonucleoprotein 70 kDa [Ananas comosus]
gb|OAY77921.1| U1 small nuclear ribonucleoprotein 70 kDa [Ananas comosus]
Length = 484
Score = 59.3 bits (142), Expect = 4e-07
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3
Query: 514 LVDVERGRTVPNWRPQXXXXXXXXXXXXGEDLNQKNSGREQQQIASGGHRR 362
LVDVERGRTVPNWRP+ E ++QKNS REQQQ+A+ G R
Sbjct: 210 LVDVERGRTVPNWRPRRLGGGLGSSRMGSEQIDQKNSSREQQQVAASGRLR 260