BLASTX nr result
ID: Ophiopogon24_contig00008629
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00008629
(533 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009416481.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-29
ref|XP_010915718.2| PREDICTED: pentatricopeptide repeat-containi... 117 1e-27
ref|XP_020597577.1| pentatricopeptide repeat-containing protein ... 112 2e-26
gb|PKA65335.1| Pentatricopeptide repeat-containing protein [Apos... 113 3e-26
ref|XP_020676490.1| pentatricopeptide repeat-containing protein ... 112 7e-26
ref|XP_008804628.2| PREDICTED: pentatricopeptide repeat-containi... 110 3e-25
gb|PKU80683.1| Pentatricopeptide repeat-containing protein [Dend... 110 4e-25
gb|PNT32034.1| hypothetical protein POPTR_006G164100v3 [Populus ... 103 1e-22
ref|XP_011012303.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-21
ref|XP_011012302.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-21
ref|XP_011012301.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-21
gb|PAN28734.1| hypothetical protein PAHAL_E01818 [Panicum hallii] 99 3e-21
ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-20
ref|XP_009351832.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-20
ref|XP_024179521.1| pentatricopeptide repeat-containing protein ... 97 2e-20
ref|XP_021816148.1| pentatricopeptide repeat-containing protein ... 97 2e-20
gb|PRQ60704.1| putative tetratricopeptide-like helical domain-co... 97 2e-20
ref|XP_015878568.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-20
ref|XP_020414260.1| pentatricopeptide repeat-containing protein ... 97 3e-20
ref|XP_008234568.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-20
>ref|XP_009416481.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Musa acuminata subsp. malaccensis]
Length = 465
Score = 122 bits (306), Expect = 2e-29
Identities = 59/110 (53%), Positives = 72/110 (65%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQ 383
D A A +L+SC DP+ AQ H + R +LL +PFHWN+LMRCYLR P +L L+ Q
Sbjct: 46 DPAAEAAARLESCADPEDLAQTHAHVLRAHLLRAPFHWNALMRCYLRLVRPRTSLLLYAQ 105
Query: 384 MRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
M R G PD YTLPL LKA +++ P G QLHC A+K GL H FTESG
Sbjct: 106 MSRSGTVPDCYTLPLALKAVALLFALPAGGQLHCTAVKLGLENHEFTESG 155
>ref|XP_010915718.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Elaeis guineensis]
Length = 485
Score = 117 bits (294), Expect = 1e-27
Identities = 60/110 (54%), Positives = 72/110 (65%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQ 383
D A +LATQL+S DP AQIHT + R +LL +PFHWN+LMR YLRH P L LF Q
Sbjct: 66 DRATSLATQLESRADPSELAQIHTHVLRHHLLLAPFHWNALMRSYLRHARPLHALLLFAQ 125
Query: 384 MRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
M GA PD Y++P+ LKAA +S GRQLH A+K GL + F ESG
Sbjct: 126 MSSSGATPDSYSIPIALKAASQTFSLAAGRQLHSAAVKLGLEFNEFCESG 175
>ref|XP_020597577.1| pentatricopeptide repeat-containing protein At1g77170-like, partial
[Phalaenopsis equestris]
Length = 329
Score = 112 bits (279), Expect = 2e-26
Identities = 56/108 (51%), Positives = 69/108 (63%)
Frame = +3
Query: 210 AKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQMR 389
A AT L SC D +QIH + R NLL PFHWNSLMRCY+R P L LF M
Sbjct: 14 AAAAATHLQSCFDQLELSQIHAFVLRRNLLLLPFHWNSLMRCYVRLSIPSSALHLFVHMS 73
Query: 390 RCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
R +PD Y+LP+ LKA+ +S GRQLH +A+KHGL+ H+F+ESG
Sbjct: 74 RACTYPDRYSLPIALKASFTSFSFSFGRQLHSVAIKHGLSRHQFSESG 121
>gb|PKA65335.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 461
Score = 113 bits (283), Expect = 3e-26
Identities = 58/104 (55%), Positives = 71/104 (68%)
Frame = +3
Query: 222 ATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQMRRCGA 401
A +L+SCTDP +QIH + R L+ PFHWNSLMRCYLR P TL LF +M R GA
Sbjct: 43 ALRLESCTDPSELSQIHAFVVRHRLVLVPFHWNSLMRCYLRLSRPTATLRLFIEMTRAGA 102
Query: 402 HPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
PD Y+LP+ LKAA +S +GRQLH +A+K LA H F+ESG
Sbjct: 103 MPDFYSLPIALKAAAISFSFFVGRQLHPIAVKLCLARHEFSESG 146
>ref|XP_020676490.1| pentatricopeptide repeat-containing protein At1g77170-like
[Dendrobium catenatum]
Length = 460
Score = 112 bits (280), Expect = 7e-26
Identities = 56/109 (51%), Positives = 72/109 (66%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQ 383
D A A +L SC+DP +QIH + R NLL+ FHWNSLMR YLR P +L LF
Sbjct: 41 DAAAAAAIRLHSCSDPLELSQIHAFVLRRNLLHLSFHWNSLMRGYLRLSIPSASLQLFLH 100
Query: 384 MRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTES 530
M R G +PD Y+LP+ LKAA +S +G QLH +A+KHGL+ H+F+ES
Sbjct: 101 MTRAGTYPDHYSLPIALKAAFTSFSFSIGHQLHSVAIKHGLSRHQFSES 149
>ref|XP_008804628.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Phoenix dactylifera]
Length = 461
Score = 110 bits (276), Expect = 3e-25
Identities = 57/108 (52%), Positives = 67/108 (62%)
Frame = +3
Query: 210 AKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQMR 389
A LATQL+SC P A IH + R +LL +PFHWN+LMR YLRH P L LF QM
Sbjct: 44 ATALATQLESCAGPSELAPIHAYVLRRHLLLAPFHWNALMRSYLRHARPLRALLLFAQMS 103
Query: 390 RCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
GA PD Y+LP+ LKAA +S GRQLH +K GL + F ESG
Sbjct: 104 SSGATPDSYSLPIALKAASQTFSLSSGRQLHTATVKLGLEFNEFCESG 151
>gb|PKU80683.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 468
Score = 110 bits (275), Expect = 4e-25
Identities = 55/107 (51%), Positives = 71/107 (66%)
Frame = +3
Query: 210 AKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQMR 389
A A +L SC+DP +QIH + R NLL+ FHWNSLMR YLR P +L LF M
Sbjct: 51 AAAAAIRLHSCSDPLELSQIHAFVLRRNLLHLSFHWNSLMRGYLRLSIPSASLQLFLHMT 110
Query: 390 RCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTES 530
R G +PD Y+LP+ LKAA +S +G QLH +A+KHGL+ H+F+ES
Sbjct: 111 RAGTYPDHYSLPIALKAAFTSFSFSIGHQLHSVAIKHGLSRHQFSES 157
>gb|PNT32034.1| hypothetical protein POPTR_006G164100v3 [Populus trichocarpa]
Length = 473
Score = 103 bits (258), Expect = 1e-22
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLAL 374
D +KT+ATQL +CT + Q + + R ++L+ +PFHWN+L+RCY R P L +
Sbjct: 51 DPSKTIATQLSNCTSLQELNQTYAHVIRTHVLDVYTAPFHWNNLIRCYTRLGAPNKALQI 110
Query: 375 FTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
+ M G PD YTLP+VLKAAC +S LGRQLH +A++ GL + + ESG
Sbjct: 111 YVSMSHAGISPDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLELNEYCESG 163
>ref|XP_011012303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
isoform X3 [Populus euphratica]
Length = 476
Score = 100 bits (250), Expect = 1e-21
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Frame = +3
Query: 213 KTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLALFTQ 383
KT+A+QL +CT + Q + + R +L+ +PFHWN+L+RCY R P L ++
Sbjct: 54 KTIASQLSNCTSLQELNQTYAHVIRTRVLDVYTAPFHWNNLIRCYTRLGAPNKALQIYVS 113
Query: 384 MRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
M G PD YTLP+VLKAAC +S LGRQLH +A++ GL + + ESG
Sbjct: 114 MSHAGISPDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLVLNEYCESG 163
>ref|XP_011012302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
isoform X2 [Populus euphratica]
Length = 483
Score = 100 bits (250), Expect = 1e-21
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Frame = +3
Query: 213 KTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLALFTQ 383
KT+A+QL +CT + Q + + R +L+ +PFHWN+L+RCY R P L ++
Sbjct: 54 KTIASQLSNCTSLQELNQTYAHVIRTRVLDVYTAPFHWNNLIRCYTRLGAPNKALQIYVS 113
Query: 384 MRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
M G PD YTLP+VLKAAC +S LGRQLH +A++ GL + + ESG
Sbjct: 114 MSHAGISPDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLVLNEYCESG 163
>ref|XP_011012301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
isoform X1 [Populus euphratica]
Length = 494
Score = 100 bits (250), Expect = 1e-21
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Frame = +3
Query: 213 KTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLALFTQ 383
KT+A+QL +CT + Q + + R +L+ +PFHWN+L+RCY R P L ++
Sbjct: 54 KTIASQLSNCTSLQELNQTYAHVIRTRVLDVYTAPFHWNNLIRCYTRLGAPNKALQIYVS 113
Query: 384 MRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
M G PD YTLP+VLKAAC +S LGRQLH +A++ GL + + ESG
Sbjct: 114 MSHAGISPDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLVLNEYCESG 163
>gb|PAN28734.1| hypothetical protein PAHAL_E01818 [Panicum hallii]
Length = 436
Score = 99.4 bits (246), Expect = 3e-21
Identities = 56/110 (50%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Frame = +3
Query: 207 LAKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQM 386
LA A +L+SC D +L +IH L R LL PFHWN+L R YLRH P P L M
Sbjct: 26 LADLAAARLESCADARLPPRIHASLLRRGLLLLPFHWNALTRAYLRHGSPRPALRAAACM 85
Query: 387 RRCGAHPDPYTLPLVLKAACHVY--SSPLGRQLHCLALKHGLAGHRFTES 530
GA PD YT PL LKAA S L QLH A+K GLA H FTES
Sbjct: 86 TAYGAAPDRYTFPLALKAAAQAEPPGSSLRLQLHAAAVKRGLARHPFTES 135
>ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Brachypodium distachyon]
gb|KQK09543.1| hypothetical protein BRADI_2g48635v3 [Brachypodium distachyon]
Length = 433
Score = 97.8 bits (242), Expect = 1e-20
Identities = 54/109 (49%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +3
Query: 210 AKTLATQLDSCTDPKLRAQIHTRLFRFNLLNSPFHWNSLMRCYLRHCHPGPTLALFTQMR 389
A A +L+SC D +L H L R LL PFHWN+L R YLRH L + M
Sbjct: 17 ADLAAARLESCDDGRLPPLFHAHLLRHGLLLLPFHWNALTRAYLRHGSSRSALCVAAHMF 76
Query: 390 RCGAHPDPYTLPLVLKAACHVYS--SPLGRQLHCLALKHGLAGHRFTES 530
RC AHPD YT PL LKAA S L RQ H A K GLA H FTES
Sbjct: 77 RCAAHPDRYTFPLALKAAAQGEPPISSLRRQFHAAAAKRGLARHPFTES 125
>ref|XP_009351832.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Pyrus x bretschneideri]
Length = 478
Score = 97.8 bits (242), Expect = 2e-20
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLAL 374
D AK ATQL +CT + QI+ + R ++L +PFHWN+++R Y R P L +
Sbjct: 50 DPAKVTATQLSNCTTLRELNQIYAHVIRTHMLRFYPAPFHWNNIIRSYARRDAPTKALFV 109
Query: 375 FTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
+ M R G PD YTLP+VLKA C +++ +GRQLH LA++ GL + F ESG
Sbjct: 110 YVAMSRSGVLPDCYTLPIVLKALCQLFAVHIGRQLHSLAIRLGLDTNEFCESG 162
>ref|XP_024179521.1| pentatricopeptide repeat-containing protein At1g77170,
mitochondrial-like [Rosa chinensis]
Length = 464
Score = 97.4 bits (241), Expect = 2e-20
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Frame = +3
Query: 198 IPDLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTL 368
IPD +TLATQL +CT QIH + R L +PFHWN+++R Y R P +L
Sbjct: 40 IPD-PETLATQLSNCTSLSELNQIHAHISRTQFLRLHPAPFHWNNIIRSYTRRDAPTKSL 98
Query: 369 ALFTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
++ M R G PD YT+P+VLK C +++ +GRQLH +A++ GL + F ESG
Sbjct: 99 FVYVSMSRAGVLPDCYTIPIVLKTLCQLFAVGIGRQLHSVAVRIGLDSNEFCESG 153
>ref|XP_021816148.1| pentatricopeptide repeat-containing protein At1g77170 [Prunus
avium]
Length = 478
Score = 97.4 bits (241), Expect = 2e-20
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLAL 374
D AK +ATQL +CT + QI+ + R +LL +PFHWN+++R Y R P L +
Sbjct: 56 DPAKIIATQLSNCTTLQELNQIYAHVIRTHLLQLYPAPFHWNNIIRSYTRRDAPTKALFV 115
Query: 375 FTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
+ M R G PD YTLP++LKA C +++ +GRQLH +AL+ GL + + ESG
Sbjct: 116 YLAMSRSGVLPDCYTLPIILKALCQLFAVEVGRQLHSVALRLGLDSNEYCESG 168
>gb|PRQ60704.1| putative tetratricopeptide-like helical domain-containing protein
[Rosa chinensis]
Length = 482
Score = 97.4 bits (241), Expect = 2e-20
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Frame = +3
Query: 198 IPDLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTL 368
IPD +TLATQL +CT QIH + R L +PFHWN+++R Y R P +L
Sbjct: 58 IPD-PETLATQLSNCTSLSELNQIHAHISRTQFLRLHPAPFHWNNIIRSYTRRDAPTKSL 116
Query: 369 ALFTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
++ M R G PD YT+P+VLK C +++ +GRQLH +A++ GL + F ESG
Sbjct: 117 FVYVSMSRAGVLPDCYTIPIVLKTLCQLFAVGIGRQLHSVAVRIGLDSNEFCESG 171
>ref|XP_015878568.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Ziziphus jujuba]
Length = 473
Score = 97.1 bits (240), Expect = 3e-20
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = +3
Query: 210 AKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLALFT 380
AK +ATQL + TD QI+ R+ R +L +PFHWN+++R Y R P L ++
Sbjct: 53 AKIVATQLSNSTDLPELNQIYARVIRTRMLEFYPAPFHWNNIIRSYTRLEAPRKALFVYV 112
Query: 381 QMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
M R G PD YTLP+VLKA C ++ +G+QLH +A+K GL H + ESG
Sbjct: 113 YMSRAGVLPDSYTLPIVLKAVCQYFAIEIGKQLHSVAVKLGLQSHEYCESG 163
>ref|XP_020414260.1| pentatricopeptide repeat-containing protein At1g77170 [Prunus
persica]
gb|ONI25908.1| hypothetical protein PRUPE_2G326000 [Prunus persica]
Length = 478
Score = 97.1 bits (240), Expect = 3e-20
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLAL 374
D AK +ATQL +CT + QI+ + R +LL +PFHWN+++R Y R P + +
Sbjct: 56 DPAKIIATQLSNCTTLQELNQIYAHVIRTHLLQLYTAPFHWNNIIRSYTRRDAPTKAIFV 115
Query: 375 FTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
+ M R G PD YTLP++LKA C +++ +GRQLH +AL+ GL + + ESG
Sbjct: 116 YLAMSRSGVLPDCYTLPIILKALCQLFAVEIGRQLHSVALRLGLDSNEYCESG 168
>ref|XP_008234568.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Prunus mume]
Length = 478
Score = 97.1 bits (240), Expect = 3e-20
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +3
Query: 204 DLAKTLATQLDSCTDPKLRAQIHTRLFRFNLLN---SPFHWNSLMRCYLRHCHPGPTLAL 374
D AK +ATQL +CT + QI+ + R +LL +PFHWN+++R Y R P + +
Sbjct: 56 DPAKIIATQLSNCTTLQELNQIYAHVIRTHLLQLYTAPFHWNNIIRSYTRRDAPTKAIFV 115
Query: 375 FTQMRRCGAHPDPYTLPLVLKAACHVYSSPLGRQLHCLALKHGLAGHRFTESG 533
+ M R G PD YTLP++LKA C +++ +GRQLH +AL+ GL + + ESG
Sbjct: 116 YLAMSRSGVLPDCYTLPIILKALCQLFAVEIGRQLHSVALRLGLDSNEYCESG 168