BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00008396
         (731 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKI65872.1| hypothetical protein CRG98_013735 [Punica granatum]    303   e-100
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   316   2e-96
gb|KYP59969.1| Retrovirus-related Pol polyprotein from transposo...   291   5e-95
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   312   8e-95
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   312   8e-95
gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposo...   290   1e-92
gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposo...   296   2e-92
gb|KYP45754.1| Retrovirus-related Pol polyprotein from transposo...   286   7e-92
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   302   2e-91
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         303   2e-91
gb|KYP54197.1| Retrovirus-related Pol polyprotein from transposo...   287   3e-91
gb|PKI75267.1| hypothetical protein CRG98_004307 [Punica granatum]    292   2e-90
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]      298   1e-89
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]   294   2e-89
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]   296   6e-89
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   296   8e-89
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   294   3e-88
gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposo...   290   5e-88
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   293   9e-88
gb|PKI59578.1| hypothetical protein CRG98_019987 [Punica granatum]    270   3e-87

>gb|PKI65872.1| hypothetical protein CRG98_013735 [Punica granatum]
          Length = 324

 Score =  303 bits (776), Expect = e-100
 Identities = 140/215 (65%), Positives = 177/215 (82%), Gaps = 1/215 (0%)
 Frame = +1

Query: 10  FIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCRE 189
           FIDD+S+K+WAY + +KD+V + FK FH AVERETG+ LK VR+DNGGEY G FE YCR 
Sbjct: 60  FIDDHSKKVWAYPMRTKDQVTEIFKNFHVAVERETGMKLKCVRADNGGEYRGLFENYCRT 119

Query: 190 HGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSPA 369
           HGI+ E+ VPKTPQQNGLAERMNRTI ER+R MLS AKL K+FWGEA+R+AVDLIN +P+
Sbjct: 120 HGIKLEKMVPKTPQQNGLAERMNRTIVERVRCMLSQAKLSKSFWGEAMRSAVDLINLTPS 179

Query: 370 YALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQFGF 549
             LD +VP+ VW+ K +SYKH++VFGCRA  HIP+DERSKLD K++ CI+LGY+ ++  +
Sbjct: 180 VTLDGDVPQQVWTGKKISYKHLRVFGCRASVHIPRDERSKLDAKAKQCIFLGYAYEEIEY 239

Query: 550 RLWDPEAKKVFRSRDVVFMEDQTIEDIKK-EKGQV 651
           R WDP++KK+ RS DVVF EDQTIED++K EK +V
Sbjct: 240 RFWDPDSKKIIRSMDVVFFEDQTIEDLQKLEKAKV 274


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  316 bits (810), Expect = 2e-96
 Identities = 154/247 (62%), Positives = 183/247 (74%), Gaps = 10/247 (4%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD+SRK+W Y + +KD+VL  FK+FHA VER TG  LK +R+DNGGEY GPFE Y
Sbjct: 497  FVTFIDDHSRKVWVYPLKTKDQVLQAFKEFHALVERATGRKLKCIRTDNGGEYLGPFEYY 556

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            C+ HGIRHE+  PKTPQ NG+AERMNRTI E++RSMLSHAK+PK+FWGEAV TA DLIN 
Sbjct: 557  CKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHAKIPKSFWGEAVLTAADLINL 616

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            SP+  L+ E+PE VWS K   Y H+KVFGCRAF HIPKDER+KLD K + CIYL    D+
Sbjct: 617  SPSRPLNGEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDERTKLDAKVKECIYLRSPKDE 676

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK-EKGQVKP---------SNDGGNVRDDI 690
             GFRLWDP  KK+ RSRDV+F EDQTI+DIKK EK + K          +N GG +   I
Sbjct: 677  LGFRLWDPVNKKIVRSRDVIFFEDQTIQDIKKPEKPKQKEVQDSSPIVINNSGGEISQRI 736

Query: 691  IVPSPGE 711
              P+  E
Sbjct: 737  DEPNQTE 743


>gb|KYP59969.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 345

 Score =  291 bits (745), Expect = 5e-95
 Identities = 135/212 (63%), Positives = 166/212 (78%)
 Frame = +1

Query: 1   FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
           FVTFIDD SRKLW Y +  KD+VL+ FKQFHA VER++G  LK +R+DN GEY GPF+ Y
Sbjct: 77  FVTFIDDCSRKLWVYALQRKDQVLERFKQFHALVERQSGKKLKPIRTDNDGEYCGPFDVY 136

Query: 181 CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
           C++HGI HE+T PKTPQ NGLA RMNRT+ ER+R MLS AKL K FWGE + TAV +IN 
Sbjct: 137 CKQHGIAHEKTPPKTPQLNGLAARMNRTLLERVRCMLSDAKLHKHFWGETLYTAVHVINL 196

Query: 361 SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
           +P   L+ EVP+ +W  K+ SY H++VFGC+AF HIP+DERSKLD K+R CI++GY  D+
Sbjct: 197 TPTVILNSEVPDKIWFGKNESYDHLRVFGCKAFVHIPRDERSKLDAKTRQCIFIGYGEDE 256

Query: 541 FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
           FG+R +DP  KK+ RSRDV FMEDQTIEDI K
Sbjct: 257 FGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDK 288


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  312 bits (799), Expect = 8e-95
 Identities = 147/223 (65%), Positives = 178/223 (79%), Gaps = 1/223 (0%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD+SRK+W +++ SKD+VLD FK+FHA VERETG  +K VRSDNGGEY GPFE Y
Sbjct: 487  FVTFIDDHSRKVWLHLLKSKDQVLDAFKEFHALVERETGRKIKCVRSDNGGEYRGPFETY 546

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            C++HGIR E+T PKTPQ NGLAERMNRTI ER+R +LSHAKLPK FWGEA+   VD++N 
Sbjct: 547  CKKHGIRLEKTPPKTPQLNGLAERMNRTIEERVRCVLSHAKLPKLFWGEAIMAVVDIVNL 606

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P+  L   +P+ VW+ K  SY H+KVFGCRAF HIPKDER+KLD K++ CIYL    D+
Sbjct: 607  TPSVPLGGAIPDEVWTGKRASYNHLKVFGCRAFVHIPKDERAKLDAKTKECIYLRSPKDE 666

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIK-KEKGQVKPSND 666
            FG+RLWDP  KKV RSRDVVF EDQTIEDIK  EK +++ S +
Sbjct: 667  FGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRLRKSTE 709


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  312 bits (799), Expect = 8e-95
 Identities = 147/223 (65%), Positives = 178/223 (79%), Gaps = 1/223 (0%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD+SRK+W +++ SKD+VLD FK+FHA VERETG  +K VRSDNGGEY GPFE Y
Sbjct: 487  FVTFIDDHSRKVWLHLLKSKDQVLDAFKEFHALVERETGRKIKCVRSDNGGEYRGPFETY 546

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            C++HGIR E+T PKTPQ NGLAERMNRTI ER+R +LSHAKLPK FWGEA+   VD++N 
Sbjct: 547  CKKHGIRLEKTPPKTPQLNGLAERMNRTIEERVRCVLSHAKLPKLFWGEAIMAVVDIVNL 606

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P+  L   +P+ VW+ K  SY H+KVFGCRAF HIPKDER+KLD K++ CIYL    D+
Sbjct: 607  TPSVPLGGAIPDEVWTGKRASYNHLKVFGCRAFVHIPKDERAKLDAKTKECIYLRSPKDE 666

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIK-KEKGQVKPSND 666
            FG+RLWDP  KKV RSRDVVF EDQTIEDIK  EK +++ S +
Sbjct: 667  FGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRLRKSTE 709


>gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 497

 Score =  290 bits (742), Expect = 1e-92
 Identities = 134/208 (64%), Positives = 166/208 (79%)
 Frame = +1

Query: 1   FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
           FVTFIDD SRKLW Y +S KD+VL+ FKQFHA VER++G  LK +R+DNGGEY GPF+ Y
Sbjct: 288 FVTFIDDCSRKLWVYALSRKDQVLEGFKQFHALVERQSGKKLKRIRTDNGGEYCGPFDVY 347

Query: 181 CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
           C++HGI H++T PKTPQ NGLAERMNRT+ ER+R MLS AKLPK FWGEA+ T V +IN 
Sbjct: 348 CKKHGIAHKKTPPKTPQLNGLAERMNRTLLERVRCMLSDAKLPKHFWGEALYTVVHVINL 407

Query: 361 SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
           +P   L+ EVPE +W  K+ SY H++VFGC+AF HIP+DERSKLD K+R CI++GY  D+
Sbjct: 408 TPTVILNSEVPEKIWFGKNASYDHLRVFGCKAFVHIPRDERSKLDTKTRQCIFIGYGEDE 467

Query: 541 FGFRLWDPEAKKVFRSRDVVFMEDQTIE 624
           F +R +DP  KK+ RSRDV FMEDQTI+
Sbjct: 468 FVYRFYDPVEKKLVRSRDVQFMEDQTIK 495


>gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 728

 Score =  296 bits (757), Expect = 2e-92
 Identities = 136/212 (64%), Positives = 167/212 (78%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD SRKLW Y+   KD+VL+ FKQFHA VER++G  LK + +DNGGEY GPF+ Y
Sbjct: 473  FVTFIDDCSRKLWVYVFQRKDQVLERFKQFHALVERQSGKKLKHIHTDNGGEYCGPFDVY 532

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            C++HGI HE+T PKTPQ NGL ERMNRT+ E +R MLS AKLPK FWGEA+ TAV +IN 
Sbjct: 533  CKQHGIAHEKTPPKTPQLNGLVERMNRTLLETVRCMLSDAKLPKHFWGEALYTAVHVINL 592

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P   L+ EVP+ +W  K+ SY H++VFGC+AF HIP+DERSKLD K+R CI++GY  D+
Sbjct: 593  TPTVILNSEVPDKIWFGKNASYDHLRVFGCKAFVHIPRDERSKLDAKTRQCIFIGYDEDE 652

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
            FG+R +DP  KK+ RSRDV FMEDQTIEDI K
Sbjct: 653  FGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDK 684


>gb|KYP45754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 427

 Score =  286 bits (731), Expect = 7e-92
 Identities = 132/212 (62%), Positives = 164/212 (77%)
 Frame = +1

Query: 1   FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
           FVTFIDD SRKLW Y +  KD+VL+ FKQFHA VER++G  LK + +DNGGEY GPF+ Y
Sbjct: 207 FVTFIDDCSRKLWVYALQRKDQVLERFKQFHALVERQSGKKLKHIHTDNGGEYCGPFDVY 266

Query: 181 CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
           C++HGI HE+T  KTPQ NGLAERMN+T+ ER+R MLS AKLPK FWGEA+ T V +IN 
Sbjct: 267 CKQHGIAHEKTPLKTPQLNGLAERMNKTLLERVRCMLSDAKLPKHFWGEALYTTVHVINL 326

Query: 361 SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
           +P   L+ EVP+ +W  K+ SY H++VF C+AF HIP+DERSKLD K+R CI++GY  D+
Sbjct: 327 TPTVILNSEVPDKIWFGKNASYDHLRVFSCKAFVHIPRDERSKLDAKTRQCIFIGYGEDE 386

Query: 541 FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
           FG+  +DP  KK+ RSRDV FME QTIEDI K
Sbjct: 387 FGYMFYDPVEKKIVRSRDVQFMEVQTIEDIDK 418


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  302 bits (773), Expect = 2e-91
 Identities = 130/212 (61%), Positives = 174/212 (82%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD+SRK+W Y + +KD+VLD FKQFHA VER++G  LK +R+DNGGEY+ PF++Y
Sbjct: 384  FVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSSPFDEY 443

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            CR+HGIRH++T PKTPQ NGLAERMNRT+ ER+R +LS ++LP++FWGEA+ T V ++N 
Sbjct: 444  CRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNL 503

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P   L+ +VP+ +WS   +SY H++VFGC+AF HIPKDERSKLD K+R C+++GY  D+
Sbjct: 504  TPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDE 563

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
             G+R +DP  KK+ RSRDVVFMED TI+DI+K
Sbjct: 564  LGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEK 595


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  303 bits (777), Expect = 2e-91
 Identities = 145/228 (63%), Positives = 174/228 (76%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDDYSRKLW Y +  K  VL  FK+FHA VER+TG  LK +R+DNGGEY GPF++Y
Sbjct: 499  FVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGKKLKCIRTDNGGEYCGPFDEY 558

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            CR +GIRH++T PK PQ NGLAERMNRTI ER+R ML  AKLP +FW EAV TAV +IN 
Sbjct: 559  CRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINL 618

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            SP  AL  EVP+ VW  K VSY H++VFGC+AF H+P+DERSKLD K+R CI++GY  D+
Sbjct: 619  SPVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIGYGFDE 678

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKKEKGQVKPSNDGGNVRD 684
            FG+RL+DP  KK+ RSRDVVF E+QTIEDI K K     S D G++ D
Sbjct: 679  FGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVK--QPESRDSGSLVD 724


>gb|KYP54197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 512

 Score =  287 bits (734), Expect = 3e-91
 Identities = 135/212 (63%), Positives = 164/212 (77%)
 Frame = +1

Query: 1   FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
           FVTFIDD SRKLW Y +  KD+VL+ FKQFHA VER++G  LK +R+DNG EY GPF+ Y
Sbjct: 157 FVTFIDDCSRKLWVYALQRKDQVLERFKQFHALVERQSGKKLKHIRTDNGSEYCGPFDVY 216

Query: 181 CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
           C++HGI HE+T PKTPQ NGL ERMNRT+ ER+R MLS AKLPK F GEA+ T V +IN 
Sbjct: 217 CKQHGIAHEKTPPKTPQLNGLVERMNRTLLERVRYMLSDAKLPKHFLGEALYTVVHVINL 276

Query: 361 SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
           +P   L+ EVPE +W  K+ SY H++VF C+AF HIP+DERSKLD K+R CI +GY  D+
Sbjct: 277 TPTVILNSEVPEKIWFGKNASYDHLRVFVCKAFVHIPRDERSKLDAKTRQCILIGYGEDE 336

Query: 541 FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
           FG+R +DP  KK+ RSRDV FMEDQTIEDI K
Sbjct: 337 FGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDK 368


>gb|PKI75267.1| hypothetical protein CRG98_004307 [Punica granatum]
          Length = 801

 Score =  292 bits (748), Expect = 2e-90
 Identities = 137/213 (64%), Positives = 175/213 (82%), Gaps = 1/213 (0%)
 Frame = +1

Query: 16  DDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCREHG 195
           DD+SRK+WAY + +KD+V + FK FH AVERETG+ LK VR++NGGEY GPFE YCR HG
Sbjct: 190 DDHSRKVWAYPMRTKDQVTEIFKNFHIAVERETGMKLKCVRANNGGEYRGPFENYCRTHG 249

Query: 196 IRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSPAYA 375
           I+ E+TV KTPQQNGLAERMN  I ER+R MLS AKL K+FWGEA+RTAVDLIN +P+ A
Sbjct: 250 IKLEKTVQKTPQQNGLAERMNCIIVERVRCMLSQAKLFKSFWGEAMRTAVDLINLTPSVA 309

Query: 376 LDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQFGFRL 555
           LD +VP+ VW+ K VSYKH++VFGC+A  HIP+DERSKLD K + CI+LG++ ++FG+R 
Sbjct: 310 LDGDVPQQVWTSKKVSYKHLRVFGCKASIHIPRDERSKLDAKVKQCIFLGFAHEEFGYRF 369

Query: 556 WDPEAKKVFRSRDVVFMEDQTIEDIKK-EKGQV 651
           WD ++KK+ +S +VVF EDQTIED++K EK +V
Sbjct: 370 WDLDSKKIIKSMNVVFFEDQTIEDLQKLEKTRV 402


>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
          Length = 1339

 Score =  298 bits (763), Expect = 1e-89
 Identities = 139/237 (58%), Positives = 177/237 (74%), Gaps = 2/237 (0%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDDYSRK WAY + +KD+VLD FK F A+VERETG  LK +R++NGGEY GPF+KY
Sbjct: 508  FVTFIDDYSRKTWAYTLKTKDQVLDTFKSFQASVERETGKKLKCIRTNNGGEYVGPFDKY 567

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            C++ GIRH+++ PKTPQ NGLAERMNRT+ ERMR +LS + LPK FWGEA+ T V L+N 
Sbjct: 568  CQDQGIRHQKSPPKTPQLNGLAERMNRTLVERMRCLLSQSMLPKYFWGEALNTVVHLLNL 627

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P   L  +VP  VW+ K VSY H++VFGC A+ HIPKDERSKLD KS+ C+++GY  D+
Sbjct: 628  TPCVPLKFDVPNHVWNGKEVSYDHLRVFGCMAYVHIPKDERSKLDEKSKKCVFVGYGLDE 687

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKKEKGQVKPSNDGG--NVRDDIIVPSP 705
            FG+R +DP  +K+ RSRDVVFMED TIEDI K + +     D    ++    I P+P
Sbjct: 688  FGYRFFDPVQRKLIRSRDVVFMEDYTIEDIDKVENKDPTFEDEEIVDIGSTTIAPTP 744


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score =  294 bits (752), Expect = 2e-89
 Identities = 132/233 (56%), Positives = 178/233 (76%)
 Frame = +1

Query: 1   FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
           FVTFIDD+SRK+W Y + +KD+VLD FKQFHA VER++G  LK ++ DNGGEY+ PF++Y
Sbjct: 255 FVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIQIDNGGEYSSPFDEY 314

Query: 181 CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
           CR+HGIRH++T PKTPQ NGLAE MNRT+ ER+R +LS ++LP++FWGEA+ T V L+N 
Sbjct: 315 CRQHGIRHQKTPPKTPQLNGLAESMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHLLNL 374

Query: 361 SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
           +P   L+ +VP+ +WS+  + Y H++VFGC+AF HIPKDE SKLD K+R C+++GY  D+
Sbjct: 375 TPCVPLEFDVPDRIWSNNEICYDHLRVFGCKAFVHIPKDEISKLDAKTRPCVFIGYGHDE 434

Query: 541 FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKKEKGQVKPSNDGGNVRDDIIVP 699
            G+R +DP  KK+ RSRDVVFMED TI+DI  EK     S   G++ D  + P
Sbjct: 435 LGYRFYDPMQKKLVRSRDVVFMEDHTIQDI--EKTNPMESQHSGDLIDLDLAP 485


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score =  296 bits (757), Expect = 6e-89
 Identities = 133/233 (57%), Positives = 180/233 (77%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD+SRK+W Y + +KD+VLD FKQFHA VER++G  LK +R+DNGGEY+GPF++Y
Sbjct: 452  FVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEY 511

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            CR+H IRH++T PKTPQ NGLAERMNRT+ ER+R +LS ++LP++FW EA+ T V ++N 
Sbjct: 512  CRQHDIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWDEALNTVVHVLNL 571

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P   L+ +V + +WS+  +SY H++VFGC+AF HIPKDERSKLD K+R C+++GY  D+
Sbjct: 572  TPCVPLEFDVSDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDVKTRPCVFIGYGQDE 631

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKKEKGQVKPSNDGGNVRDDIIVP 699
             G+R +DP  KK+ RSRDVVFMED TI+DI  EK     S   G++ D  + P
Sbjct: 632  LGYRFYDPVQKKLVRSRDVVFMEDHTIQDI--EKTNPMESQHSGDLIDLDLAP 682


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  296 bits (757), Expect = 8e-89
 Identities = 127/212 (59%), Positives = 173/212 (81%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD+SRK+W Y + +KD+VLD FKQFHA VER++G  LK +R+DNGGEY+GPF++Y
Sbjct: 481  FVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEY 540

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            CR+HG RH++T PKTPQ NGLAERMNRT+ ER+R +LS ++LP++FWGEA+ T V ++N 
Sbjct: 541  CRQHGFRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNL 600

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P   L+ +VP+ +WS+  +SY H++VFGC+AF HIPKDERSKLD K+R C+++GY  D+
Sbjct: 601  TPCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDE 660

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
             G++ +D   KK+ RS DVVFMED TI+DI+K
Sbjct: 661  LGYKFYDLVQKKLXRSXDVVFMEDHTIQDIEK 692


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  294 bits (752), Expect = 3e-88
 Identities = 141/244 (57%), Positives = 177/244 (72%), Gaps = 1/244 (0%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTG-PFEK 177
            FVTFIDD SRKLW Y++ +KD+V   F++FHA VERETG  LK +RSDNGGEYT   FE+
Sbjct: 503  FVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEE 562

Query: 178  YCREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLIN 357
            YC  HGIRHE+TVP TPQ NG+AERMNRTI E++RSML  AKLPK+FWGEAV+TA  LIN
Sbjct: 563  YCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLIN 622

Query: 358  HSPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPD 537
             SP+  L  E+PE VW++K VSY H+KVFGCRAFAH+PK++R+KLD KS  CI++GY  +
Sbjct: 623  RSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDE 682

Query: 538  QFGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKKEKGQVKPSNDGGNVRDDIIVPSPGEGQ 717
            +FG+RLWDP  KKV RSRDVVF E +      +    +      G + + + +PS     
Sbjct: 683  EFGYRLWDPVKKKVIRSRDVVFRESEV-----RTAADMSEKVKNGIIPNFVTIPSTSNNP 737

Query: 718  VQAD 729
              A+
Sbjct: 738  TSAE 741


>gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 990

 Score =  290 bits (741), Expect = 5e-88
 Identities = 136/212 (64%), Positives = 167/212 (78%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGPFEKY 180
            FVTFIDD S+KLW Y +  KD VL+ FKQFHA VER++G  LK +R+DNGGEY GPF+ Y
Sbjct: 414  FVTFIDDCSKKLWVYALQRKD-VLERFKQFHALVERQSGKKLKRIRTDNGGEYCGPFDVY 472

Query: 181  CREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLINH 360
            C++HGI HE+T PKTPQ N LAERMN T+ ER+R MLS AKLPK FWGEA+ TAV +IN 
Sbjct: 473  CKQHGIAHEKTPPKTPQLNDLAERMNMTLLERVRCMLSDAKLPKHFWGEALYTAVHVINL 532

Query: 361  SPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPDQ 540
            +P   L+ EVP+ +W  K+ SY H++VFGC+AF HIP+DERSKLD K+R CI++GY  D+
Sbjct: 533  TPTVILNSEVPDKIWFGKNASYDHLRVFGCKAFVHIPRDERSKLDTKTRQCIFIGYGEDE 592

Query: 541  FGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK 636
            FG+R +DP  KK+ RSRDV FMEDQTIEDI K
Sbjct: 593  FGYRFYDPIEKKLVRSRDVQFMEDQTIEDIDK 624


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  293 bits (749), Expect = 9e-88
 Identities = 135/226 (59%), Positives = 173/226 (76%), Gaps = 1/226 (0%)
 Frame = +1

Query: 1    FVTFIDDYSRKLWAYMISSKDKVLDCFKQFHAAVERETGLSLKAVRSDNGGEYTGP-FEK 177
            FVTFIDD SRK W Y++ +K +V  CF+QFHA VERETG  LK +R+DNGGEY    F+ 
Sbjct: 496  FVTFIDDASRKTWVYLLQAKSQVFQCFQQFHAMVERETGKQLKCIRTDNGGEYISKEFKD 555

Query: 178  YCREHGIRHERTVPKTPQQNGLAERMNRTICERMRSMLSHAKLPKTFWGEAVRTAVDLIN 357
            YC ++GIRHE+TVP TPQ NG+AERMNRTI E++R ML  AKLPK FWGEAV+TAV LIN
Sbjct: 556  YCSKYGIRHEKTVPGTPQHNGIAERMNRTIVEKVRCMLRMAKLPKPFWGEAVQTAVYLIN 615

Query: 358  HSPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAFAHIPKDERSKLDGKSRSCIYLGYSPD 537
              P+  L  ++PE VW+ K VSY H+KVFGC+AF H+PK++RSKLD K+  C+++GY  +
Sbjct: 616  RLPSVPLGFDIPERVWAGKEVSYSHLKVFGCKAFMHVPKEQRSKLDDKAIPCVFVGYGNE 675

Query: 538  QFGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKKEKGQVKPSNDGGN 675
            +FG++LWDPE K++ RSRDV+F E +TIED+K  +   KP  DG N
Sbjct: 676  EFGYKLWDPERKRIVRSRDVIFHEHETIEDLKGGEA-AKPMEDGVN 720


>gb|PKI59578.1| hypothetical protein CRG98_019987 [Punica granatum]
          Length = 298

 Score =  270 bits (689), Expect = 3e-87
 Identities = 126/185 (68%), Positives = 155/185 (83%), Gaps = 1/185 (0%)
 Frame = +1

Query: 100 VERETGLSLKAVRSDNGGEYTGPFEKYCREHGIRHERTVPKTPQQNGLAERMNRTICERM 279
           +ERETG+ LK VR+DNGGEY GPFE YCR HGI+ E+TV KTPQQNGLAERMNRTI E +
Sbjct: 1   MERETGMKLKCVRADNGGEYRGPFENYCRTHGIKLEKTVRKTPQQNGLAERMNRTIVEIV 60

Query: 280 RSMLSHAKLPKTFWGEAVRTAVDLINHSPAYALDLEVPEWVWSDKSVSYKHVKVFGCRAF 459
           R MLS AKL K+FWGEA+RT VDLIN +P   LD +VP+ VW+DK VSYKH++VFG RAF
Sbjct: 61  RCMLSQAKLSKSFWGEAMRTTVDLINLTPLVTLDGDVPQQVWTDKEVSYKHLRVFGWRAF 120

Query: 460 AHIPKDERSKLDGKSRSCIYLGYSPDQFGFRLWDPEAKKVFRSRDVVFMEDQTIEDIKK- 636
            HIP+DERSKLD K++ CI+LGY+ ++FG+R WDP++KK+ R+RDVVF EDQTIED++K 
Sbjct: 121 VHIPRDERSKLDAKAKQCIFLGYAHEEFGYRFWDPDSKKIIRNRDVVFFEDQTIEDLQKL 180

Query: 637 EKGQV 651
           EK +V
Sbjct: 181 EKTRV 185