BLASTX nr result
ID: Ophiopogon24_contig00008246
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00008246
(947 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP48154.1| Retrovirus-related Pol polyprotein from transposo... 97 4e-20
gb|AAP54013.1| retrotransposon protein, putative, Ty1-copia subc... 95 4e-20
gb|KYP66080.1| Retrovirus-related Pol polyprotein from transposo... 98 7e-20
gb|KYP50827.1| Retrovirus-related Pol polyprotein from transposo... 94 2e-19
ref|XP_023909330.1| equilibrative nucleotide transporter 3-like ... 98 5e-19
gb|KYP73871.1| Retrovirus-related Pol polyprotein from transposo... 96 5e-19
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 99 5e-19
gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposo... 97 1e-18
gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subc... 97 1e-18
gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposo... 97 2e-18
gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposo... 97 2e-18
gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposo... 97 2e-18
gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subc... 96 3e-18
emb|CAE01581.2| OSJNBa0068L06.7 [Oryza sativa Japonica Group] 96 4e-18
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc... 96 4e-18
gb|AAS01934.1| putative Integrase core domain containing protein... 96 4e-18
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc... 96 4e-18
gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group] 96 4e-18
gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc... 96 4e-18
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 96 4e-18
>gb|KYP48154.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 223
Score = 97.1 bits (240), Expect = 4e-20
Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TEAEWL++ ++ +PL KP P +S+H D++S I + K N K NRHIQLR+ V++
Sbjct: 117 TSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKQ 175
Query: 183 LL-GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL + +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 176 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 217
>gb|AAP54013.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 144
Score = 94.7 bits (234), Expect = 4e-20
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 8/117 (6%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 14 EAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHVKRRLKSVRKLRN 73
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP-------*MRSLTVGTQL 338
V+ LD++++ +NLADP TKGLS+++I ++S+EMGL P SLTVG L
Sbjct: 74 SGVITLDYIQTARNLADPFTKGLSRNMIDNASKEMGLRPIAFLKELTFVSLTVGRSL 130
>gb|KYP66080.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 316
Score = 98.2 bits (243), Expect = 7e-20
Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TEAEWL++ V+ +PL KP P +S+H D++S I + K N K NRHIQLR+ V++
Sbjct: 204 TSTEAEWLRNFVANIPLEMKPTPSVSIHYDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKQ 262
Query: 183 LL-GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL + +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 263 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 304
>gb|KYP50827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 188
Score = 94.4 bits (233), Expect = 2e-19
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TE EWL++ ++ +PL KP P +S+H D+ S I + K N K NRHIQLR+ V++
Sbjct: 76 TSTETEWLRNFLANIPLGMKPTPSMSIHCDNHSAIAIAKNKSYNGK-NRHIQLRHNIVKQ 134
Query: 183 LLGKVVI-LDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL I +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 135 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 176
>ref|XP_023909330.1| equilibrative nucleotide transporter 3-like [Quercus suber]
Length = 545
Score = 98.2 bits (243), Expect = 5e-19
Identities = 50/100 (50%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +3
Query: 9 TEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLL 188
TEAEWL++L++++P KP+P ISLH DS++ I + N K RHI LR+ V++L+
Sbjct: 445 TEAEWLRNLLADIPKWDKPLPSISLHCDSQAAIACARNKIYNGK-KRHIHLRHNIVRQLI 503
Query: 189 GK-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ ++ V+SEKNLADPLTKGL++ + D+SREMGL P
Sbjct: 504 SNGVIAMELVRSEKNLADPLTKGLTRQSVYDTSREMGLKP 543
>gb|KYP73871.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 314
Score = 95.9 bits (237), Expect = 5e-19
Identities = 47/100 (47%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T +E +LK+L+ +LPL+ KP+PPIS+H DS+ I + + N+K RH+++R+KS++
Sbjct: 212 TSSETGFLKNLLYDLPLLNKPIPPISMHCDSQVAIAKVTSKNFNEK-RRHLRIRHKSIRN 270
Query: 183 LLGKVVI-LDFVKSEKNLADPLTKGLSKSVILDSSREMGL 299
L+ +I +DF++ + NLADPLTKGL++ +L+SSREMGL
Sbjct: 271 LITHCIISVDFIRFKSNLADPLTKGLTRQQVLESSREMGL 310
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 98.6 bits (244), Expect = 5e-19
Identities = 53/110 (48%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Frame = +3
Query: 9 TEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLL 188
+EAEWLK+ ++ +PL KP P +S+H D +S I + K N K NRHIQLR+ V++LL
Sbjct: 1180 SEAEWLKNFLANIPLGMKPTPSVSMHCDCQSAIAIAKNKSYNGK-NRHIQLRHNLVKQLL 1238
Query: 189 GKVVI-LDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP*MRSLTVGTQ 335
I +D+VKSE++LADPLTK L + +IL++SR MGL P + TQ
Sbjct: 1239 KSGTISIDYVKSERDLADPLTKPLGRKMILETSRGMGLKPLANKQEMETQ 1288
>gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 655
Score = 97.4 bits (241), Expect = 1e-18
Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TEAEWL++ ++ +PL KP P +S+H D++S I + K N K NRHIQLR+ V++
Sbjct: 546 TSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKK 604
Query: 183 LL-GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL + +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 605 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 646
>gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1166
Score = 97.4 bits (241), Expect = 1e-18
Identities = 48/99 (48%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 1067 EAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVDSSKDNMKSSRHVKKRLKSVRKLRN 1126
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ +NLADP TKGLS++VI ++S+EMGLSP
Sbjct: 1127 SGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLSP 1165
>gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1012
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TEAEWL++ ++ +PL KP P +S+H D++S I + K N K NRHIQLR+ V++
Sbjct: 900 TSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKQ 958
Query: 183 LL-GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL + +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 959 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 1000
>gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1215
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TEAEWL++ ++ +PL KP P +S+H D++S I + K N K NRHIQLR+ V++
Sbjct: 1103 TSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKQ 1161
Query: 183 LL-GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL + +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 1162 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 1203
>gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 900
Score = 96.7 bits (239), Expect = 2e-18
Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 TCTEAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQR 182
T TEAEWL++ + +PL KP P +S+H D++S I + K N K NRHIQLR+ V++
Sbjct: 788 TSTEAEWLRNFLENIPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKQ 846
Query: 183 LL-GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
LL + +++VKSE NLADPLTK L + +I ++SR MGL P
Sbjct: 847 LLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKP 888
>gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 591
Score = 95.9 bits (237), Expect = 3e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLL- 188
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 492 EAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLKN 551
Query: 189 GKVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
+V+ LD++++ +NLADP TKGLS++VI +S+EMGL P
Sbjct: 552 SRVITLDYIQTARNLADPFTKGLSRTVIDKASKEMGLRP 590
>emb|CAE01581.2| OSJNBa0068L06.7 [Oryza sativa Japonica Group]
Length = 873
Score = 95.9 bits (237), Expect = 4e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEW++DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 774 EAEWMRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSYKDNMKSSRHVKRRLKSVRKLRN 833
Query: 192 -KVVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ KNLADP TKGLS++VI ++S+EMGL P
Sbjct: 834 FGVITLDYIQTAKNLADPFTKGLSRNVIDNASKEMGLRP 872
>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1095
Score = 95.9 bits (237), Expect = 4e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 996 EAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRN 1055
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ +NLADP TKGLS++VI ++S+EMGL P
Sbjct: 1056 SGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1094
>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
Japonica Group]
Length = 1180
Score = 95.9 bits (237), Expect = 4e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 1081 EAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRN 1140
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ +NLADP TKGLS++VI ++S+EMGL P
Sbjct: 1141 SGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1179
>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 95.9 bits (237), Expect = 4e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 1098 EAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRN 1157
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ +NLADP TKGLS++VI ++S+EMGL P
Sbjct: 1158 SGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1196
>gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1256
Score = 95.9 bits (237), Expect = 4e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 1157 EAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRN 1216
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ +NLADP TKGLS++VI ++S+EMGL P
Sbjct: 1217 SGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1255
>gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 95.9 bits (237), Expect = 4e-18
Identities = 47/99 (47%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 1098 EAEWLRDLLMDLPIVEKPVPAIVMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRN 1157
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP 305
V+ LD++++ +NLADP TKGLS++VI ++S+EMGL P
Sbjct: 1158 SGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1196
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 95.9 bits (237), Expect = 4e-18
Identities = 53/117 (45%), Positives = 79/117 (67%), Gaps = 8/117 (6%)
Frame = +3
Query: 12 EAEWLKDLVSELPLVCKPVPPISLHSDSRSTIELLKQVHVNKKLNRHIQLRYKSVQRLLG 191
EAEWL+DL+ +LP+V KPVP I ++ D+++ I + N K +RH++ R KSV++L
Sbjct: 1203 EAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRN 1262
Query: 192 K-VVILDFVKSEKNLADPLTKGLSKSVILDSSREMGLSP-------*MRSLTVGTQL 338
V+ LD++++ +NLADP TKGLS++VI ++S+EMGL P SLTVG L
Sbjct: 1263 SGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIAFLKELTFVSLTVGRSL 1319