BLASTX nr result

ID: Ophiopogon24_contig00008210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00008210
         (513 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246285.1| uncharacterized protein LOC109824165 [Aspara...    87   2e-22
gb|ONK57572.1| uncharacterized protein A4U43_C09F1870 [Asparagus...    75   6e-19

>ref|XP_020246285.1| uncharacterized protein LOC109824165 [Asparagus officinalis]
          Length = 592

 Score = 87.4 bits (215), Expect(2) = 2e-22
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
 Frame = -2

Query: 338 LDGGKIEGSTTLESKFEENEITALPRVAKQE-LIAKNFTELSVTNVADQVLWDHNKSVES 162
           LDG KIEGS T +  F++ E   +  VA QE L A+N      TN ADQV +  N  V+ 
Sbjct: 366 LDGTKIEGSATRDCTFDQTETITMATVANQEELNARN-----CTNFADQVFFKENSGVK- 419

Query: 161 RSVGNELEDSKFRETVTAQHALVSPDAGAARDSSTAMQEESIVSRDEIIAPEE 3
           RS+ NE E S ++   TAQ + VS D GA RD+ TAM +ESI ++DE++AP+E
Sbjct: 420 RSIENEFEYSTYQGIFTAQQSSVSLDTGAFRDTGTAMHDESIGNKDELMAPDE 472



 Score = 46.2 bits (108), Expect(2) = 2e-22
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
 Frame = -3

Query: 511 MKALSVSESSVAKIEEAGPYECGMS--SENFSGGSTKPCEGVDSQAT 377
           MKA++VS +S A+ EEA  YEC MS  +ENF  GS KPC  +DS+AT
Sbjct: 288 MKAVAVSGNSDAEKEEA--YECEMSPEAENFLSGSNKPCAEMDSEAT 332


>gb|ONK57572.1| uncharacterized protein A4U43_C09F1870 [Asparagus officinalis]
          Length = 410

 Score = 75.5 bits (184), Expect(2) = 6e-19
 Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -2

Query: 338 LDGGKIEGSTTLESKFEENEITALPRVAKQE-LIAKNFTELSVTNVADQVLWDHNKSVES 162
           LDG KIEGS T +  F++ E   +  VA QE L A+N      TN ADQV +  N  V+ 
Sbjct: 297 LDGTKIEGSATRDCTFDQTETITMATVANQEELNARN-----CTNFADQVFFKENSGVK- 350

Query: 161 RSVGNELEDSKFRETVTAQHALVSPDAGAARDSSTAMQEESIVS 30
           RS+ NE E S ++   TAQ + VS D GA RD+ TAM +ESI S
Sbjct: 351 RSIENEFEYSTYQGIFTAQQSSVSLDTGAFRDTGTAMHDESIGS 394



 Score = 46.2 bits (108), Expect(2) = 6e-19
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
 Frame = -3

Query: 511 MKALSVSESSVAKIEEAGPYECGMS--SENFSGGSTKPCEGVDSQAT 377
           MKA++VS +S A+ EEA  YEC MS  +ENF  GS KPC  +DS+AT
Sbjct: 219 MKAVAVSGNSDAEKEEA--YECEMSPEAENFLSGSNKPCAEMDSEAT 263


Top