BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00008110
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243888.1| probable mediator of RNA polymerase II trans...    81   3e-15
gb|ONK78511.1| uncharacterized protein A4U43_C02F19550 [Asparagu...    55   3e-06
ref|XP_020254278.1| probable mediator of RNA polymerase II trans...    55   4e-06

>ref|XP_020243888.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Asparagus officinalis]
 gb|ONK61485.1| uncharacterized protein A4U43_C08F30400 [Asparagus officinalis]
          Length = 486

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 41/114 (35%), Positives = 60/114 (52%)
 Frame = +1

Query: 1   LQKDSNLMRKSNGEVRRQDQQKDCNLVRKGNGELRSQEVPKARRPTDATHXXXXXXXXXX 180
           + +D N+    + +  R+ ++K  NL +K N E+RSQE+P   +PT  T           
Sbjct: 269 MDEDGNITSNGDKKNGRKPREKSNNLTKKDNTEIRSQEIPGVPKPTYTTLKASKSKDIPS 328

Query: 181 XXXXERPSAKATACRNTEQRQKMQDNSGDLRRQEVAPRAPKPINTPRMASNPQD 342
               +R S K T C+N EQRQ+  ++S D+RRQE  PR P P +     S PQD
Sbjct: 329 PLIPKRSSPKDTTCKNIEQRQRTHEHSRDIRRQETGPRTPNPSDVVCKTSKPQD 382


>gb|ONK78511.1| uncharacterized protein A4U43_C02F19550 [Asparagus officinalis]
          Length = 468

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%)
 Frame = +1

Query: 79  VRKGNGELRSQEVPKARRPTDATHXXXXXXXXXXXXXXERPSAKATACRNTEQRQKMQDN 258
           V+K N E+  QEVPKA +PTD TH              + P +++    NT++RQK Q++
Sbjct: 291 VKKDNVEVTRQEVPKASKPTDTTHKAPKNKED------KHPVSES----NTQRRQKSQEH 340

Query: 259 SGDLRRQEVAPRAPKPINTPRMASNPQD 342
           S + R QE   R  KPI+     S P +
Sbjct: 341 SREFRNQEAGFRVSKPIDASHKTSKPSE 368


>ref|XP_020254278.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Asparagus officinalis]
          Length = 770

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%)
 Frame = +1

Query: 79  VRKGNGELRSQEVPKARRPTDATHXXXXXXXXXXXXXXERPSAKATACRNTEQRQKMQDN 258
           V+K N E+  QEVPKA +PTD TH              + P +++    NT++RQK Q++
Sbjct: 291 VKKDNVEVTRQEVPKASKPTDTTHKAPKNKED------KHPVSES----NTQRRQKSQEH 340

Query: 259 SGDLRRQEVAPRAPKPINTPRMASNPQD 342
           S + R QE   R  KPI+     S P +
Sbjct: 341 SREFRNQEAGFRVSKPIDASHKTSKPSE 368



 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%)
 Frame = +1

Query: 79  VRKGNGELRSQEVPKARRPTDATHXXXXXXXXXXXXXXERPSAKATACRNTEQRQKMQDN 258
           V+K N E+  QEVPKA +PTD TH              + P +++    NT++RQK Q++
Sbjct: 593 VKKDNVEVTRQEVPKASKPTDTTHKAPKNKED------KHPVSES----NTQRRQKSQEH 642

Query: 259 SGDLRRQEVAPRAPKPINTPRMASNPQD 342
           S + R QE   R  KPI+     S P +
Sbjct: 643 SREFRNQEAGFRVSKPIDASHKTSKPSE 670