BLASTX nr result
ID: Ophiopogon24_contig00007853
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00007853
(1060 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020267167.1| nuclear poly(A) polymerase 3 isoform X2 [Asp... 79 2e-12
ref|XP_020267166.1| nuclear poly(A) polymerase 3 isoform X1 [Asp... 79 2e-12
ref|XP_010921412.2| PREDICTED: nuclear poly(A) polymerase 3-like... 66 3e-09
ref|XP_010921414.2| PREDICTED: nuclear poly(A) polymerase 3-like... 66 3e-09
ref|XP_008793349.1| PREDICTED: nuclear poly(A) polymerase 3 [Pho... 64 7e-08
ref|XP_010938209.1| PREDICTED: nuclear poly(A) polymerase 3-like... 64 1e-07
ref|XP_019710447.1| PREDICTED: nuclear poly(A) polymerase 3-like... 64 1e-07
ref|XP_010938210.1| PREDICTED: nuclear poly(A) polymerase 3-like... 64 1e-07
ref|XP_020599021.1| nuclear poly(A) polymerase 3 [Phalaenopsis e... 59 6e-06
gb|OAY81738.1| Nuclear poly(A) polymerase 3 [Ananas comosus] 53 8e-06
ref|XP_020691564.1| nuclear poly(A) polymerase 3 isoform X3 [Den... 59 1e-05
>ref|XP_020267167.1| nuclear poly(A) polymerase 3 isoform X2 [Asparagus officinalis]
Length = 435
Score = 79.0 bits (193), Expect = 2e-12
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNLAVT 890
GLS NGS+++DV +REDFM+SVNKD YSDTS+ LELSVVES QLPKNL+LA T
Sbjct: 379 GLSTNGSNYIDVYSIREDFMKSVNKDIYSDTSSKNYKLELSVVESSQLPKNLDLADT 435
>ref|XP_020267166.1| nuclear poly(A) polymerase 3 isoform X1 [Asparagus officinalis]
gb|ONK67625.1| uncharacterized protein A4U43_C05F2020 [Asparagus officinalis]
Length = 462
Score = 79.0 bits (193), Expect = 2e-12
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNLAVT 890
GLS NGS+++DV +REDFM+SVNKD YSDTS+ LELSVVES QLPKNL+LA T
Sbjct: 406 GLSTNGSNYIDVYSIREDFMKSVNKDIYSDTSSKNYKLELSVVESSQLPKNLDLADT 462
>ref|XP_010921412.2| PREDICTED: nuclear poly(A) polymerase 3-like isoform X1 [Elaeis
guineensis]
Length = 577
Score = 66.2 bits (160), Expect(2) = 3e-09
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNL-AVT*G 884
GL PN + F+D D V+EDFM SV KD Y+D S+ C LELS+VES QLPK++ + +
Sbjct: 477 GLLPNETIFMDTDSVKEDFMNSVYKDLYADKSSR-CKLELSIVESAQLPKHVQIGSGGTK 535
Query: 883 GGAACWR 863
G ACWR
Sbjct: 536 GSKACWR 542
Score = 25.0 bits (53), Expect(2) = 3e-09
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSS 780
KP+ S PHYFVG+ +S
Sbjct: 551 KPVYSQYLPHYFVGYVAS 568
>ref|XP_010921414.2| PREDICTED: nuclear poly(A) polymerase 3-like isoform X2 [Elaeis
guineensis]
Length = 562
Score = 66.2 bits (160), Expect(2) = 3e-09
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNL-AVT*G 884
GL PN + F+D D V+EDFM SV KD Y+D S+ C LELS+VES QLPK++ + +
Sbjct: 462 GLLPNETIFMDTDSVKEDFMNSVYKDLYADKSSR-CKLELSIVESAQLPKHVQIGSGGTK 520
Query: 883 GGAACWR 863
G ACWR
Sbjct: 521 GSKACWR 527
Score = 25.0 bits (53), Expect(2) = 3e-09
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSS 780
KP+ S PHYFVG+ +S
Sbjct: 536 KPVYSQYLPHYFVGYVAS 553
>ref|XP_008793349.1| PREDICTED: nuclear poly(A) polymerase 3 [Phoenix dactylifera]
Length = 574
Score = 63.9 bits (154), Expect(2) = 7e-08
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNL-AVT*G 884
GL PN + F+D D V+EDFMRSVNKD D S C LELS+VES QLPK + + +
Sbjct: 469 GLLPNETVFIDADSVKEDFMRSVNKDLDGDKSTR-CKLELSIVESMQLPKCVQIDSGGSK 527
Query: 883 GGAACWR 863
G CWR
Sbjct: 528 GSKTCWR 534
Score = 22.3 bits (46), Expect(2) = 7e-08
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSSGCIHQRHG 756
KP+ S P YFVG+ +S +Q G
Sbjct: 543 KPVYSQHLPQYFVGYAASDRGYQSCG 568
>ref|XP_010938209.1| PREDICTED: nuclear poly(A) polymerase 3-like isoform X1 [Elaeis
guineensis]
Length = 571
Score = 63.5 bits (153), Expect(2) = 1e-07
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPK--NLNLAVT* 887
GL PN + F+D D V+EDF++SVNKD Y D S C LELS+V+S QLPK ++ VT
Sbjct: 471 GLLPNETIFMDTDSVKEDFIKSVNKDIYGDKSTR-CKLELSIVKSTQLPKCVQIDSRVT- 528
Query: 886 GGGAACWR 863
ACWR
Sbjct: 529 KRSKACWR 536
Score = 21.9 bits (45), Expect(2) = 1e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSS 780
KP+ S P YFVG+ +S
Sbjct: 545 KPVYSQYLPQYFVGYVAS 562
>ref|XP_019710447.1| PREDICTED: nuclear poly(A) polymerase 3-like isoform X2 [Elaeis
guineensis]
Length = 534
Score = 63.5 bits (153), Expect(2) = 1e-07
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPK--NLNLAVT* 887
GL PN + F+D D V+EDF++SVNKD Y D S C LELS+V+S QLPK ++ VT
Sbjct: 434 GLLPNETIFMDTDSVKEDFIKSVNKDIYGDKSTR-CKLELSIVKSTQLPKCVQIDSRVT- 491
Query: 886 GGGAACWR 863
ACWR
Sbjct: 492 KRSKACWR 499
Score = 21.9 bits (45), Expect(2) = 1e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSS 780
KP+ S P YFVG+ +S
Sbjct: 508 KPVYSQYLPQYFVGYVAS 525
>ref|XP_010938210.1| PREDICTED: nuclear poly(A) polymerase 3-like isoform X3 [Elaeis
guineensis]
Length = 516
Score = 63.5 bits (153), Expect(2) = 1e-07
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPK--NLNLAVT* 887
GL PN + F+D D V+EDF++SVNKD Y D S C LELS+V+S QLPK ++ VT
Sbjct: 416 GLLPNETIFMDTDSVKEDFIKSVNKDIYGDKSTR-CKLELSIVKSTQLPKCVQIDSRVT- 473
Query: 886 GGGAACWR 863
ACWR
Sbjct: 474 KRSKACWR 481
Score = 21.9 bits (45), Expect(2) = 1e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSS 780
KP+ S P YFVG+ +S
Sbjct: 490 KPVYSQYLPQYFVGYVAS 507
>ref|XP_020599021.1| nuclear poly(A) polymerase 3 [Phalaenopsis equestris]
Length = 561
Score = 59.3 bits (142), Expect = 6e-06
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNL-AVT*G 884
GL+ G D++ V+E+FMR+++KD++S + N C LELS++ + QLP ++ + + +
Sbjct: 459 GLTRLGRGSADLNSVKEEFMRTISKDDHSGSKNTNCKLELSILHASQLPNDVEIDSGSEK 518
Query: 883 GGAACWRKFRFQSANEKNPSALDVTHTILWVSAAADAFTRDMG 755
G ACWR + + + K + V + + A+ D + +G
Sbjct: 519 GTKACWRFMDYYNQHRKPAYSQYVPNYFVGYVASCDDYRSPIG 561
>gb|OAY81738.1| Nuclear poly(A) polymerase 3 [Ananas comosus]
Length = 580
Score = 52.8 bits (125), Expect(2) = 8e-06
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNLAVT*GG 881
GLS +F++++ V+EDFMRS+N ++YS+ + L+LS+V+S +LPK++ GG
Sbjct: 482 GLSIKRGTFININSVKEDFMRSLNNEHYSEERVSRYKLKLSLVDSFRLPKSMRSVS--GG 539
Query: 880 GAACWRKF 857
AC R F
Sbjct: 540 CKACQRIF 547
Score = 26.6 bits (57), Expect(2) = 8e-06
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 833 KPICS*CHPHYFVGFCSS 780
KP+ S C PHY VG+ ++
Sbjct: 554 KPVYSQCWPHYLVGYAAT 571
>ref|XP_020691564.1| nuclear poly(A) polymerase 3 isoform X3 [Dendrobium catenatum]
Length = 472
Score = 58.5 bits (140), Expect = 1e-05
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 1060 GLSPNGSSFVDVDFVREDFMRSVNKDNYSDTSNNLCNLELSVVESDQLPKNLNLAV-T*G 884
GLS G + D+ ++E+FM+S+NK+ +S N C LELS++++ QLPK+L+L +
Sbjct: 370 GLSSLGRAGFDLSSIKEEFMKSINKEEHSGYQNTKCKLELSILQTSQLPKDLDLNYGSEK 429
Query: 883 GGAACWRKFRFQSANEK 833
ACWR + + + K
Sbjct: 430 RTKACWRIMDYYNQHRK 446