BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00007750
         (378 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus...    54   9e-06
ref|XP_020273292.1| probable RNA polymerase II transcription fac...    54   9e-06

>gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
          Length = 596

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 28/33 (84%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
 Frame = +2

Query: 281 LLDHGILRDGTEEVVDAD-ELSKRSIVQDLNRH 376
           L DHGILRDGT+EVVD D ELSKRSI QDLNRH
Sbjct: 298 LPDHGILRDGTKEVVDTDNELSKRSISQDLNRH 330


>ref|XP_020273292.1| probable RNA polymerase II transcription factor B subunit 1-1
           [Asparagus officinalis]
          Length = 605

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 28/33 (84%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
 Frame = +2

Query: 281 LLDHGILRDGTEEVVDAD-ELSKRSIVQDLNRH 376
           L DHGILRDGT+EVVD D ELSKRSI QDLNRH
Sbjct: 307 LPDHGILRDGTKEVVDTDNELSKRSISQDLNRH 339