BLASTX nr result
ID: Ophiopogon24_contig00007728
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00007728
(766 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020273292.1| probable RNA polymerase II transcription fac... 91 5e-50
gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus... 91 5e-50
gb|OAY75981.1| putative RNA polymerase II transcription factor B... 65 7e-36
gb|OAY75989.1| putative RNA polymerase II transcription factor B... 65 7e-36
ref|XP_020103739.1| probable RNA polymerase II transcription fac... 65 7e-35
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 69 5e-27
ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transc... 69 5e-27
ref|XP_022731032.1| probable RNA polymerase II transcription fac... 63 7e-27
ref|XP_022731033.1| probable RNA polymerase II transcription fac... 63 7e-27
ref|XP_022731034.1| probable RNA polymerase II transcription fac... 63 7e-27
ref|XP_008789680.1| PREDICTED: probable RNA polymerase II transc... 114 2e-25
ref|XP_008789678.1| PREDICTED: probable RNA polymerase II transc... 114 2e-25
ref|XP_008789679.1| PREDICTED: probable RNA polymerase II transc... 111 3e-24
ref|XP_019704306.1| PREDICTED: probable RNA polymerase II transc... 105 2e-22
ref|XP_010913640.1| PREDICTED: probable RNA polymerase II transc... 105 3e-22
ref|XP_010913639.1| PREDICTED: probable RNA polymerase II transc... 105 4e-22
ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transc... 105 4e-22
ref|XP_017700274.1| PREDICTED: probable RNA polymerase II transc... 105 5e-22
gb|OVA05707.1| BSD [Macleaya cordata] 102 6e-21
ref|XP_022886540.1| probable RNA polymerase II transcription fac... 70 3e-20
>ref|XP_020273292.1| probable RNA polymerase II transcription factor B subunit 1-1
[Asparagus officinalis]
Length = 605
Score = 90.9 bits (224), Expect(4) = 5e-50
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = -3
Query: 410 HYTXDCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIA 231
H DCQ ANALK+LGDSGAGIKP DCSL+ EAY+ LAEQIS VK +GL+DPVVQPEIA
Sbjct: 413 HEYFDCQLANALKALGDSGAGIKP-DCSLNAEEAYVYLAEQISEVKFRGLNDPVVQPEIA 471
Query: 230 LK 225
LK
Sbjct: 472 LK 473
Score = 66.6 bits (161), Expect(4) = 5e-50
Identities = 41/70 (58%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E EDLAIFLK DDI+ANEARRK DHGILRDGT+EVVD D
Sbjct: 265 EDEDLAIFLKQDDILANEARRKMRRVDPTLDMEADLGDDYLHLPDHGILRDGTKEVVDTD 324
Query: 650 -ELSKRSIAQ 624
ELSKRSI+Q
Sbjct: 325 NELSKRSISQ 334
Score = 62.8 bits (151), Expect(4) = 5e-50
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = -2
Query: 540 LLKHLQAESTETSDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
L + QAES ETSDEN LE ERV RMTEIEDLQGP++ PYAPL
Sbjct: 363 LARSRQAESNETSDENEDLERLERVSRMTEIEDLQGPQNLPYAPL 407
Score = 48.1 bits (113), Expect(4) = 5e-50
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGRPLD+ELGD R+VAEALA
Sbjct: 339 HAAVVLEGRPLDMELGDTRTVAEALA 364
>gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
Length = 596
Score = 90.9 bits (224), Expect(4) = 5e-50
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = -3
Query: 410 HYTXDCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIA 231
H DCQ ANALK+LGDSGAGIKP DCSL+ EAY+ LAEQIS VK +GL+DPVVQPEIA
Sbjct: 404 HEYFDCQLANALKALGDSGAGIKP-DCSLNAEEAYVYLAEQISEVKFRGLNDPVVQPEIA 462
Query: 230 LK 225
LK
Sbjct: 463 LK 464
Score = 66.6 bits (161), Expect(4) = 5e-50
Identities = 41/70 (58%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E EDLAIFLK DDI+ANEARRK DHGILRDGT+EVVD D
Sbjct: 256 EDEDLAIFLKQDDILANEARRKMRRVDPTLDMEADLGDDYLHLPDHGILRDGTKEVVDTD 315
Query: 650 -ELSKRSIAQ 624
ELSKRSI+Q
Sbjct: 316 NELSKRSISQ 325
Score = 62.8 bits (151), Expect(4) = 5e-50
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = -2
Query: 540 LLKHLQAESTETSDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
L + QAES ETSDEN LE ERV RMTEIEDLQGP++ PYAPL
Sbjct: 354 LARSRQAESNETSDENEDLERLERVSRMTEIEDLQGPQNLPYAPL 398
Score = 48.1 bits (113), Expect(4) = 5e-50
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGRPLD+ELGD R+VAEALA
Sbjct: 330 HAAVVLEGRPLDMELGDTRTVAEALA 355
>gb|OAY75981.1| putative RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 586
Score = 65.5 bits (158), Expect(4) = 7e-36
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
D Q ANALK+LGDSG G+K +C++S E Y+ L QIS VK +GL PV+QPE ALK
Sbjct: 398 DSQHANALKALGDSG-GMKSINCNMSTEEVYLYLRRQISEVKTRGLEIPVIQPEAALK 454
Score = 58.9 bits (141), Expect(4) = 7e-36
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 14/61 (22%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK-------------DHGILRDGTEEVVDAD-ELSKRSIA 627
E E+LA+FLKHDDI+ANEAR K DHGI RDG++E +DAD E+++R+++
Sbjct: 255 EDEELAVFLKHDDILANEARCKIRRVDPTLDMEADDHGIFRDGSKETMDADYEIARRTLS 314
Query: 626 Q 624
Q
Sbjct: 315 Q 315
Score = 49.7 bits (117), Expect(4) = 7e-36
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -2
Query: 540 LLKHLQAESTETSDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
L + Q S++ DEN +E +V RMTEI+DLQ PRS PYAPL
Sbjct: 344 LARSKQESSSDLPDENVNMERLAKVSRMTEIDDLQAPRSLPYAPL 388
Score = 46.2 bits (108), Expect(4) = 7e-36
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGR LDVELGD R+VAEALA
Sbjct: 320 HAAVVLEGRALDVELGDTRTVAEALA 345
>gb|OAY75989.1| putative RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 416
Score = 65.5 bits (158), Expect(4) = 7e-36
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
D Q ANALK+LGDSG G+K +C++S E Y+ L QIS VK +GL PV+QPE ALK
Sbjct: 228 DSQHANALKALGDSG-GMKSINCNMSTEEVYLYLRRQISEVKTRGLEIPVIQPEAALK 284
Score = 58.9 bits (141), Expect(4) = 7e-36
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 14/61 (22%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK-------------DHGILRDGTEEVVDAD-ELSKRSIA 627
E E+LA+FLKHDDI+ANEAR K DHGI RDG++E +DAD E+++R+++
Sbjct: 85 EDEELAVFLKHDDILANEARCKIRRVDPTLDMEADDHGIFRDGSKETMDADYEIARRTLS 144
Query: 626 Q 624
Q
Sbjct: 145 Q 145
Score = 49.7 bits (117), Expect(4) = 7e-36
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -2
Query: 540 LLKHLQAESTETSDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
L + Q S++ DEN +E +V RMTEI+DLQ PRS PYAPL
Sbjct: 174 LARSKQESSSDLPDENVNMERLAKVSRMTEIDDLQAPRSLPYAPL 218
Score = 46.2 bits (108), Expect(4) = 7e-36
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGR LDVELGD R+VAEALA
Sbjct: 150 HAAVVLEGRALDVELGDTRTVAEALA 175
>ref|XP_020103739.1| probable RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 618
Score = 65.5 bits (158), Expect(4) = 7e-35
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
D Q ANALK+LGDSG G+K +C++S E Y+ L QIS VK +GL PV+QPE ALK
Sbjct: 417 DSQHANALKALGDSG-GMKSINCNMSTEEVYLYLRRQISEVKTRGLEIPVIQPEAALK 473
Score = 55.5 bits (132), Expect(4) = 7e-35
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHDDI+ANEAR K DHGI RDG++E +DAD
Sbjct: 265 EDEELAVFLKHDDILANEARCKIRRVDPTLDMEADVGDDYIHLPDHGIFRDGSKETMDAD 324
Query: 650 -ELSKRSIAQ 624
E+++R+++Q
Sbjct: 325 YEIARRTLSQ 334
Score = 49.7 bits (117), Expect(4) = 7e-35
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -2
Query: 540 LLKHLQAESTETSDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
L + Q S++ DEN +E +V RMTEI+DLQ PRS PYAPL
Sbjct: 363 LARSKQESSSDLPDENVNMERLAKVSRMTEIDDLQAPRSLPYAPL 407
Score = 46.2 bits (108), Expect(4) = 7e-35
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGR LDVELGD R+VAEALA
Sbjct: 339 HAAVVLEGRALDVELGDTRTVAEALA 364
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Vitis vinifera]
emb|CBI39821.3| unnamed protein product, partial [Vitis vinifera]
Length = 602
Score = 69.3 bits (168), Expect(3) = 5e-27
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 7/73 (9%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK-- 225
D QQANALK+LGD+ AG K CSLS EAY SL IS +K GLSDP+V+P+IALK
Sbjct: 414 DSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVL 473
Query: 224 -----NVTVSQYH 201
N++ +++H
Sbjct: 474 NGLTQNISSTKFH 486
Score = 53.5 bits (127), Expect(3) = 5e-27
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHDDI+ANEARRK DHGI RDG++E++D
Sbjct: 261 EDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQ 320
Query: 650 -ELSKRSIAQ 624
E +R+++Q
Sbjct: 321 YEQYRRTLSQ 330
Score = 47.4 bits (111), Expect(3) = 5e-27
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 9/52 (17%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA---------SRVD*NIRRECIPRMAR 473
HAAVVLEGRP+DVEL D R+VAEALA + D ++ RE + R++R
Sbjct: 335 HAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERLERISR 386
>ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Vitis vinifera]
Length = 576
Score = 69.3 bits (168), Expect(3) = 5e-27
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 7/73 (9%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK-- 225
D QQANALK+LGD+ AG K CSLS EAY SL IS +K GLSDP+V+P+IALK
Sbjct: 414 DSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVL 473
Query: 224 -----NVTVSQYH 201
N++ +++H
Sbjct: 474 NGLTQNISSTKFH 486
Score = 53.5 bits (127), Expect(3) = 5e-27
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHDDI+ANEARRK DHGI RDG++E++D
Sbjct: 261 EDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQ 320
Query: 650 -ELSKRSIAQ 624
E +R+++Q
Sbjct: 321 YEQYRRTLSQ 330
Score = 47.4 bits (111), Expect(3) = 5e-27
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 9/52 (17%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA---------SRVD*NIRRECIPRMAR 473
HAAVVLEGRP+DVEL D R+VAEALA + D ++ RE + R++R
Sbjct: 335 HAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERLERISR 386
>ref|XP_022731032.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X1 [Durio zibethinus]
Length = 496
Score = 63.2 bits (152), Expect(4) = 7e-27
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIA---- 231
D QQANAL++ GD+ G++ CSLS E Y SL E IS +K GL DP+V+PE+A
Sbjct: 230 DSQQANALRTSGDAFGGMEQIKCSLSTQEVYGSLRESISQIKATGLKDPIVKPEVAHQVF 289
Query: 230 ---LKNVTVSQYH 201
+++ ++YH
Sbjct: 290 DALTNSISTTKYH 302
Score = 42.4 bits (98), Expect(4) = 7e-27
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDA- 654
E E+LA+FLK DDI+A+EAR K D GI RDG++E+ ++
Sbjct: 77 EDEELAVFLKQDDILASEARWKVRRVDPTLNMEADEGDDYTHLPDRGIFRDGSKEMTESQ 136
Query: 653 DELSKRSIAQ 624
+EL +R+++Q
Sbjct: 137 NELYRRTLSQ 146
Score = 42.0 bits (97), Expect(4) = 7e-27
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGR +DVEL D R+VAEALA
Sbjct: 151 HAAVVLEGRAVDVELEDTRAVAEALA 176
Score = 42.0 bits (97), Expect(4) = 7e-27
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2
Query: 504 SDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
SD +A E +RV RMTEIEDLQGP + P APL
Sbjct: 188 SDGDASWERLDRVSRMTEIEDLQGPNNLPLAPL 220
>ref|XP_022731033.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X2 [Durio zibethinus]
Length = 485
Score = 63.2 bits (152), Expect(4) = 7e-27
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIA---- 231
D QQANAL++ GD+ G++ CSLS E Y SL E IS +K GL DP+V+PE+A
Sbjct: 219 DSQQANALRTSGDAFGGMEQIKCSLSTQEVYGSLRESISQIKATGLKDPIVKPEVAHQVF 278
Query: 230 ---LKNVTVSQYH 201
+++ ++YH
Sbjct: 279 DALTNSISTTKYH 291
Score = 42.4 bits (98), Expect(4) = 7e-27
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDA- 654
E E+LA+FLK DDI+A+EAR K D GI RDG++E+ ++
Sbjct: 66 EDEELAVFLKQDDILASEARWKVRRVDPTLNMEADEGDDYTHLPDRGIFRDGSKEMTESQ 125
Query: 653 DELSKRSIAQ 624
+EL +R+++Q
Sbjct: 126 NELYRRTLSQ 135
Score = 42.0 bits (97), Expect(4) = 7e-27
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGR +DVEL D R+VAEALA
Sbjct: 140 HAAVVLEGRAVDVELEDTRAVAEALA 165
Score = 42.0 bits (97), Expect(4) = 7e-27
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2
Query: 504 SDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
SD +A E +RV RMTEIEDLQGP + P APL
Sbjct: 177 SDGDASWERLDRVSRMTEIEDLQGPNNLPLAPL 209
>ref|XP_022731034.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X3 [Durio zibethinus]
Length = 478
Score = 63.2 bits (152), Expect(4) = 7e-27
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIA---- 231
D QQANAL++ GD+ G++ CSLS E Y SL E IS +K GL DP+V+PE+A
Sbjct: 230 DSQQANALRTSGDAFGGMEQIKCSLSTQEVYGSLRESISQIKATGLKDPIVKPEVAHQVF 289
Query: 230 ---LKNVTVSQYH 201
+++ ++YH
Sbjct: 290 DALTNSISTTKYH 302
Score = 42.4 bits (98), Expect(4) = 7e-27
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 23/70 (32%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDA- 654
E E+LA+FLK DDI+A+EAR K D GI RDG++E+ ++
Sbjct: 77 EDEELAVFLKQDDILASEARWKVRRVDPTLNMEADEGDDYTHLPDRGIFRDGSKEMTESQ 136
Query: 653 DELSKRSIAQ 624
+EL +R+++Q
Sbjct: 137 NELYRRTLSQ 146
Score = 42.0 bits (97), Expect(4) = 7e-27
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVLEGR +DVEL D R+VAEALA
Sbjct: 151 HAAVVLEGRAVDVELEDTRAVAEALA 176
Score = 42.0 bits (97), Expect(4) = 7e-27
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -2
Query: 504 SDENAYLEWPERVCRMTEIEDLQGPRSFPYAPL 406
SD +A E +RV RMTEIEDLQGP + P APL
Sbjct: 188 SDGDASWERLDRVSRMTEIEDLQGPNNLPLAPL 220
>ref|XP_008789680.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X3 [Phoenix dactylifera]
Length = 542
Score = 114 bits (286), Expect = 2e-25
Identities = 88/214 (41%), Positives = 114/214 (53%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLK+DDI+ANEARRK DHGILRDG++E VDA+
Sbjct: 200 EDEELAVFLKNDDILANEARRKIRRVDPTLDMEADLGDDYIHLPDHGILRDGSKETVDAE 259
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQSRLKHQTRMHT*NG 477
++++R+++Q A R V G R + KQ+ +T N
Sbjct: 260 NDIARRTLSQDLNRH--AAVVLEGRALDVELGDTRTVAEALARSKQAESSAETSDEKTNQ 317
Query: 476 QRGFVE*LRLRIFKVLVAFHMHHYTXDC----------QQANALKSLGDSGAGIKPTDCS 327
+R R+ + L A H Y C QQANALK+LGD+ A IKP DCS
Sbjct: 318 ER-LKRVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQANALKALGDTDARIKPIDCS 376
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
LS EAYI L EQIS VK++GL++PVVQPE ALK
Sbjct: 377 LSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALK 410
>ref|XP_008789678.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Phoenix dactylifera]
Length = 607
Score = 114 bits (286), Expect = 2e-25
Identities = 88/214 (41%), Positives = 114/214 (53%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLK+DDI+ANEARRK DHGILRDG++E VDA+
Sbjct: 265 EDEELAVFLKNDDILANEARRKIRRVDPTLDMEADLGDDYIHLPDHGILRDGSKETVDAE 324
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQSRLKHQTRMHT*NG 477
++++R+++Q A R V G R + KQ+ +T N
Sbjct: 325 NDIARRTLSQDLNRH--AAVVLEGRALDVELGDTRTVAEALARSKQAESSAETSDEKTNQ 382
Query: 476 QRGFVE*LRLRIFKVLVAFHMHHYTXDC----------QQANALKSLGDSGAGIKPTDCS 327
+R R+ + L A H Y C QQANALK+LGD+ A IKP DCS
Sbjct: 383 ER-LKRVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQANALKALGDTDARIKPIDCS 441
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
LS EAYI L EQIS VK++GL++PVVQPE ALK
Sbjct: 442 LSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALK 475
>ref|XP_008789679.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 111 bits (278), Expect = 3e-24
Identities = 87/214 (40%), Positives = 111/214 (51%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLK+DDI+ANEARRK DHGILRDG++E VDA+
Sbjct: 265 EDEELAVFLKNDDILANEARRKIRRVDPTLDMEADLGDDYIHLPDHGILRDGSKETVDAE 324
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQSRLKHQTRMHT*NG 477
++++R+++Q A R V G R + KQ + T
Sbjct: 325 NDIARRTLSQDLNRH--AAVVLEGRALDVELGDTRTVAEALARSKQESSAETSDEKT--N 380
Query: 476 QRGFVE*LRLRIFKVLVAFHMHHYTXDC----------QQANALKSLGDSGAGIKPTDCS 327
Q R+ + L A H Y C QQANALK+LGD+ A IKP DCS
Sbjct: 381 QERLKRVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQANALKALGDTDARIKPIDCS 440
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
LS EAYI L EQIS VK++GL++PVVQPE ALK
Sbjct: 441 LSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALK 474
>ref|XP_019704306.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X4 [Elaeis guineensis]
Length = 476
Score = 105 bits (262), Expect = 2e-22
Identities = 86/214 (40%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHD+I+ANEAR K DHGILRDG++E DA+
Sbjct: 265 EDEELAVFLKHDEILANEARHKIRRVDPTLDMEADIGDDYIHLPDHGILRDGSKETADAE 324
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQS-------RLKHQT 498
E ++R+++Q A R V G R A + KQ +Q
Sbjct: 325 NEFARRTLSQDLNRH--AAVVLEGRALDVELGDTRTAAEALARSKQELSTEISDEKTNQE 382
Query: 497 RMHT*NGQRGFVE*LRLRI---FKVLVAFHMHHYTXDCQQANALKSLGDSGAGIKPTDCS 327
RM + +E L+ F L Y D QQANA K+LGD+G GI P DCS
Sbjct: 383 RMEKVSRMTE-IEDLQAPCSLPFAPLCIKDPREY-FDSQQANAFKALGDTGGGITPVDCS 440
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
L EAYI L EQIS VK++GL+ PVVQPE ALK
Sbjct: 441 LKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALK 474
>ref|XP_010913640.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X3 [Elaeis guineensis]
Length = 503
Score = 105 bits (262), Expect = 3e-22
Identities = 86/214 (40%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHD+I+ANEAR K DHGILRDG++E DA+
Sbjct: 162 EDEELAVFLKHDEILANEARHKIRRVDPTLDMEADIGDDYIHLPDHGILRDGSKETADAE 221
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQS-------RLKHQT 498
E ++R+++Q A R V G R A + KQ +Q
Sbjct: 222 NEFARRTLSQDLNRH--AAVVLEGRALDVELGDTRTAAEALARSKQELSTEISDEKTNQE 279
Query: 497 RMHT*NGQRGFVE*LRLRI---FKVLVAFHMHHYTXDCQQANALKSLGDSGAGIKPTDCS 327
RM + +E L+ F L Y D QQANA K+LGD+G GI P DCS
Sbjct: 280 RMEKVSRMTE-IEDLQAPCSLPFAPLCIKDPREY-FDSQQANAFKALGDTGGGITPVDCS 337
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
L EAYI L EQIS VK++GL+ PVVQPE ALK
Sbjct: 338 LKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALK 371
>ref|XP_010913639.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Elaeis guineensis]
Length = 566
Score = 105 bits (262), Expect = 4e-22
Identities = 86/214 (40%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHD+I+ANEAR K DHGILRDG++E DA+
Sbjct: 225 EDEELAVFLKHDEILANEARHKIRRVDPTLDMEADIGDDYIHLPDHGILRDGSKETADAE 284
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQS-------RLKHQT 498
E ++R+++Q A R V G R A + KQ +Q
Sbjct: 285 NEFARRTLSQDLNRH--AAVVLEGRALDVELGDTRTAAEALARSKQELSTEISDEKTNQE 342
Query: 497 RMHT*NGQRGFVE*LRLRI---FKVLVAFHMHHYTXDCQQANALKSLGDSGAGIKPTDCS 327
RM + +E L+ F L Y D QQANA K+LGD+G GI P DCS
Sbjct: 343 RMEKVSRMTE-IEDLQAPCSLPFAPLCIKDPREY-FDSQQANAFKALGDTGGGITPVDCS 400
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
L EAYI L EQIS VK++GL+ PVVQPE ALK
Sbjct: 401 LKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALK 434
>ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Elaeis guineensis]
Length = 606
Score = 105 bits (262), Expect = 4e-22
Identities = 86/214 (40%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHD+I+ANEAR K DHGILRDG++E DA+
Sbjct: 265 EDEELAVFLKHDEILANEARHKIRRVDPTLDMEADIGDDYIHLPDHGILRDGSKETADAE 324
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQS-------RLKHQT 498
E ++R+++Q A R V G R A + KQ +Q
Sbjct: 325 NEFARRTLSQDLNRH--AAVVLEGRALDVELGDTRTAAEALARSKQELSTEISDEKTNQE 382
Query: 497 RMHT*NGQRGFVE*LRLRI---FKVLVAFHMHHYTXDCQQANALKSLGDSGAGIKPTDCS 327
RM + +E L+ F L Y D QQANA K+LGD+G GI P DCS
Sbjct: 383 RMEKVSRMTE-IEDLQAPCSLPFAPLCIKDPREY-FDSQQANAFKALGDTGGGITPVDCS 440
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
L EAYI L EQIS VK++GL+ PVVQPE ALK
Sbjct: 441 LKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALK 474
>ref|XP_017700274.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 105 bits (261), Expect = 5e-22
Identities = 85/214 (39%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLKHDDI+ANEAR K DHGILRDG++E DA+
Sbjct: 265 EDEELAVFLKHDDILANEARCKIRRVDPTLDMEADLGDDYIHLPDHGILRDGSKETADAE 324
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQSRLKHQTRMHT*NG 477
EL++R+++Q A R V G R A + KQ + T
Sbjct: 325 NELARRTLSQDLNRH--ATVVLEGRALDVELGDTRTAAEALARSKQELCTETSDEKT--N 380
Query: 476 QRGFVE*LRLRIFKVLVAFHMHHYTXDC----------QQANALKSLGDSGAGIKPTDCS 327
Q + R+ + L A H Y C QQANA+K+LGD+GAGIKP D S
Sbjct: 381 QERLEKVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQANAVKALGDTGAGIKPVDFS 440
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
L EAY L EQIS VK++GL++ VVQPE LK
Sbjct: 441 LKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLK 474
>gb|OVA05707.1| BSD [Macleaya cordata]
Length = 608
Score = 102 bits (253), Expect = 6e-21
Identities = 82/214 (38%), Positives = 108/214 (50%), Gaps = 34/214 (15%)
Frame = -3
Query: 764 EGEDLAIFLKHDDIVANEARRK----------------------DHGILRDGTEEVVDAD 651
E E+LA+FLK DDI+A EARRK DHGILRDG++E+ D +
Sbjct: 267 EDEELAVFLKQDDILAREARRKIRRVDPTLDMEADEGDDYIHLPDHGILRDGSKEITDTE 326
Query: 650 -ELSKRSIAQXXXXXXXACSCCP*REA-VRCGVGRHAVCC*STCKQSRLKHQTRMHT*NG 477
E +R++AQ A R V G R + K++ L + N
Sbjct: 327 YEQYRRTLAQDLNRH--AAVVLEGRTLDVELGDTRTVAEALAKSKKAELATEKSDDKANQ 384
Query: 476 QRGFVE*LRLRIFKVLVAFHMHHYTX----------DCQQANALKSLGDSGAGIKPTDCS 327
+R R+ + L A H + D QQANALK+LGD+G G K +CS
Sbjct: 385 ER-LERVSRMAEIEDLQAPHNLPFAPLFIKDPREYFDSQQANALKALGDAGVGTKTINCS 443
Query: 326 LSFGEAYISLAEQISAVKLKGLSDPVVQPEIALK 225
LS G+AY SL E IS +K+ GLSDPVV+PE+ALK
Sbjct: 444 LSTGQAYGSLRELISEMKVTGLSDPVVKPEVALK 477
>ref|XP_022886540.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X1 [Olea europaea var. sylvestris]
Length = 544
Score = 69.7 bits (169), Expect(3) = 3e-20
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = -3
Query: 398 DCQQANALKSLGDSGAGIKPTDCSLSFGEAYISLAEQISAVKLKGLSDPVVQPEIAL--- 228
D QQANALK+LGD+G+G+K C++S EAY SL E +S ++++GLS+P+ PE+A
Sbjct: 412 DSQQANALKALGDTGSGLKTLKCNVSPLEAYGSLRELVSEIRVRGLSEPITNPEVAFTVL 471
Query: 227 ----KNVTVSQYH 201
+N++ ++YH
Sbjct: 472 SGLTQNISSTKYH 484
Score = 44.7 bits (104), Expect(3) = 3e-20
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -1
Query: 601 HAAVVLEGRPLDVELGDMRSVAEALA 524
HAAVVL+GR +DVELGD RSVAEALA
Sbjct: 333 HAAVVLQGRVVDVELGDTRSVAEALA 358
Score = 32.7 bits (73), Expect(3) = 3e-20
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 540 LLKHLQAE-STETSDENAYLEWPERVCRMTEIEDLQGPR 427
L + QAE + E S+ N+ ++ R+ R+ E++DLQGPR
Sbjct: 357 LARTKQAELANEASEGNSEIDLSHRISRIAEMDDLQGPR 395