BLASTX nr result

ID: Ophiopogon24_contig00007701 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00007701
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KQK97367.1| hypothetical protein SETIT_012129mg, partial [Set...    59   1e-07
ref|XP_022684484.1| putative FBD-associated F-box protein At5g38...    59   1e-07
ref|XP_013456707.1| F-box/RNI/FBD-like domain protein [Medicago ...    59   2e-07
ref|XP_003607639.2| F-box/RNI/FBD-like domain protein [Medicago ...    59   2e-07
ref|XP_008806767.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    57   9e-07
gb|PAN38272.1| hypothetical protein PAHAL_G00289 [Panicum hallii]      54   7e-06

>gb|KQK97367.1| hypothetical protein SETIT_012129mg, partial [Setaria italica]
          Length = 345

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
 Frame = -1

Query: 396 RKLMSGCPVLEDLQFQECHFTDPDITSNVLKRLDISFC-SFDGPQFRLSAPSLRSLCFKF 220
           ++L SGCPVLEDL+  +CH   P+I S  LK L I+ C ++ G    ++AP+L S     
Sbjct: 139 QQLPSGCPVLEDLELNKCHLHSPEIKSYTLKNLIITGCTTYSGRVLTITAPALVSFYLVI 198

Query: 219 N-SEVNQMLEVLFVDLSSLVDASIGLGSQWNDEPFK-FTSLTKKCN-------------- 88
              E N    VL  ++ +LV A + L S   + P K   SLT   N              
Sbjct: 199 TVVEWNSDYGVLVNEMPALVKAKVCLESSSPEGPCKLLCSLTNVRNLELSGLETLSILRG 258

Query: 87  -SKDLGTFCNLEKLELSAFSMKDNF 16
            S    TF NL  L  +   + D+F
Sbjct: 259 TSDTFPTFSNLRTLLFNGCDLSDDF 283


>ref|XP_022684484.1| putative FBD-associated F-box protein At5g38570 [Setaria italica]
          Length = 363

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
 Frame = -1

Query: 396 RKLMSGCPVLEDLQFQECHFTDPDITSNVLKRLDISFC-SFDGPQFRLSAPSLRSLCFKF 220
           ++L SGCPVLEDL+  +CH   P+I S  LK L I+ C ++ G    ++AP+L S     
Sbjct: 129 QQLPSGCPVLEDLELNKCHLHSPEIKSYTLKNLIITGCTTYSGRVLTITAPALVSFYLVI 188

Query: 219 N-SEVNQMLEVLFVDLSSLVDASIGLGSQWNDEPFK-FTSLTKKCN-------------- 88
              E N    VL  ++ +LV A + L S   + P K   SLT   N              
Sbjct: 189 TVVEWNSDYGVLVNEMPALVKAKVCLESSSPEGPCKLLCSLTNVRNLELSGLETLSILRG 248

Query: 87  -SKDLGTFCNLEKLELSAFSMKDNF 16
            S    TF NL  L  +   + D+F
Sbjct: 249 TSDTFPTFSNLRTLLFNGCDLSDDF 273


>ref|XP_013456707.1| F-box/RNI/FBD-like domain protein [Medicago truncatula]
 gb|KEH30738.1| F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 378

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
 Frame = -1

Query: 396 RKLMSGCPVLEDLQFQECHFTDPDITSNV--LKRLDISFCSF----DGPQFRLSAPSLRS 235
           ++L SGCPVL+DL F++C++ + +I+  +  LK+LDI F S     +   F++ A +L S
Sbjct: 190 QRLFSGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLS 249

Query: 234 LCFKFNSEVNQMLEVLFVDLSSLVDASIGLG 142
           L +K N  +N  L    V+ +S+VDA+I LG
Sbjct: 250 LSYKSNPTINCFL----VNSTSIVDANIDLG 276


>ref|XP_003607639.2| F-box/RNI/FBD-like domain protein [Medicago truncatula]
 gb|AES89836.2| F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 456

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
 Frame = -1

Query: 396 RKLMSGCPVLEDLQFQECHFTDPDITSNV--LKRLDISFCSF----DGPQFRLSAPSLRS 235
           ++L SGCPVL+DL F++C++ + +I+  +  LK+LDI F S     +   F++ A +L S
Sbjct: 190 QRLFSGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLS 249

Query: 234 LCFKFNSEVNQMLEVLFVDLSSLVDASIGLG 142
           L +K N  +N  L    V+ +S+VDA+I LG
Sbjct: 250 LSYKSNPTINCFL----VNSTSIVDANIDLG 276


>ref|XP_008806767.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At3g59240 [Phoenix
           dactylifera]
 ref|XP_008806768.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At3g59240 [Phoenix
           dactylifera]
 ref|XP_008806770.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At3g59240 [Phoenix
           dactylifera]
 ref|XP_008806771.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At3g59240 [Phoenix
           dactylifera]
          Length = 437

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 44/124 (35%), Positives = 66/124 (53%)
 Frame = -1

Query: 396 RKLMSGCPVLEDLQFQECHFTDPDITSNVLKRLDISFCSFDGPQFRLSAPSLRSLCFKFN 217
           ++L+SGCP+LE L F+ C+FT  +I S+ LKRL++          R+SAP  R L F + 
Sbjct: 189 KELLSGCPLLEVLSFEHCYFTSLEICSHALKRLELYVPDDAEAVVRISAP--RLLSFAYW 246

Query: 216 SEVNQMLEVLFVDLSSLVDASIGLGSQWNDEPFKFTSLTKKCNSKDLGTFCNLEKLELSA 37
             V Q  E+  ++LSSL  ASI L S  +++         +  S  L    N+E LE  +
Sbjct: 247 GMVFQ--ELTLMNLSSLTCASICLFSNSSNDDDAGDMDRYRRISNLLAGLHNVESLEFLS 304

Query: 36  FSMK 25
            + K
Sbjct: 305 VAFK 308


>gb|PAN38272.1| hypothetical protein PAHAL_G00289 [Panicum hallii]
          Length = 326

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
 Frame = -1

Query: 396 RKLMSGCPVLEDLQFQECHFTDPDITSNVLKRLDISFC-SFDGPQFRLSAPSLRSLCFKF 220
           R+L SGCPVLEDL+  EC    P+ITS  L+ L ++ C ++ G    ++AP+L S     
Sbjct: 135 RQLSSGCPVLEDLKLDECLLDPPEITSCTLRNLIVADCMTYGGNVLTITAPTLVSFYLVI 194

Query: 219 NSEVNQMLEVLFVDLSSLVDASIGLGSQWNDEPFKFTSLTKKCNSKDLGTFCNLEKLELS 40
                    VL  ++ +LV A++ L     D P   +S  + C  K L    +++ LELS
Sbjct: 195 TVVGWSWDGVLVNEMPALVKATVCLK---QDRPSTSSSPKRPC--KLLCNLIDVKNLELS 249