BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00007563
         (712 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   296   1e-97
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   310   2e-95
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   288   3e-86
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281...   278   3e-86
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   287   1e-85
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   287   2e-85
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]         274   3e-85
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   270   5e-85
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   278   1e-83
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]        266   1e-82
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   275   1e-82
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   279   1e-82
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     278   1e-82
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     277   3e-82
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   277   3e-82
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   277   3e-82
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     274   3e-81
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   274   6e-81
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   260   8e-81
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         270   1e-80

>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  296 bits (759), Expect = 1e-97
 Identities = 149/204 (73%), Positives = 170/204 (83%), Gaps = 2/204 (0%)
 Frame = -3

Query: 647 EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGSPKE-GVRF 471
           +A  SSE ++W  AM +EM SL++N TW+LA LPKGKKAIGCK V+AKKEG P +  VR+
Sbjct: 115 DAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCKWVFAKKEGFPNQVDVRY 174

Query: 470 KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
           KARLVAKGYAQ EG+DYNEVFSPVVKHSSIRI+L LVAQ DL+LVQ+DVKTAFLHG+L+E
Sbjct: 175 KARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVAQLDLELVQMDVKTAFLHGNLEE 234

Query: 290 -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
            IYMTQP GF+V GKE  VCKL+KSLYGLKQS RQWYKRFD FM+ +GY RS YD CVYL
Sbjct: 235 EIYMTQPEGFKVAGKENMVCKLEKSLYGLKQSSRQWYKRFDEFMLRQGYKRSKYDHCVYL 294

Query: 113 HKLPGGEYIYLLLYVDDMLIVSKN 42
            KL  G +IYLLLYVDDM I SKN
Sbjct: 295 RKLKDGSFIYLLLYVDDMFIASKN 318


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  310 bits (793), Expect = 2e-95
 Identities = 157/216 (72%), Positives = 177/216 (81%), Gaps = 2/216 (0%)
 Frame = -3

Query: 647  EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRF 471
            EA   SE ++W +AM +EM SL +N TW+LA LPKGKKAIGCK VYAKK+G S K  VR+
Sbjct: 584  EAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRY 643

Query: 470  KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
            KARLVAKGYAQ EG+DYNEVFSPVVKHSSIR+LL LVAQ D++LVQ+DVKTAFLHGDL+E
Sbjct: 644  KARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEE 703

Query: 290  -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
             IYMTQP GF+V GKE   CKL+KSLYGLKQSPRQWYKRFD FM+ + YTRS YD CVYL
Sbjct: 704  EIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYL 763

Query: 113  HKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
             KL  G +IYLLLYVDDMLI SKN   I KLK QL+
Sbjct: 764  RKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLN 799


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  288 bits (737), Expect = 3e-86
 Identities = 145/216 (67%), Positives = 172/216 (79%), Gaps = 2/216 (0%)
 Frame = -3

Query: 647  EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRF 471
            EA LSS+S +W  AM DEM SLHKN TW+L   P G+K I CK V+ KKEG SP EGV++
Sbjct: 796  EAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKY 855

Query: 470  KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
            KAR+VA+G+ Q EGVDYNE+FSPVV+H+SIR+LL +VA  +L+L QLDVKTAFLHG+L+E
Sbjct: 856  KARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEE 915

Query: 290  -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
             IYMTQP GF+V GKE  VCKLKKSLYGLKQSPRQWYKRFDS+M+  GYTRS YD CVY 
Sbjct: 916  EIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYY 975

Query: 113  HKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            ++L    +IYL+LYVDDMLI +K    I KLKG LS
Sbjct: 976  NRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLS 1011


>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
            Japonica Group]
          Length = 651

 Score =  278 bits (710), Expect = 3e-86
 Identities = 142/217 (65%), Positives = 170/217 (78%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            ++A +S + NRW  AM DEM SL KN +WEL KLPK KK I CK ++ +KEG SP +  R
Sbjct: 381  SDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEAR 440

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 441  YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 500

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 501  EDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 560

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 561  L-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 596


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  287 bits (734), Expect = 1e-85
 Identities = 149/216 (68%), Positives = 165/216 (76%), Gaps = 2/216 (0%)
 Frame = -3

Query: 647  EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGS-PKEGVRF 471
            EA    ES +W  AM +E+ SLHKN TWEL K P  +K +GCK V+ KKEG    E  RF
Sbjct: 1306 EAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRF 1365

Query: 470  KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
            KARLVAKG+ Q EG+DYNEVFSPVVKHSSIR+LL +VA+ DL+L QLDVKTAFLHG+L+E
Sbjct: 1366 KARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEE 1425

Query: 290  -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
             IYM QP GF V GKE+ VC LKKSLYGLKQSPRQWYKRFDSFMI  GYTR  YD CVY 
Sbjct: 1426 TIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYH 1485

Query: 113  HKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
             KL  G +IYLLLYVDDMLI SKN   I KLK QLS
Sbjct: 1486 RKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLS 1521


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  287 bits (734), Expect = 2e-85
 Identities = 149/216 (68%), Positives = 165/216 (76%), Gaps = 2/216 (0%)
 Frame = -3

Query: 647  EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGS-PKEGVRF 471
            EA    ES +W  AM +E+ SLHKN TWEL K P  +K +GCK V+ KKEG    E  RF
Sbjct: 1327 EAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRF 1386

Query: 470  KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
            KARLVAKG+ Q EG+DYNEVFSPVVKHSSIR+LL +VA+ DL+L QLDVKTAFLHG+L+E
Sbjct: 1387 KARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEE 1446

Query: 290  -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
             IYM QP GF V GKE+ VC LKKSLYGLKQSPRQWYKRFDSFMI  GYTR  YD CVY 
Sbjct: 1447 TIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYH 1506

Query: 113  HKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
             KL  G +IYLLLYVDDMLI SKN   I KLK QLS
Sbjct: 1507 RKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLS 1542


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score =  274 bits (701), Expect = 3e-85
 Identities = 141/217 (64%), Positives = 168/217 (77%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650 TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
           +EA +S + NRW  AM DEM SL KN TWEL KLPK KK I CK ++ +KE  SP +   
Sbjct: 206 SEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAM 265

Query: 473 FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
           +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 266 YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 325

Query: 293 E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
           E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 326 EDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 385

Query: 116 LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
           + K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 386 V-KVADGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 421


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  270 bits (691), Expect = 5e-85
 Identities = 132/203 (65%), Positives = 162/203 (79%), Gaps = 2/203 (0%)
 Frame = -3

Query: 605 MEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGSPK-EGVRFKARLVAKGYAQLEG 429
           M +E+ SLHKN+TW L KLPKGK+ + CK +Y KK+G P  E  R KARLV KG+ Q EG
Sbjct: 1   MNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEG 60

Query: 428 VDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE-IYMTQPTGFRVTG 252
           +D+NE+FSPVV+H+SIRILL  VA +DL+L QLDVKTAFLHG+L+E IYM QP GF V  
Sbjct: 61  IDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPS 120

Query: 251 KEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYLHKLPGGEYIYLLLY 72
           KE  VC+LKKSLYGLKQ+PRQWYK+FDSFMIG+GY+RS YD C+Y  + P G +IYLLLY
Sbjct: 121 KEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLY 180

Query: 71  VDDMLIVSKNSVAIAKLKGQLSD 3
           VDDMLI S++   I+KLK QL++
Sbjct: 181 VDDMLIASRDKSLISKLKAQLNN 203


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  278 bits (711), Expect = 1e-83
 Identities = 137/218 (62%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGSPK-EGVR 474
            +EA    +S +W  AM +E+ SLHKN+TW L KLPKGK+ + CK +Y KK+G P  E  R
Sbjct: 515  SEAVSCVDSAKWLVAMNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPR 574

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
             KARLV KG+ Q EG+D+NE+FSPVV+H+SIRILL  VA +DL+L QLDVKTAFLHG+L+
Sbjct: 575  CKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELE 634

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V  KE  VC+LKKSLYGLKQ+PRQWYK+FDSFMIG+GY+RS YD C+Y
Sbjct: 635  EEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIY 694

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLSD 3
              + P G +IYLLLYVDDMLI S++   I+KLK QL++
Sbjct: 695  FQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNN 732


>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
          Length = 576

 Score =  266 bits (681), Expect = 1e-82
 Identities = 138/217 (63%), Positives = 163/217 (75%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650 TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
           TEA +S +   W +AM++EM SL KN TW+L  LPK KK + CK ++ +KEG SP E  R
Sbjct: 143 TEAVVSGDRENWISAMQEEMQSLEKNGTWKLVHLPKQKKPVHCKWIFKRKEGLSPSEPPR 202

Query: 473 FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDL- 297
           FKARLVAKG++Q+ GVDYN+VFSPVVKHSSIR    +VA  DL+L QLDVKT FLHG+L 
Sbjct: 203 FKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELE 262

Query: 296 DEIYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
           DEIYM QP GF V GKE+ VCKLK+SLYGLKQSPRQWYKRFDSFM+  G+  S +D CVY
Sbjct: 263 DEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKWSEFDSCVY 322

Query: 116 LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
           + K   G  IYLLLYVDDMLI +K+   I  LK QLS
Sbjct: 323 I-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLS 358


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  275 bits (703), Expect = 1e-82
 Identities = 140/217 (64%), Positives = 168/217 (77%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            +EA +S + NRW   M DEM SL KN TWEL KLPK KK+I CK ++ +KEG SP +  R
Sbjct: 562  SEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEAR 621

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+  +D+N+VFSP+VKHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 622  YKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 681

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 682  EDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVY 741

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   I KLK QLS
Sbjct: 742  L-KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLS 777


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  279 bits (713), Expect = 1e-82
 Identities = 141/216 (65%), Positives = 166/216 (76%), Gaps = 2/216 (0%)
 Frame = -3

Query: 647  EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGSPK-EGVRF 471
            EA    ++ +W  AM +EM SLH+N+TW L K PKG + +GCK VY KKEG P+ E  RF
Sbjct: 1383 EATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKGMRTVGCKWVYKKKEGIPEVEAARF 1442

Query: 470  KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
            KARLVAKG++Q EG+DYNE+FSPVVKHSSIR+LL LVAQ+DL+L QLDVKTAFLHGDL+E
Sbjct: 1443 KARLVAKGFSQKEGIDYNEIFSPVVKHSSIRVLLALVAQFDLELQQLDVKTAFLHGDLEE 1502

Query: 290  -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
             IYM QP GF   GKE+ VC+LKKSLYGLKQSPRQWYKRFD+FM   G++RS +D CVY 
Sbjct: 1503 TIYMDQPEGFLAEGKEDHVCQLKKSLYGLKQSPRQWYKRFDAFMTTHGFSRSAFDSCVYH 1562

Query: 113  HKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
             K+ G   IYLLLYVDDMLI + N   I  LK  LS
Sbjct: 1563 KKMSGNSMIYLLLYVDDMLIAANNITEINILKKLLS 1598


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  278 bits (710), Expect = 1e-82
 Identities = 142/217 (65%), Positives = 170/217 (78%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            ++A +S + NRW  AM DEM SL KN +WEL KLPK KK I CK ++ +KEG SP +  R
Sbjct: 729  SDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEAR 788

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 789  YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 848

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 849  EDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 908

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 909  L-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 944


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  277 bits (708), Expect = 3e-82
 Identities = 141/217 (64%), Positives = 169/217 (77%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            +EA +S + NRW  AM DEM SL KN TWE  KLPK KK I CK ++ +KEG SP +  R
Sbjct: 855  SEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEAR 914

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+ G+D+N+VFSP++KHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 915  YKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELE 974

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 975  EDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1034

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 1035 L-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 1070


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  277 bits (708), Expect = 3e-82
 Identities = 141/217 (64%), Positives = 169/217 (77%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            +EA +S + NRW  AM DEM SL KN TWE  KLPK KK I CK ++ +KEG SP +  R
Sbjct: 855  SEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEAR 914

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+ G+D+N+VFSP++KHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 915  YKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELE 974

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 975  EDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1034

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 1035 L-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 1070


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  277 bits (709), Expect = 3e-82
 Identities = 142/217 (65%), Positives = 169/217 (77%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            +EA +S + NRW  AM DEM SL KN TWEL KLPK KK I CK ++ +KEG S  +  R
Sbjct: 1027 SEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEAR 1086

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARL+AKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 1087 YKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 1146

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + + RS YD CVY
Sbjct: 1147 EDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1206

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 1207 L-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 1242


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  274 bits (700), Expect = 3e-81
 Identities = 141/217 (64%), Positives = 168/217 (77%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            +EA +S + NRW  AM DEM SL KN TWEL KLPK KK I CK ++ +KEG SP +  R
Sbjct: 792  SEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEAR 851

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA +D +L Q++VKTAFLHG+L+
Sbjct: 852  YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELE 911

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM+ + +  S YD CVY
Sbjct: 912  EDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVY 971

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            L K+  G  IYLLLYVDDMLI +K+   I KLK QLS
Sbjct: 972  L-KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLS 1007


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  274 bits (700), Expect = 6e-81
 Identities = 135/217 (62%), Positives = 167/217 (76%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGSPK-EGVR 474
            +EA    +S +W  AM++E+ SL KN+TW+L  LP+GK+ I CK ++ +KEG P  E  R
Sbjct: 475  SEAISGDDSAKWTAAMQEEVESLLKNETWDLVMLPEGKRVISCKWIFKRKEGIPGVENAR 534

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KAR V +G+ Q EG+D+NEVFSPVV+HSSIR+LL LVA YDL+L QLDVKTAFLHG+L+
Sbjct: 535  YKARFVVRGFDQQEGIDFNEVFSPVVRHSSIRVLLALVALYDLELEQLDVKTAFLHGNLE 594

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IY+ QP GF V GKE  VC+LKKSLYGLKQSPRQWYKRFDSFM G GY+RS YD CVY
Sbjct: 595  EEIYIQQPEGFVVPGKENHVCRLKKSLYGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVY 654

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
              KL  G  +YLLLYVDDMLI +++   + KLK QL+
Sbjct: 655  FQKLSDGSLVYLLLYVDDMLIAARDKTLVDKLKVQLN 691


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  260 bits (665), Expect = 8e-81
 Identities = 132/216 (61%), Positives = 161/216 (74%), Gaps = 2/216 (0%)
 Frame = -3

Query: 647 EAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEGSPK-EGVRF 471
           EA  S E+++W  AM++EM SL KN TWEL  LP+G K +GCK V  +KEG P  E  RF
Sbjct: 198 EAIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRF 257

Query: 470 KARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLDE 291
           KARLVAKG++Q EG+DY+EVFSPVVKH +IR+LL +V+  D+ L QL+VK AFLHG+L+E
Sbjct: 258 KARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEE 317

Query: 290 -IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVYL 114
            +YM+QP GF   GK+  VC LKKSLYGLKQSPRQWYKRFD+FMI   + R+ +D CVY 
Sbjct: 318 QVYMSQPDGFLEVGKKNHVCLLKKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYS 377

Query: 113 HKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            KL  G YIYLLLYVDDMLI +K+   I  LK  LS
Sbjct: 378 RKLSDGSYIYLLLYVDDMLIAAKSKTDIDALKAMLS 413


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  270 bits (690), Expect = 1e-80
 Identities = 139/217 (64%), Positives = 167/217 (76%), Gaps = 2/217 (0%)
 Frame = -3

Query: 650  TEAELSSESNRWCNAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVR 474
            +EA +S + NRW  AM DEM SL KN TWEL KLPK KK I CK ++ +K+G SP +   
Sbjct: 602  SEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAM 661

Query: 473  FKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLVLVAQYDLDLVQLDVKTAFLHGDLD 294
            +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA +D +L Q+DVKTAFLHG+L+
Sbjct: 662  YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELE 721

Query: 293  E-IYMTQPTGFRVTGKEESVCKLKKSLYGLKQSPRQWYKRFDSFMIGKGYTRSPYDPCVY 117
            E IYM Q  GF V GKE  VC+LKKSLYGLKQS RQWYKRFDSFM+ + + RS YD CVY
Sbjct: 722  EDIYMEQSEGFVVPGKENLVCRLKKSLYGLKQSSRQWYKRFDSFMLSQKFRRSNYDSCVY 781

Query: 116  LHKLPGGEYIYLLLYVDDMLIVSKNSVAIAKLKGQLS 6
            + K+  G  IYLLLYVDDMLI +K+   IAKLK QLS
Sbjct: 782  V-KVADGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLS 817