BLASTX nr result

ID: Ophiopogon24_contig00006958 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006958
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251513.1| tubby-like F-box protein 5 [Asparagus offici...    63   4e-09

>ref|XP_020251513.1| tubby-like F-box protein 5 [Asparagus officinalis]
 ref|XP_020251515.1| tubby-like F-box protein 5 [Asparagus officinalis]
 gb|ONK81252.1| uncharacterized protein A4U43_C01F27030 [Asparagus officinalis]
          Length = 415

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 191 MSFKSIVRELKEMXXXXXXXXXXXXXXG-ALRCPWPNMPHRHLEEEDDREQGRWANLTPE 15
           MS KSIVRELKEM              G A+RCPWPN  H H ++E+  EQG WANL PE
Sbjct: 1   MSLKSIVRELKEMRDGFSSSSARRGGIGGAVRCPWPNSRHGH-QDEELYEQGNWANLPPE 59

Query: 14  LLLD 3
           LLLD
Sbjct: 60  LLLD 63


Top