BLASTX nr result

ID: Ophiopogon24_contig00006810 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006810
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269402.1| inactive protein FRIGIDA-like [Asparagus off...    84   7e-17
ref|XP_020261227.1| protein FRIGIDA-like [Asparagus officinalis]...    84   2e-16

>ref|XP_020269402.1| inactive protein FRIGIDA-like [Asparagus officinalis]
          Length = 310

 Score = 84.0 bits (206), Expect = 7e-17
 Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 37/131 (28%)
 Frame = -1

Query: 351 LDFINSSYDA--------NSGNKPIKIVAAAAD----DRQFSELESICRISRPRALRKYI 208
           LD INSS DA        NS    +K     A     +RQ SE+ES+CR + P+ALRKYI
Sbjct: 84  LDSINSSLDAVSTIKTPTNSSLNAVKTPEPEASLPVAERQDSEVESLCRSNAPKALRKYI 143

Query: 207 ITNLGEVDRLRREV-------------------------XXXXXXGNQDAIDTRRAGILL 103
           +T+L E+DRLRREV                               G+ +AI+ RRAGILL
Sbjct: 144 MTHLSEIDRLRREVPEALKLAFVPEKLVLEAMGKFYLQGCKAYEHGDSNAINCRRAGILL 203

Query: 102 LEFYMFAGCPV 70
           LEFY+ AGCPV
Sbjct: 204 LEFYLIAGCPV 214


>ref|XP_020261227.1| protein FRIGIDA-like [Asparagus officinalis]
 gb|ONK72143.1| uncharacterized protein A4U43_C04F16230 [Asparagus officinalis]
          Length = 872

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 37/131 (28%)
 Frame = -1

Query: 351 LDFINSSYDA--------NSGNKPIKIVAAAAD----DRQFSELESICRISRPRALRKYI 208
           LD INSS DA        NS    +K     A     +RQ SE+ES+CR + P+ALRKYI
Sbjct: 84  LDSINSSLDAVSTIKTPTNSSLNAVKTPEPEASLPVAERQDSEVESLCRSNAPKALRKYI 143

Query: 207 ITNLGEVDRLRREV-------------------------XXXXXXGNQDAIDTRRAGILL 103
           +T+L E+DRLRREV                               G+ +AI+ RRAGILL
Sbjct: 144 MTHLSEIDRLRREVPEALKLAFVPEKLVLEAMGKFYLQGCKAYEHGDSNAINCRRAGILL 203

Query: 102 LEFYMFAGCPV 70
           LEFY+ AGCPV
Sbjct: 204 LEFYLIAGCPV 214


Top