BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006694
         (1588 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008805052.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   435   0.0  
ref|XP_010914378.1| PREDICTED: DNA repair helicase XPD [Elaeis g...   436   0.0  
gb|PKA64061.1| DNA repair helicase UVH6 [Apostasia shenzhenica]       432   0.0  
ref|XP_009384033.1| PREDICTED: DNA repair helicase XPD [Musa acu...   444   0.0  
ref|XP_010278060.1| PREDICTED: DNA repair helicase XPD isoform X...   430   0.0  
ref|XP_010278066.1| PREDICTED: DNA repair helicase XPD isoform X...   430   0.0  
ref|XP_020114269.1| DNA repair helicase XPD isoform X1 [Ananas c...   439   0.0  
ref|XP_020114270.1| DNA repair helicase XPD isoform X2 [Ananas c...   439   0.0  
gb|OAY69430.1| DNA repair helicase UVH6 [Ananas comosus]              439   0.0  
gb|PKU60038.1| DNA repair helicase UVH6 [Dendrobium catenatum]        434   0.0  
gb|OVA05497.1| Xeroderma pigmentosum group D protein [Macleaya c...   431   0.0  
ref|XP_002277634.1| PREDICTED: DNA repair helicase XPD [Vitis vi...   436   0.0  
ref|XP_023738379.1| DNA repair helicase XPD [Lactuca sativa]          426   0.0  
ref|XP_020672912.1| DNA repair helicase XPD [Dendrobium catenatum]    434   0.0  
gb|PIN25845.1| RNA polymerase II transcription initiation [Handr...   430   0.0  
ref|XP_020593539.1| DNA repair helicase XPD [Phalaenopsis equest...   434   0.0  
gb|EOX94794.1| RAD3-like DNA-binding helicase protein isoform 3 ...   424   0.0  
gb|EOX94795.1| RAD3-like DNA-binding helicase protein isoform 4 ...   424   0.0  
gb|EOX94793.1| RAD3-like DNA-binding helicase protein isoform 2 ...   424   0.0  
ref|XP_021279539.1| DNA repair helicase XPD [Herrania umbratica]      424   0.0  

>ref|XP_008805052.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPD [Phoenix
            dactylifera]
          Length = 758

 Score =  435 bits (1119), Expect(2) = 0.0
 Identities = 216/226 (95%), Positives = 222/226 (98%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDASRLR+EYNRLVEGLAQRGNL LTDAWL+NPALPDDILKEAVPGNIRRAEHFLSV
Sbjct: 275  FKATDASRLRAEYNRLVEGLAQRGNLALTDAWLSNPALPDDILKEAVPGNIRRAEHFLSV 334

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQTENVETE PV FVASV+SQAGIDQKML+FCYDRLHSLMLTLEITDTD
Sbjct: 335  LRRLVQYLKGRLQTENVETERPVDFVASVSSQAGIDQKMLRFCYDRLHSLMLTLEITDTD 394

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATLVGTY +GFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 395  EFLHIQTICDFATLVGTYMQGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 454

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 455  SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 500



 Score =  434 bits (1116), Expect(2) = 0.0
 Identities = 218/280 (77%), Positives = 239/280 (85%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYD+IYPEQY YM++LKRALDARGHCLLEMPTGTGKT ALLSLITSY+LAR
Sbjct: 4   QIEDVTVYFPYDYIYPEQYDYMVELKRALDARGHCLLEMPTGTGKTVALLSLITSYALAR 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS P KLLYCTRTVHEMEKTLAE+RLLH  L                      KNLCVNP
Sbjct: 64  PSXPLKLLYCTRTVHEMEKTLAELRLLHSHLPPT--------HRSLALGLSSRKNLCVNP 115

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
             LS+++RDSVDSACRRLTASWVR+AAAE+PPG VP CSFFE+Y   + SG PD+V+LPP
Sbjct: 116 YVLSSASRDSVDSACRRLTASWVRAAAAEQPPGAVPTCSFFESYDRAASSG-PDAVLLPP 174

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTL DLR  G+EKG CPYFLARQMI+YANVVVYSYQYLLDPKVAGIISREMQRECVVV
Sbjct: 175 GVYTLGDLRALGREKGWCPYFLARQMIRYANVVVYSYQYLLDPKVAGIISREMQRECVVV 234

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVR+QTLDGATRNL++MAQEIDR
Sbjct: 235 FDEAHNIDNVCIEALSVSVRRQTLDGATRNLHRMAQEIDR 274


>ref|XP_010914378.1| PREDICTED: DNA repair helicase XPD [Elaeis guineensis]
          Length = 758

 Score =  436 bits (1122), Expect(2) = 0.0
 Identities = 217/226 (96%), Positives = 222/226 (98%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDASRLR+EYNRLVEGLAQRGNL LTDAWLANPALPDDILKEAVPGNIRRAEHFLSV
Sbjct: 275  FKATDASRLRAEYNRLVEGLAQRGNLALTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 334

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQTENVETE PV FVASV+SQAGIDQKML+FCYDRLHSLMLTLEITDTD
Sbjct: 335  LRRLVQYLKGRLQTENVETERPVDFVASVSSQAGIDQKMLRFCYDRLHSLMLTLEITDTD 394

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATLVGTY +GFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 395  EFLHIQTICDFATLVGTYMQGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 454

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 455  SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 500



 Score =  429 bits (1102), Expect(2) = 0.0
 Identities = 215/279 (77%), Positives = 237/279 (84%)
 Frame = +2

Query: 68  LEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLARP 247
           ++D+TVYFPYD+IYPEQY YM++LKRALDARGHCLLEMPTGTGKT ALLSLI+SY+LARP
Sbjct: 5   IDDVTVYFPYDYIYPEQYEYMVELKRALDARGHCLLEMPTGTGKTVALLSLISSYALARP 64

Query: 248 SDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNPA 427
           S P KLLYCTRTVHEMEKTLAE+RLLH  L                      KNLCVNP 
Sbjct: 65  SPPLKLLYCTRTVHEMEKTLAELRLLHSHLPPT--------HRSLALGLSSRKNLCVNPI 116

Query: 428 ALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPPG 607
           ALS+++RDSVDSACRRLTASWVR+AAAE+PPG VP C FFE Y   + SG PD+V+LPPG
Sbjct: 117 ALSSASRDSVDSACRRLTASWVRAAAAEQPPGAVPTCPFFEAYDRAASSG-PDAVLLPPG 175

Query: 608 VYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVVF 787
           VYTL DLR  G+EKG CPYFLARQMI+YANVVVYSYQYLLDPKVAGIISREMQRECVVVF
Sbjct: 176 VYTLGDLRALGREKGWCPYFLARQMIRYANVVVYSYQYLLDPKVAGIISREMQRECVVVF 235

Query: 788 DEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           DEAHNIDNVCIEALSVSVR+QTLDGATRNL++MAQEIDR
Sbjct: 236 DEAHNIDNVCIEALSVSVRRQTLDGATRNLHRMAQEIDR 274


>gb|PKA64061.1| DNA repair helicase UVH6 [Apostasia shenzhenica]
          Length = 772

 Score =  432 bits (1112), Expect(2) = 0.0
 Identities = 214/226 (94%), Positives = 219/226 (96%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA RLR+EYNRLVEGLAQRGNLP TD WLANPALPDDILKEAVPGNIRRAEHFLSV
Sbjct: 274  FKATDAGRLRAEYNRLVEGLAQRGNLPRTDTWLANPALPDDILKEAVPGNIRRAEHFLSV 333

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQ E+VETE PVAFVAS+NSQ GI+QKML+FCYDRLHSLMLTLEITDTD
Sbjct: 334  LRRLVQYLKGRLQVESVETEVPVAFVASINSQTGIEQKMLRFCYDRLHSLMLTLEITDTD 393

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 394  EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 453

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SVIITSGTLSPIDLYPRLLNFNPVISRSF MSLTRDCICPMVLTRG
Sbjct: 454  SVIITSGTLSPIDLYPRLLNFNPVISRSFRMSLTRDCICPMVLTRG 499



 Score =  418 bits (1074), Expect(2) = 0.0
 Identities = 204/280 (72%), Positives = 234/280 (83%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+E++TVYFPYDHIYPEQ+ YM++LKRALDARGHCLLEMPTGTGKT ALLSLITSY+LA 
Sbjct: 4   QIEEVTVYFPYDHIYPEQFEYMVELKRALDARGHCLLEMPTGTGKTIALLSLITSYALAH 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS P KL+YCTRTVHEMEKTLAE+RLLH  L                      KNLCVNP
Sbjct: 64  PSSPLKLIYCTRTVHEMEKTLAELRLLHSHLPPTSPLLALGLSSR--------KNLCVNP 115

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
            ALSAS+RDSVDS CRRLTASWVR+ AAER PG +P CSF+E++   + SG  DS++LPP
Sbjct: 116 VALSASSRDSVDSTCRRLTASWVRALAAERTPGAIPTCSFYESFDRAASSG--DSILLPP 173

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTL+DLR +G+++G CPYFLAR MI+YAN+VVYSYQYLLDPKVA IIS+EMQRECVVV
Sbjct: 174 GVYTLEDLRAFGRKQGWCPYFLARHMIRYANIVVYSYQYLLDPKVASIISKEMQRECVVV 233

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVS+R+QTLDGATRNLN++ QEIDR
Sbjct: 234 FDEAHNIDNVCIEALSVSIRRQTLDGATRNLNRIGQEIDR 273


>ref|XP_009384033.1| PREDICTED: DNA repair helicase XPD [Musa acuminata subsp.
            malaccensis]
          Length = 759

 Score =  444 bits (1143), Expect(2) = 0.0
 Identities = 217/226 (96%), Positives = 226/226 (100%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA+RLR+EYNRLVEGLAQRG+LP+TDAWLANPALPDDILKEAVPGNIRRAEHFLSV
Sbjct: 276  FKATDATRLRTEYNRLVEGLAQRGSLPITDAWLANPALPDDILKEAVPGNIRRAEHFLSV 335

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKML+FCYDRLHSLMLTLEITDTD
Sbjct: 336  LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLRFCYDRLHSLMLTLEITDTD 395

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATL+GTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVF+RFQ
Sbjct: 396  EFLHIQTICDFATLIGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFERFQ 455

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 456  SVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 501



 Score =  401 bits (1030), Expect(2) = 0.0
 Identities = 203/281 (72%), Positives = 229/281 (81%), Gaps = 1/281 (0%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPY+HIYPEQY YM++LKRALDARGHCLLEMPTGTGKT ALLSLI SYSL+R
Sbjct: 4   QIEDVTVYFPYEHIYPEQYEYMVELKRALDARGHCLLEMPTGTGKTVALLSLIASYSLSR 63

Query: 245 PSD-PTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVN 421
           P D P KLLYCTRTVHEMEKTLAE+RLL   +  D                   KNLC+N
Sbjct: 64  PGDRPLKLLYCTRTVHEMEKTLAELRLLLSHVPPD------LRRSLLALGLSSRKNLCIN 117

Query: 422 PAALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLP 601
           P  +SA++RDSVDSACRRLTASWVR+AAAE P   VP CSFFE +   + S    SVMLP
Sbjct: 118 PTIVSAASRDSVDSACRRLTASWVRAAAAEDPA--VPTCSFFEGFDRAASSSNA-SVMLP 174

Query: 602 PGVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVV 781
           PGVYTLQDLR +G++ G CPY+LARQ I+YAN+VVYSYQYLLDPKVA IIS+EMQRECVV
Sbjct: 175 PGVYTLQDLRAFGRDNGWCPYYLARQTIRYANIVVYSYQYLLDPKVASIISKEMQRECVV 234

Query: 782 VFDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           VFDEAHNIDNVCIEALSVS+R+QTL+GATRNLN+M QEIDR
Sbjct: 235 VFDEAHNIDNVCIEALSVSIRRQTLEGATRNLNRMVQEIDR 275


>ref|XP_010278060.1| PREDICTED: DNA repair helicase XPD isoform X1 [Nelumbo nucifera]
          Length = 758

 Score =  430 bits (1105), Expect(2) = 0.0
 Identities = 211/225 (93%), Positives = 219/225 (97%)
 Frame = +3

Query: 912  KATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSVL 1091
            KATDA RLR+EYNRLVEGLAQRGNLP+TD WL+NP LP+DILKEAVPGNIRRAEHFLSVL
Sbjct: 274  KATDAGRLRAEYNRLVEGLAQRGNLPITDNWLSNPVLPNDILKEAVPGNIRRAEHFLSVL 333

Query: 1092 RRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 1271
            RRLVQY KGRLQTENVE EG VAFVAS+NSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE
Sbjct: 334  RRLVQYFKGRLQTENVEKEGLVAFVASINSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 393

Query: 1272 FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 1451
            FLHIQT+CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS+AIKPVF+RFQS
Sbjct: 394  FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASIAIKPVFERFQS 453

Query: 1452 VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 454  VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 498



 Score =  407 bits (1046), Expect(2) = 0.0
 Identities = 205/280 (73%), Positives = 231/280 (82%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           QLED+TVYFPYDHIYPEQYAYML+LKRALDARGHCLLEMPTGTGKT ALLSLITSY+L++
Sbjct: 4   QLEDVTVYFPYDHIYPEQYAYMLELKRALDARGHCLLEMPTGTGKTIALLSLITSYALSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS+P KLLYCTRTVHEMEKTLAE+RLLH    S                    KNLC+NP
Sbjct: 64  PSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLSQ----LGPSARILALGLSSRKNLCINP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
           + +S S+RDSVD+ACR+LTASWVR+ A E P   +P C FFENY    +  G D+ MLPP
Sbjct: 120 SVVSGSSRDSVDAACRKLTASWVRAMAIENP--NIPTCCFFENY----EKAGSDA-MLPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +GKEKG CPYFLAR M++ ANVVVYSYQYLLDPKVAGIIS+EMQRECVVV
Sbjct: 173 GVYTLQDLRAFGKEKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQRECVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVS+R QTL+GATRNL+KM+QEI+R
Sbjct: 233 FDEAHNIDNVCIEALSVSIRTQTLEGATRNLSKMSQEIER 272


>ref|XP_010278066.1| PREDICTED: DNA repair helicase XPD isoform X2 [Nelumbo nucifera]
          Length = 676

 Score =  430 bits (1105), Expect(2) = 0.0
 Identities = 211/225 (93%), Positives = 219/225 (97%)
 Frame = +3

Query: 912  KATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSVL 1091
            KATDA RLR+EYNRLVEGLAQRGNLP+TD WL+NP LP+DILKEAVPGNIRRAEHFLSVL
Sbjct: 274  KATDAGRLRAEYNRLVEGLAQRGNLPITDNWLSNPVLPNDILKEAVPGNIRRAEHFLSVL 333

Query: 1092 RRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 1271
            RRLVQY KGRLQTENVE EG VAFVAS+NSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE
Sbjct: 334  RRLVQYFKGRLQTENVEKEGLVAFVASINSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 393

Query: 1272 FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 1451
            FLHIQT+CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS+AIKPVF+RFQS
Sbjct: 394  FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASIAIKPVFERFQS 453

Query: 1452 VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 454  VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 498



 Score =  407 bits (1046), Expect(2) = 0.0
 Identities = 205/280 (73%), Positives = 231/280 (82%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           QLED+TVYFPYDHIYPEQYAYML+LKRALDARGHCLLEMPTGTGKT ALLSLITSY+L++
Sbjct: 4   QLEDVTVYFPYDHIYPEQYAYMLELKRALDARGHCLLEMPTGTGKTIALLSLITSYALSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS+P KLLYCTRTVHEMEKTLAE+RLLH    S                    KNLC+NP
Sbjct: 64  PSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLSQ----LGPSARILALGLSSRKNLCINP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
           + +S S+RDSVD+ACR+LTASWVR+ A E P   +P C FFENY    +  G D+ MLPP
Sbjct: 120 SVVSGSSRDSVDAACRKLTASWVRAMAIENP--NIPTCCFFENY----EKAGSDA-MLPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +GKEKG CPYFLAR M++ ANVVVYSYQYLLDPKVAGIIS+EMQRECVVV
Sbjct: 173 GVYTLQDLRAFGKEKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQRECVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVS+R QTL+GATRNL+KM+QEI+R
Sbjct: 233 FDEAHNIDNVCIEALSVSIRTQTLEGATRNLSKMSQEIER 272


>ref|XP_020114269.1| DNA repair helicase XPD isoform X1 [Ananas comosus]
          Length = 753

 Score =  439 bits (1129), Expect(2) = 0.0
 Identities = 215/225 (95%), Positives = 223/225 (99%)
 Frame = +3

Query: 912  KATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSVL 1091
            KATDA+RLR+EYNRLV+GLAQRGNLP+TDAW +NP LPDDILKEAVPGNIRRAEHFLSVL
Sbjct: 271  KATDANRLRAEYNRLVDGLAQRGNLPMTDAWFSNPTLPDDILKEAVPGNIRRAEHFLSVL 330

Query: 1092 RRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 1271
            RRLVQYLKGRL+TENVETEGPVAFV+SVNSQAGIDQKML+FCYDRLHSLMLTLEITDTDE
Sbjct: 331  RRLVQYLKGRLETENVETEGPVAFVSSVNSQAGIDQKMLRFCYDRLHSLMLTLEITDTDE 390

Query: 1272 FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 1451
            FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS
Sbjct: 391  FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 450

Query: 1452 VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 451  VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 495



 Score =  394 bits (1011), Expect(2) = 0.0
 Identities = 203/280 (72%), Positives = 231/280 (82%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+E++TVYFPY+HIYPEQY YM++LKRALDARGH LLEMPTGTGKT+ALLSLI SYSL  
Sbjct: 4   QIEEVTVYFPYEHIYPEQYGYMVELKRALDARGHALLEMPTGTGKTSALLSLILSYSLHH 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           P  P KLLYCTRTVHEMEKTL+E+RLL   L  +                   KNLCVNP
Sbjct: 64  P--PLKLLYCTRTVHEMEKTLSELRLLLPYLPPN---------RILALGLSSRKNLCVNP 112

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
            ALSA++RDSVDSACRRLTA+WVRSA A  P   VP CSFFE++   +D+G PD+V+LPP
Sbjct: 113 LALSAASRDSVDSACRRLTATWVRSATAADP--SVPTCSFFESFDRAADAG-PDNVLLPP 169

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR  G+++G CPYFLAR++I +A+VVVYSYQYLLDPKVA IISREMQRECVVV
Sbjct: 170 GVYTLQDLRAVGRDRGWCPYFLARRLIPFASVVVYSYQYLLDPKVATIISREMQRECVVV 229

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVRKQTLDGATRNL++MAQEIDR
Sbjct: 230 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLSRMAQEIDR 269


>ref|XP_020114270.1| DNA repair helicase XPD isoform X2 [Ananas comosus]
          Length = 675

 Score =  439 bits (1129), Expect(2) = 0.0
 Identities = 215/225 (95%), Positives = 223/225 (99%)
 Frame = +3

Query: 912  KATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSVL 1091
            KATDA+RLR+EYNRLV+GLAQRGNLP+TDAW +NP LPDDILKEAVPGNIRRAEHFLSVL
Sbjct: 271  KATDANRLRAEYNRLVDGLAQRGNLPMTDAWFSNPTLPDDILKEAVPGNIRRAEHFLSVL 330

Query: 1092 RRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 1271
            RRLVQYLKGRL+TENVETEGPVAFV+SVNSQAGIDQKML+FCYDRLHSLMLTLEITDTDE
Sbjct: 331  RRLVQYLKGRLETENVETEGPVAFVSSVNSQAGIDQKMLRFCYDRLHSLMLTLEITDTDE 390

Query: 1272 FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 1451
            FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS
Sbjct: 391  FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 450

Query: 1452 VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 451  VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 495



 Score =  394 bits (1011), Expect(2) = 0.0
 Identities = 203/280 (72%), Positives = 231/280 (82%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+E++TVYFPY+HIYPEQY YM++LKRALDARGH LLEMPTGTGKT+ALLSLI SYSL  
Sbjct: 4   QIEEVTVYFPYEHIYPEQYGYMVELKRALDARGHALLEMPTGTGKTSALLSLILSYSLHH 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           P  P KLLYCTRTVHEMEKTL+E+RLL   L  +                   KNLCVNP
Sbjct: 64  P--PLKLLYCTRTVHEMEKTLSELRLLLPYLPPN---------RILALGLSSRKNLCVNP 112

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
            ALSA++RDSVDSACRRLTA+WVRSA A  P   VP CSFFE++   +D+G PD+V+LPP
Sbjct: 113 LALSAASRDSVDSACRRLTATWVRSATAADP--SVPTCSFFESFDRAADAG-PDNVLLPP 169

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR  G+++G CPYFLAR++I +A+VVVYSYQYLLDPKVA IISREMQRECVVV
Sbjct: 170 GVYTLQDLRAVGRDRGWCPYFLARRLIPFASVVVYSYQYLLDPKVATIISREMQRECVVV 229

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVRKQTLDGATRNL++MAQEIDR
Sbjct: 230 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLSRMAQEIDR 269


>gb|OAY69430.1| DNA repair helicase UVH6 [Ananas comosus]
          Length = 757

 Score =  439 bits (1129), Expect(2) = 0.0
 Identities = 215/225 (95%), Positives = 223/225 (99%)
 Frame = +3

Query: 912  KATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSVL 1091
            KATDA+RLR+EYNRLV+GLAQRGNLP+TDAW +NP LPDDILKEAVPGNIRRAEHFLSVL
Sbjct: 275  KATDANRLRAEYNRLVDGLAQRGNLPMTDAWFSNPTLPDDILKEAVPGNIRRAEHFLSVL 334

Query: 1092 RRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 1271
            RRLVQYLKGRL+TENVETEGPVAFV+SVNSQAGIDQKML+FCYDRLHSLMLTLEITDTDE
Sbjct: 335  RRLVQYLKGRLETENVETEGPVAFVSSVNSQAGIDQKMLRFCYDRLHSLMLTLEITDTDE 394

Query: 1272 FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 1451
            FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS
Sbjct: 395  FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 454

Query: 1452 VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 455  VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 499



 Score =  392 bits (1007), Expect(2) = 0.0
 Identities = 203/282 (71%), Positives = 232/282 (82%), Gaps = 2/282 (0%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+E++TVYFPY+HIYPEQY YM++LKRALDARGH LLEMPTGTGKT+ALLSLI SYSL  
Sbjct: 4   QIEEVTVYFPYEHIYPEQYGYMVELKRALDARGHALLEMPTGTGKTSALLSLILSYSLHH 63

Query: 245 P--SDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCV 418
              S P KLLYCTRTVHEMEKTL+E+RLL   L  +                   KNLCV
Sbjct: 64  SPHSPPLKLLYCTRTVHEMEKTLSELRLLLPYLPPN---------RILALGLSSRKNLCV 114

Query: 419 NPAALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVML 598
           NP ALSA++RDSVDSACRRLTA+WVRSAAA  P   VP CSFFE++   +D+G PD+V+L
Sbjct: 115 NPLALSAASRDSVDSACRRLTATWVRSAAAADP--SVPTCSFFESFDRAADAG-PDNVLL 171

Query: 599 PPGVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECV 778
           PPGVYTLQDLR  G+++G CPYFLAR++I +A+VVVYSYQYLLDPKVA IISREMQRECV
Sbjct: 172 PPGVYTLQDLRAVGRDRGWCPYFLARRLIPFASVVVYSYQYLLDPKVATIISREMQRECV 231

Query: 779 VVFDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           VVFDEAHNIDNVCIEALSVSVRKQTLDGATRNL++MAQ+IDR
Sbjct: 232 VVFDEAHNIDNVCIEALSVSVRKQTLDGATRNLSRMAQDIDR 273


>gb|PKU60038.1| DNA repair helicase UVH6 [Dendrobium catenatum]
          Length = 737

 Score =  434 bits (1115), Expect(2) = 0.0
 Identities = 213/226 (94%), Positives = 221/226 (97%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA RLR EYNRLVEGLAQRGNLP+TD WLANPALPDDILKEAVPGNIRRAEHFL+V
Sbjct: 272  FKATDAGRLREEYNRLVEGLAQRGNLPMTDTWLANPALPDDILKEAVPGNIRRAEHFLAV 331

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQ E+VETE PVAFVAS+N+QAGIDQKMLKFCYDRL+SLMLTLEIT+TD
Sbjct: 332  LRRLVQYLKGRLQVESVETEVPVAFVASINAQAGIDQKMLKFCYDRLYSLMLTLEITETD 391

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDP+LQLSCHDASLAIKPVFDRFQ
Sbjct: 392  EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPILQLSCHDASLAIKPVFDRFQ 451

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 452  SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 497



 Score =  397 bits (1021), Expect(2) = 0.0
 Identities = 193/279 (69%), Positives = 227/279 (81%)
 Frame = +2

Query: 68  LEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLARP 247
           +E++ VYFPYDHIYPEQY YM++LKRALDARGHCLLEMPTGTGKT ALLSLITSY+LA P
Sbjct: 5   IEEVAVYFPYDHIYPEQYEYMVELKRALDARGHCLLEMPTGTGKTIALLSLITSYALAHP 64

Query: 248 SDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNPA 427
           S P KL+YCTRTVHEMEKTLAE+R+L+  L                      KNLC+NP 
Sbjct: 65  SSPLKLVYCTRTVHEMEKTLAELRVLYSYLPPSSSLLALGLSSR--------KNLCINPD 116

Query: 428 ALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPPG 607
            LSAS+RDS+DS+CRRLTASWVR+ AA+RP G +P C FFE+Y    D    D+++LP G
Sbjct: 117 VLSASSRDSIDSSCRRLTASWVRALAADRPSGAIPTCPFFESY----DKASRDAILLPSG 172

Query: 608 VYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVVF 787
           VYTL+DLR +G+++  CPYFLAR MI+YAN+VVYSYQYLLDPKVA IIS+EMQRECVVVF
Sbjct: 173 VYTLEDLRAFGRDRKWCPYFLARNMIQYANIVVYSYQYLLDPKVANIISKEMQRECVVVF 232

Query: 788 DEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           DEAHNIDNVCIEALSVS+R+QTLDGATRNLN++AQ ID+
Sbjct: 233 DEAHNIDNVCIEALSVSIRRQTLDGATRNLNRIAQVIDK 271


>gb|OVA05497.1| Xeroderma pigmentosum group D protein [Macleaya cordata]
          Length = 962

 Score =  431 bits (1108), Expect(2) = 0.0
 Identities = 209/226 (92%), Positives = 221/226 (97%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA+RLR EYNRLVEGLAQRGNL +TDAWLANPALPDDIL+EAVPGNIR+AEHFLSV
Sbjct: 477  FKATDANRLRREYNRLVEGLAQRGNLAITDAWLANPALPDDILREAVPGNIRKAEHFLSV 536

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQTENVE EGPVAFVAS+N+Q GIDQKML+FCYDRLHSLM+TLEITDTD
Sbjct: 537  LRRLVQYLKGRLQTENVEKEGPVAFVASINAQTGIDQKMLRFCYDRLHSLMMTLEITDTD 596

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EF+HIQT+CDFATLVGTYTRGFSIIIEP DERMPHIPDPVLQLSCHDASLAIKPVF+RFQ
Sbjct: 597  EFIHIQTICDFATLVGTYTRGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQ 656

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 657  SVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 702



 Score =  396 bits (1018), Expect(2) = 0.0
 Identities = 200/276 (72%), Positives = 226/276 (81%)
 Frame = +2

Query: 77   ITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLARPSDP 256
            +TVYFPYDHIYPEQY+YM++LKRALDA+GHCLLEMPTGTGKT ALLSLITSYSL++PS+P
Sbjct: 212  VTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYSLSKPSNP 271

Query: 257  TKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNPAALS 436
             KLLYCTRTVHEMEKTLAE+RLLH+                        KNLCVNP  +S
Sbjct: 272  PKLLYCTRTVHEMEKTLAELRLLHEYQLKH----LGPSARILALGLSSRKNLCVNPNVIS 327

Query: 437  ASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPPGVYT 616
             ++RDSVD+ACR+LTASWVR  A E P   +P CSFFE Y    +  G D+V LPPGVYT
Sbjct: 328  TNSRDSVDAACRKLTASWVREIAIENP--NIPTCSFFEKY----ERAGSDAV-LPPGVYT 380

Query: 617  LQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVVFDEA 796
            LQDLR +GK KG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQRECVVVFDEA
Sbjct: 381  LQDLRSFGKAKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEA 440

Query: 797  HNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
            HNIDNVCIEALSVSVR+QTL+GATRNL+KMAQEIDR
Sbjct: 441  HNIDNVCIEALSVSVRQQTLEGATRNLSKMAQEIDR 476


>ref|XP_002277634.1| PREDICTED: DNA repair helicase XPD [Vitis vinifera]
          Length = 758

 Score =  436 bits (1121), Expect(2) = 0.0
 Identities = 212/226 (93%), Positives = 222/226 (98%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA RLR+EYNRLVEGLAQRGNLP++D WLANPALPDDILKEAVPGNIRRAEHFLSV
Sbjct: 273  FKATDAGRLRAEYNRLVEGLAQRGNLPISDTWLANPALPDDILKEAVPGNIRRAEHFLSV 332

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYL GRL+TENVE EGPVAFVAS+NSQAGIDQKMLKFCYDRLHSLMLTLEITDTD
Sbjct: 333  LRRLVQYLHGRLETENVEKEGPVAFVASINSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 392

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVF+RFQ
Sbjct: 393  EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFERFQ 452

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTR+CICPMVLTRG
Sbjct: 453  SVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRNCICPMVLTRG 498



 Score =  391 bits (1004), Expect(2) = 0.0
 Identities = 195/280 (69%), Positives = 226/280 (80%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYD+IYPEQY+YM++LKRALDA+GH LLEMPTGTGKT ALLSLITSY+L++
Sbjct: 4   QIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYALSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS+P KLLYCTRTVHEMEKTLAE+RLLHQ                        KNLC+NP
Sbjct: 64  PSNPIKLLYCTRTVHEMEKTLAELRLLHQY----QLRHLGPAARILALGLSSRKNLCINP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
           A +SA  RDSVD+ CR+LTASWVR+ A E P   +P C FFENY   +        +LPP
Sbjct: 120 AVVSAENRDSVDAGCRKLTASWVRALAVENP--NIPTCQFFENYEKAASEA-----VLPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +G++KG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQRE VVV
Sbjct: 173 GVYTLQDLRAFGRDKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVR+QTL+GATRNL+KMAQEI+R
Sbjct: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSKMAQEINR 272


>ref|XP_023738379.1| DNA repair helicase XPD [Lactuca sativa]
          Length = 756

 Score =  426 bits (1096), Expect(2) = 0.0
 Identities = 207/226 (91%), Positives = 217/226 (96%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA RLR+EYNRLV+GLAQRGNLPL D WLANPALPDDILKEAVPGNIRRAEHFLSV
Sbjct: 273  FKATDAGRLRAEYNRLVDGLAQRGNLPLGDTWLANPALPDDILKEAVPGNIRRAEHFLSV 332

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRL T+NVE EGP+ FV +VNS  GIDQKMLKFCYDRLHSLMLTLEITDTD
Sbjct: 333  LRRLVQYLKGRLDTDNVEKEGPLTFVNAVNSHVGIDQKMLKFCYDRLHSLMLTLEITDTD 392

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATLVGTYTRGFSIIIEP+DERMPHIPDPVLQLSCHDASLAIKPVF+RFQ
Sbjct: 393  EFLHIQTICDFATLVGTYTRGFSIIIEPYDERMPHIPDPVLQLSCHDASLAIKPVFERFQ 452

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRG
Sbjct: 453  SVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRG 498



 Score =  399 bits (1026), Expect(2) = 0.0
 Identities = 200/280 (71%), Positives = 229/280 (81%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYDHIYPEQY+YM++LKRALDA+GHCLLEMPTGTGKT ALLSLITSY+L++
Sbjct: 4   QIEDVTVYFPYDHIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYTLSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS+P KLLYCTRTVHEMEKTLAE++LLH+    +                   KNLC+NP
Sbjct: 64  PSNPVKLLYCTRTVHEMEKTLAELKLLHKYQLEN----IGPSARMLALGLSSRKNLCINP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
             +SA  RDSVD+ CR+LTASWVR+ A E P   +P CSFFE Y    +  G D+V LPP
Sbjct: 120 DVVSAENRDSVDAGCRKLTASWVRALAIENP--NIPTCSFFETY----EKAGSDAV-LPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +GKEKG CPYFLAR MI++ANVVVYSYQYLLDPKVAG IS+EMQRE VVV
Sbjct: 173 GVYTLQDLRMFGKEKGWCPYFLARHMIQFANVVVYSYQYLLDPKVAGFISKEMQRESVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVRKQTL+GATRNLNKM+QEI+R
Sbjct: 233 FDEAHNIDNVCIEALSVSVRKQTLEGATRNLNKMSQEIER 272


>ref|XP_020672912.1| DNA repair helicase XPD [Dendrobium catenatum]
          Length = 765

 Score =  434 bits (1115), Expect(2) = 0.0
 Identities = 213/226 (94%), Positives = 221/226 (97%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA RLR EYNRLVEGLAQRGNLP+TD WLANPALPDDILKEAVPGNIRRAEHFL+V
Sbjct: 282  FKATDAGRLREEYNRLVEGLAQRGNLPMTDTWLANPALPDDILKEAVPGNIRRAEHFLAV 341

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQ E+VETE PVAFVAS+N+QAGIDQKMLKFCYDRL+SLMLTLEIT+TD
Sbjct: 342  LRRLVQYLKGRLQVESVETEVPVAFVASINAQAGIDQKMLKFCYDRLYSLMLTLEITETD 401

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDP+LQLSCHDASLAIKPVFDRFQ
Sbjct: 402  EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPILQLSCHDASLAIKPVFDRFQ 461

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 462  SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 507



 Score =  389 bits (1000), Expect(2) = 0.0
 Identities = 193/289 (66%), Positives = 227/289 (78%), Gaps = 10/289 (3%)
 Frame = +2

Query: 68  LEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLARP 247
           +E++ VYFPYDHIYPEQY YM++LKRALDARGHCLLEMPTGTGKT ALLSLITSY+LA P
Sbjct: 5   IEEVAVYFPYDHIYPEQYEYMVELKRALDARGHCLLEMPTGTGKTIALLSLITSYALAHP 64

Query: 248 SDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNPA 427
           S P KL+YCTRTVHEMEKTLAE+R+L+  L                      KNLC+NP 
Sbjct: 65  SSPLKLVYCTRTVHEMEKTLAELRVLYSYLPPSSSLLALGLSSR--------KNLCINPD 116

Query: 428 ALSASTRDSVDSACRRLTASWVRSAAAER----------PPGEVPLCSFFENYTALSDSG 577
            LSAS+RDS+DS+CRRLTASWVR+ AA+R          P G +P C FFE+Y    D  
Sbjct: 117 VLSASSRDSIDSSCRRLTASWVRALAADREQSSRGESLQPSGAIPTCPFFESY----DKA 172

Query: 578 GPDSVMLPPGVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISR 757
             D+++LP GVYTL+DLR +G+++  CPYFLAR MI+YAN+VVYSYQYLLDPKVA IIS+
Sbjct: 173 SRDAILLPSGVYTLEDLRAFGRDRKWCPYFLARNMIQYANIVVYSYQYLLDPKVANIISK 232

Query: 758 EMQRECVVVFDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           EMQRECVVVFDEAHNIDNVCIEALSVS+R+QTLDGATRNLN++AQ ID+
Sbjct: 233 EMQRECVVVFDEAHNIDNVCIEALSVSIRRQTLDGATRNLNRIAQVIDK 281


>gb|PIN25845.1| RNA polymerase II transcription initiation [Handroanthus
            impetiginosus]
          Length = 757

 Score =  430 bits (1106), Expect(2) = 0.0
 Identities = 209/225 (92%), Positives = 217/225 (96%)
 Frame = +3

Query: 912  KATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSVL 1091
            KATDA RLRSEYNRLVEGLAQRGNLPLTDAW ANPALPDDILKEAVPGNIRRAEHFLSVL
Sbjct: 274  KATDAGRLRSEYNRLVEGLAQRGNLPLTDAWFANPALPDDILKEAVPGNIRRAEHFLSVL 333

Query: 1092 RRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTDE 1271
            RRLVQY KGRLQTENVE EGPV FVAS+N+Q GIDQKML+FCYDRLHSL+LTLEITDTDE
Sbjct: 334  RRLVQYFKGRLQTENVEKEGPVTFVASINAQVGIDQKMLRFCYDRLHSLLLTLEITDTDE 393

Query: 1272 FLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQS 1451
            FLHIQT+CD ATLVGTYTRGFSIIIEPFDERMPHIPDPVLQL CHDASLAIKPVF+RFQS
Sbjct: 394  FLHIQTICDLATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFERFQS 453

Query: 1452 VIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            V+ITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRG
Sbjct: 454  VVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRG 498



 Score =  392 bits (1007), Expect(2) = 0.0
 Identities = 198/281 (70%), Positives = 227/281 (80%), Gaps = 1/281 (0%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYD+IYPEQYAYM++LKRALDA+GHCLLEMPTGTGKT ALLSLITSY L++
Sbjct: 4   QIEDVTVYFPYDNIYPEQYAYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           PS+P KLLYCTRTVHEMEKTLAE++ LH                         KNLCVNP
Sbjct: 64  PSNPVKLLYCTRTVHEMEKTLAELKFLHNYQVK----ILGPSARILALGLSSRKNLCVNP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYT-ALSDSGGPDSVMLP 601
           + +SA  RDSVD+ACR+LTASWVR+ A E P   +P C FFENY  A SD+      +LP
Sbjct: 120 SVVSAENRDSVDAACRKLTASWVRALAVENP--NIPTCEFFENYEKAASDA------VLP 171

Query: 602 PGVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVV 781
           PGVYTLQDLR +GK KG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQRE VV
Sbjct: 172 PGVYTLQDLRAFGKAKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVV 231

Query: 782 VFDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           VFDEAHNIDNVCIEALSVSVR+QTL+GATRNLN+M+QEI+R
Sbjct: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLNRMSQEIER 272


>ref|XP_020593539.1| DNA repair helicase XPD [Phalaenopsis equestris]
          Length = 765

 Score =  434 bits (1116), Expect(2) = 0.0
 Identities = 213/226 (94%), Positives = 220/226 (97%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDA RLR EYNRLVEGLAQRGNLP+TD WLANPALPDDIL+EAVPGNIR+AEHFL+V
Sbjct: 282  FKATDAGRLREEYNRLVEGLAQRGNLPMTDTWLANPALPDDILREAVPGNIRKAEHFLAV 341

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYLKGRLQ E+VETE PVAFVAS+N QAGIDQKML+FCYDRLHSLMLTLEITDTD
Sbjct: 342  LRRLVQYLKGRLQVESVETEVPVAFVASINGQAGIDQKMLRFCYDRLHSLMLTLEITDTD 401

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 402  EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 461

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG
Sbjct: 462  SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 507



 Score =  385 bits (989), Expect(2) = 0.0
 Identities = 192/289 (66%), Positives = 226/289 (78%), Gaps = 10/289 (3%)
 Frame = +2

Query: 68  LEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLARP 247
           +E++ VYFPYD+IYPEQY YM++LKRALDARGHCLLEMPTGTGKT ALLSLITSY+LA P
Sbjct: 5   IEEVVVYFPYDYIYPEQYEYMVELKRALDARGHCLLEMPTGTGKTIALLSLITSYALAHP 64

Query: 248 SDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNPA 427
           S P KL+YCTRTVHEMEKTLAE+R+L+  L                      KNLC+NP 
Sbjct: 65  SSPLKLIYCTRTVHEMEKTLAELRVLYSYLPPSSSLLALGLSSR--------KNLCINPD 116

Query: 428 ALSASTRDSVDSACRRLTASWVRSAAAERPP----------GEVPLCSFFENYTALSDSG 577
            LSAS+RDSVDSACRRLTASWVR+ AA+R            G +  C FFE+Y    D  
Sbjct: 117 VLSASSRDSVDSACRRLTASWVRALAADREEYNDRNSLQRSGAISTCPFFESY----DRA 172

Query: 578 GPDSVMLPPGVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISR 757
             D+++LP GVYTL+DLR +G+++  CPYFLAR M++YAN++VYSYQYLLDPKVA IIS+
Sbjct: 173 SRDAILLPSGVYTLEDLRAFGRDRKWCPYFLARNMVRYANIIVYSYQYLLDPKVANIISK 232

Query: 758 EMQRECVVVFDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           EMQRECVVVFDEAHNIDNVCIEALSVS+RKQTLDGATRNL+++AQEIDR
Sbjct: 233 EMQRECVVVFDEAHNIDNVCIEALSVSIRKQTLDGATRNLSRIAQEIDR 281


>gb|EOX94794.1| RAD3-like DNA-binding helicase protein isoform 3 [Theobroma cacao]
          Length = 758

 Score =  424 bits (1089), Expect(2) = 0.0
 Identities = 205/226 (90%), Positives = 217/226 (96%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDASRLRSEYNRLVEGLA RGNLP+TD WL+NPALPDDILKEAVPGNIRRAEHFL V
Sbjct: 273  FKATDASRLRSEYNRLVEGLALRGNLPITDTWLSNPALPDDILKEAVPGNIRRAEHFLHV 332

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYL+GRL+T+NVE E PV FVAS++S AGIDQK LKFCYDRLHSLMLTLEITDTD
Sbjct: 333  LRRLVQYLRGRLETDNVEKESPVGFVASISSHAGIDQKTLKFCYDRLHSLMLTLEITDTD 392

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATL+GTY RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 393  EFLHIQTICDFATLIGTYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 452

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRG
Sbjct: 453  SVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRG 498



 Score =  395 bits (1015), Expect(2) = 0.0
 Identities = 196/280 (70%), Positives = 225/280 (80%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYDHIYPEQY+YM++LKRALDA+GHCLLEMPTGTGKT ALLSLITSYSL++
Sbjct: 4   QIEDVTVYFPYDHIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYSLSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           P  P KL+YCTRTVHEMEKTLAE++LLH                         KNLCVNP
Sbjct: 64  PQSPIKLIYCTRTVHEMEKTLAELKLLHNYQIKH----LGPQARILAIGLSSRKNLCVNP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
             L+A  RDSVD+ CR+LTASWVR+ AAE P   VP C FFENY   + +      +LPP
Sbjct: 120 TVLAAENRDSVDAGCRKLTASWVRAMAAENP--NVPTCQFFENYEKAASAA-----VLPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +GKEKG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQ+E VVV
Sbjct: 173 GVYTLQDLRAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVR+QTL+GATRNLN+++QEIDR
Sbjct: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLNRISQEIDR 272


>gb|EOX94795.1| RAD3-like DNA-binding helicase protein isoform 4 [Theobroma cacao]
          Length = 683

 Score =  424 bits (1089), Expect(2) = 0.0
 Identities = 205/226 (90%), Positives = 217/226 (96%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDASRLRSEYNRLVEGLA RGNLP+TD WL+NPALPDDILKEAVPGNIRRAEHFL V
Sbjct: 273  FKATDASRLRSEYNRLVEGLALRGNLPITDTWLSNPALPDDILKEAVPGNIRRAEHFLHV 332

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYL+GRL+T+NVE E PV FVAS++S AGIDQK LKFCYDRLHSLMLTLEITDTD
Sbjct: 333  LRRLVQYLRGRLETDNVEKESPVGFVASISSHAGIDQKTLKFCYDRLHSLMLTLEITDTD 392

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATL+GTY RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 393  EFLHIQTICDFATLIGTYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 452

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRG
Sbjct: 453  SVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRG 498



 Score =  395 bits (1015), Expect(2) = 0.0
 Identities = 196/280 (70%), Positives = 225/280 (80%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYDHIYPEQY+YM++LKRALDA+GHCLLEMPTGTGKT ALLSLITSYSL++
Sbjct: 4   QIEDVTVYFPYDHIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYSLSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           P  P KL+YCTRTVHEMEKTLAE++LLH                         KNLCVNP
Sbjct: 64  PQSPIKLIYCTRTVHEMEKTLAELKLLHNYQIKH----LGPQARILAIGLSSRKNLCVNP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
             L+A  RDSVD+ CR+LTASWVR+ AAE P   VP C FFENY   + +      +LPP
Sbjct: 120 TVLAAENRDSVDAGCRKLTASWVRAMAAENP--NVPTCQFFENYEKAASAA-----VLPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +GKEKG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQ+E VVV
Sbjct: 173 GVYTLQDLRAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVR+QTL+GATRNLN+++QEIDR
Sbjct: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLNRISQEIDR 272


>gb|EOX94793.1| RAD3-like DNA-binding helicase protein isoform 2 [Theobroma cacao]
          Length = 672

 Score =  424 bits (1089), Expect(2) = 0.0
 Identities = 205/226 (90%), Positives = 217/226 (96%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDASRLRSEYNRLVEGLA RGNLP+TD WL+NPALPDDILKEAVPGNIRRAEHFL V
Sbjct: 273  FKATDASRLRSEYNRLVEGLALRGNLPITDTWLSNPALPDDILKEAVPGNIRRAEHFLHV 332

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYL+GRL+T+NVE E PV FVAS++S AGIDQK LKFCYDRLHSLMLTLEITDTD
Sbjct: 333  LRRLVQYLRGRLETDNVEKESPVGFVASISSHAGIDQKTLKFCYDRLHSLMLTLEITDTD 392

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATL+GTY RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 393  EFLHIQTICDFATLIGTYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 452

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRG
Sbjct: 453  SVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRG 498



 Score =  395 bits (1015), Expect(2) = 0.0
 Identities = 196/280 (70%), Positives = 225/280 (80%)
 Frame = +2

Query: 65  QLEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLAR 244
           Q+ED+TVYFPYDHIYPEQY+YM++LKRALDA+GHCLLEMPTGTGKT ALLSLITSYSL++
Sbjct: 4   QIEDVTVYFPYDHIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYSLSK 63

Query: 245 PSDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNP 424
           P  P KL+YCTRTVHEMEKTLAE++LLH                         KNLCVNP
Sbjct: 64  PQSPIKLIYCTRTVHEMEKTLAELKLLHNYQIKH----LGPQARILAIGLSSRKNLCVNP 119

Query: 425 AALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPP 604
             L+A  RDSVD+ CR+LTASWVR+ AAE P   VP C FFENY   + +      +LPP
Sbjct: 120 TVLAAENRDSVDAGCRKLTASWVRAMAAENP--NVPTCQFFENYEKAASAA-----VLPP 172

Query: 605 GVYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVV 784
           GVYTLQDLR +GKEKG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQ+E VVV
Sbjct: 173 GVYTLQDLRAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232

Query: 785 FDEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           FDEAHNIDNVCIEALSVSVR+QTL+GATRNLN+++QEIDR
Sbjct: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLNRISQEIDR 272


>ref|XP_021279539.1| DNA repair helicase XPD [Herrania umbratica]
          Length = 758

 Score =  424 bits (1089), Expect(2) = 0.0
 Identities = 205/226 (90%), Positives = 217/226 (96%)
 Frame = +3

Query: 909  FKATDASRLRSEYNRLVEGLAQRGNLPLTDAWLANPALPDDILKEAVPGNIRRAEHFLSV 1088
            FKATDASRLRSEYNRLVEGLA RGNLP+TD WL+NPALPDDILKEAVPGNIRRAEHFL V
Sbjct: 273  FKATDASRLRSEYNRLVEGLALRGNLPITDTWLSNPALPDDILKEAVPGNIRRAEHFLHV 332

Query: 1089 LRRLVQYLKGRLQTENVETEGPVAFVASVNSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 1268
            LRRLVQYL+GRL+T+NVE E PV FVAS++S AGIDQK LKFCYDRLHSLMLTLEITDTD
Sbjct: 333  LRRLVQYLRGRLETDNVEKESPVGFVASISSHAGIDQKTLKFCYDRLHSLMLTLEITDTD 392

Query: 1269 EFLHIQTVCDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 1448
            EFLHIQT+CDFATL+GTY RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ
Sbjct: 393  EFLHIQTICDFATLIGTYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQ 452

Query: 1449 SVIITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG 1586
            SV+ITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRG
Sbjct: 453  SVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRG 498



 Score =  394 bits (1013), Expect(2) = 0.0
 Identities = 196/279 (70%), Positives = 224/279 (80%)
 Frame = +2

Query: 68  LEDITVYFPYDHIYPEQYAYMLDLKRALDARGHCLLEMPTGTGKTAALLSLITSYSLARP 247
           +ED+TVYFPYDHIYPEQY+YM++LKRALDARGHCLLEMPTGTGKT ALLSLITSYSL++P
Sbjct: 5   IEDVTVYFPYDHIYPEQYSYMIELKRALDARGHCLLEMPTGTGKTIALLSLITSYSLSKP 64

Query: 248 SDPTKLLYCTRTVHEMEKTLAEIRLLHQTLASDPXXXXXXXXXXXXXXXXXXKNLCVNPA 427
             P KL+YCTRTVHEMEKTLAE++LLH                         KNLCVNP 
Sbjct: 65  QSPIKLIYCTRTVHEMEKTLAELKLLHNYQIKH----LGPQARILAIGLSSRKNLCVNPT 120

Query: 428 ALSASTRDSVDSACRRLTASWVRSAAAERPPGEVPLCSFFENYTALSDSGGPDSVMLPPG 607
            L+A  RDSVD+ CR+LTASWVR+ AAE P   VP C FFENY   + +      +LPPG
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAMAAENP--NVPTCQFFENYEKAASAA-----VLPPG 173

Query: 608 VYTLQDLRQYGKEKGMCPYFLARQMIKYANVVVYSYQYLLDPKVAGIISREMQRECVVVF 787
           VYTLQDLR +GKEKG CPYFLAR M+++ANVVVYSYQYLLDPKVAGIIS+EMQ+E VVVF
Sbjct: 174 VYTLQDLRAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233

Query: 788 DEAHNIDNVCIEALSVSVRKQTLDGATRNLNKMAQEIDR 904
           DEAHNIDNVCIEALSVSVR+QTL+GATRNLN+++QEIDR
Sbjct: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLNRISQEIDR 272