BLASTX nr result

ID: Ophiopogon24_contig00006536 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006536
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259177.1| nuclear-pore anchor [Asparagus officinalis]        77   2e-18
gb|ONK76779.1| uncharacterized protein A4U43_C03F32060 [Asparagu...    77   2e-18

>ref|XP_020259177.1| nuclear-pore anchor [Asparagus officinalis]
          Length = 2046

 Score = 76.6 bits (187), Expect(2) = 2e-18
 Identities = 47/91 (51%), Positives = 56/91 (61%)
 Frame = +2

Query: 167  DQGAAPDSSQSPQRSTVLKVNDQAAPDSAQSHQKNAAAQEGLLASLRQXXXXXXXXXXXX 346
            DQGA PDSSQSPQ+ TVL  +DQ+AP   QS Q++ A +EG  AS+ Q            
Sbjct: 1921 DQGA-PDSSQSPQKPTVLNSSDQSAP---QSPQRSVAVREGSPASVPQSSVSERRSPSPN 1976

Query: 347  XXXXATEMDEPAATRGGGRTITIADRARENA 439
                 TE DE A TR GGRTI+I +RARENA
Sbjct: 1977 RSVVPTETDEHAQTRSGGRTISITERARENA 2007



 Score = 43.1 bits (100), Expect(2) = 2e-18
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +3

Query: 42   ATEVASPEIPTDRSEEVDAIEDIAETSDQHRGSN 143
            ATEVASPE   +R++EVDA ED  E+SD+H  +N
Sbjct: 1886 ATEVASPEAVAERNDEVDATEDDTESSDKHNVNN 1919


>gb|ONK76779.1| uncharacterized protein A4U43_C03F32060 [Asparagus officinalis]
          Length = 2000

 Score = 76.6 bits (187), Expect(2) = 2e-18
 Identities = 47/91 (51%), Positives = 56/91 (61%)
 Frame = +2

Query: 167  DQGAAPDSSQSPQRSTVLKVNDQAAPDSAQSHQKNAAAQEGLLASLRQXXXXXXXXXXXX 346
            DQGA PDSSQSPQ+ TVL  +DQ+AP   QS Q++ A +EG  AS+ Q            
Sbjct: 1875 DQGA-PDSSQSPQKPTVLNSSDQSAP---QSPQRSVAVREGSPASVPQSSVSERRSPSPN 1930

Query: 347  XXXXATEMDEPAATRGGGRTITIADRARENA 439
                 TE DE A TR GGRTI+I +RARENA
Sbjct: 1931 RSVVPTETDEHAQTRSGGRTISITERARENA 1961



 Score = 43.1 bits (100), Expect(2) = 2e-18
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +3

Query: 42   ATEVASPEIPTDRSEEVDAIEDIAETSDQHRGSN 143
            ATEVASPE   +R++EVDA ED  E+SD+H  +N
Sbjct: 1840 ATEVASPEAVAERNDEVDATEDDTESSDKHNVNN 1873


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