BLASTX nr result

ID: Ophiopogon24_contig00006302 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00006302
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPR96083.1| hypothetical protein GOBAR_AA24585 [Gossypium bar...    53   5e-06

>gb|PPR96083.1| hypothetical protein GOBAR_AA24585 [Gossypium barbadense]
          Length = 132

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 26/39 (66%)
 Frame = +2

Query: 2   RNFEFELVSPFPEIDWNAXXXXXXXXXXXXYKRRKLSAD 118
           RNFEFELVSPFPEIDWNA            YKRR+LS D
Sbjct: 94  RNFEFELVSPFPEIDWNAMVVGVKGKVMVRYKRRQLSVD 132


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