BLASTX nr result
ID: Ophiopogon24_contig00006298
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00006298
(749 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As... 446 e-142
emb|CDP14969.1| unnamed protein product [Coffea canephora] >gi|6... 404 e-140
ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-lik... 408 e-138
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [... 404 e-138
gb|KVH98536.1| Aspartate decarboxylase-like domain-containing pr... 409 e-137
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso... 433 e-137
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso... 433 e-137
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 433 e-137
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 431 e-137
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 432 e-137
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras... 401 e-136
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se... 414 e-136
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 431 e-136
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An... 430 e-136
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt... 398 e-135
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De... 429 e-135
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos... 426 e-134
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 423 e-133
gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna ... 401 e-133
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend... 418 e-133
>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 446 bits (1148), Expect = e-142
Identities = 220/238 (92%), Positives = 222/238 (93%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKV GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKKKCAGG EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 181 IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 238
>emb|CDP14969.1| unnamed protein product [Coffea canephora]
emb|CDP01841.1| unnamed protein product [Coffea canephora]
Length = 295
Score = 404 bits (1037), Expect = e-140
Identities = 196/238 (82%), Positives = 210/238 (88%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMASMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDPK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQAL+IRNPKNRLK+I DACK+K KC GG EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGG-DEIDVQGQDSEEPVKKTRGGCGAQQPKLT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYK KKK+DD EQLPEPVERKQQLSAE+VLS+LKRISDEDC LLG NPK
Sbjct: 180 IDGMKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGFNPK 237
>ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-like [Herrania umbratica]
Length = 545
Score = 408 bits (1049), Expect = e-138
Identities = 199/238 (83%), Positives = 213/238 (89%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKI+NPKNRLK+I DACK+K KC GG EPVKK RGGCGAQQP ++
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGG-DEIDVQGQDTEEPVKKSRGGCGAQQPKLS 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKM+AEYK +K++DD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 IDGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPK 237
>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
Length = 460
Score = 404 bits (1039), Expect = e-138
Identities = 198/238 (83%), Positives = 212/238 (89%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETM GKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMMGGKPKVAGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEEDHK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLK+I DACK+K KC GG EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGG-DEIDVQGQESEEPVKKSRGGCGAQQPKLT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPK 237
>gb|KVH98536.1| Aspartate decarboxylase-like domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 649
Score = 409 bits (1052), Expect = e-137
Identities = 203/238 (85%), Positives = 210/238 (88%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EHGET ERGKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQA KIRNPKNRLK+I DACKSK KC GG EPVKK RGGCGAQQP IT
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKSKSKCEGG-DEIDSQNQDTDEPVKKSRGGCGAQQPKIT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
I+GMKMVAEYK KKKSDD EQLPEP ERKQQLSAERVLSVLKRISDEDC+LLGLNPK
Sbjct: 180 IEGMKMVAEYKLQKKKSDDSEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNPK 237
>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
equestris]
Length = 1827
Score = 433 bits (1114), Expect = e-137
Identities = 214/238 (89%), Positives = 217/238 (91%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKKKCAGG EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPK 238
>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
equestris]
Length = 1827
Score = 433 bits (1114), Expect = e-137
Identities = 214/238 (89%), Positives = 217/238 (91%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKKKCAGG EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPK 238
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 433 bits (1114), Expect = e-137
Identities = 211/238 (88%), Positives = 219/238 (92%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPK+RLKRIYDACK+KKKCAGG EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PK
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPK 238
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 431 bits (1109), Expect = e-137
Identities = 211/238 (88%), Positives = 218/238 (91%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPK+RLKRIYDACK+KKKCAGG EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPK 238
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 432 bits (1112), Expect = e-137
Identities = 211/238 (88%), Positives = 219/238 (92%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPK+RLKRIYDACK+KKKCAGG EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PK
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPK 238
>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
Length = 460
Score = 401 bits (1030), Expect = e-136
Identities = 196/238 (82%), Positives = 211/238 (88%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETM GKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMMGGKPKVAGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLK+I DACK+K KC GG EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKAKCEGG-DEIDVQGQESEEPVKKSRGGCGAQQPKLT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPK 237
>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
Length = 860
Score = 414 bits (1063), Expect = e-136
Identities = 202/238 (84%), Positives = 215/238 (90%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKK CAGG EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 431 bits (1107), Expect = e-136
Identities = 211/238 (88%), Positives = 217/238 (91%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK GLSDPRLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEED R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKKKC+GG EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYKAPKKKSD+ EQLPEP ERKQ LSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPK 238
>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
Length = 1854
Score = 430 bits (1105), Expect = e-136
Identities = 210/238 (88%), Positives = 218/238 (91%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKK+CAGG EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
+DGMKMVAE+KA KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 181 VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 238
>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
Length = 452
Score = 398 bits (1023), Expect = e-135
Identities = 193/238 (81%), Positives = 212/238 (89%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFP+SPAEV+KVR VQFGILSPDEIRQM+VVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVSKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE D +
Sbjct: 61 DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADENDHK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQAL+I+NPKNRL++I DACK+K KC GG EPVKK RGGCGAQQP IT
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGG-DDIDLPGQDTEEPVKKSRGGCGAQQPKIT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPK
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPK 237
>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
Length = 1841
Score = 429 bits (1103), Expect = e-135
Identities = 210/238 (88%), Positives = 216/238 (90%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADEED R
Sbjct: 61 DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRLKRIYDACKSKKKCAGG EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 181 VDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISDEDCQLLGLNPK 238
>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
Length = 1806
Score = 426 bits (1096), Expect = e-134
Identities = 208/238 (87%), Positives = 215/238 (90%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
M+ RF YSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 METRFAYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKAGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDDTR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPKNRL+RIYDACKSKKKCAGG EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPK 238
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 423 bits (1088), Expect = e-133
Identities = 206/238 (86%), Positives = 217/238 (91%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FKQALKIRNPK+RLKRI DACKSKKKCAGG EP+KK RGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
IDGMKMVAEYKAPKKKSDD +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP+
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQ 238
>gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna angularis]
Length = 725
Score = 401 bits (1030), Expect = e-133
Identities = 197/238 (82%), Positives = 210/238 (88%)
Frame = +1
Query: 34 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 213
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 214 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 393
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKILADE D +
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 394 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXXEPVKKIRGGCGAQQPNIT 573
FK AL+IRNPKNRLK+I DACK+K KC GG EPVKK RGGCGAQQP IT
Sbjct: 121 FKLALRIRNPKNRLKKILDACKNKGKCEGG-DEIDIPGQDTDEPVKKSRGGCGAQQPKIT 179
Query: 574 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 747
I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPK
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPK 237
>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
Length = 1516
Score = 418 bits (1075), Expect = e-133
Identities = 211/260 (81%), Positives = 217/260 (83%), Gaps = 19/260 (7%)
Frame = +1
Query: 25 SYTMDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRL 204
S MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRL
Sbjct: 41 SVDMDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRL 100
Query: 205 GTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE- 381
GTIDRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADE
Sbjct: 101 GTIDRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEL 160
Query: 382 ------------------EDARFKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXX 507
ED RFKQALKIRNPKNRLKRIYDACKSKKKCAGG
Sbjct: 161 YLFSCLAISLLTSIAFSQEDTRFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQ 220
Query: 508 XXXXEPVKKIRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERV 687
EP+KK RGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERV
Sbjct: 221 QDSEEPIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERV 280
Query: 688 LSVLKRISDEDCLLLGLNPK 747
LSVLKRISDEDC LLGLNPK
Sbjct: 281 LSVLKRISDEDCQLLGLNPK 300